FFCP PHASE1:Hg19::chr18:29172884..29172921,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7276|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=12405|TSSclassifier=S|UniProt=P02766|association_with_transcript=6bp_to_M11714_5end|coexpression_cluster_id=C160|description=CAGE_peak_2_at_TTR_5end|id=chr18:29172884..29172921,+|ontology_enrichment_celltype=CL:0000181!1.06e-10!12;CL:0000417!1.06e-10!12;CL:0000668!1.06e-10!12;CL:0000414!1.06e-10!12;CL:0000412!1.06e-10!12;CL:0000182!1.06e-10!12|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.57e-09;3!UBERON:0006222;1.00e-07;1!UBERON:0005425;1.54e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.28e-18!86;UBERON:0000073!5.61e-18!94;UBERON:0001016!5.61e-18!94;UBERON:0007023!1.70e-15!115;UBERON:0001017!1.57e-14!82;UBERON:0000955!8.28e-13!69;UBERON:0006238!8.28e-13!69;UBERON:0001049!8.57e-13!57;UBERON:0005068!8.57e-13!57;UBERON:0006241!8.57e-13!57;UBERON:0007135!8.57e-13!57;UBERON:0001896!9.14e-13!3;UBERON:0005290!9.14e-13!3;UBERON:0010096!9.14e-13!3;UBERON:0003075!2.05e-12!86;UBERON:0007284!2.05e-12!86;UBERON:0002346!1.17e-11!90;UBERON:0002107!1.31e-11!19;UBERON:0006925!1.31e-11!19;UBERON:0008836!1.31e-11!19;UBERON:0002368!6.39e-11!35;UBERON:0009497!1.06e-10!25;UBERON:0000015!1.06e-10!25;UBERON:0002423!1.06e-10!25;UBERON:0006235!1.06e-10!25;UBERON:0004161!1.06e-10!25;UBERON:0002616!1.11e-10!59;UBERON:0005057!3.91e-10!26;UBERON:0008835!7.73e-10!22;UBERON:0003894!7.73e-10!22;UBERON:0000949!1.44e-09!45;UBERON:0009854!2.37e-09!23;UBERON:0001905!4.36e-09!2;UBERON:0002757!4.36e-09!2;UBERON:0010134!4.36e-09!2;UBERON:0002784!4.36e-09!2;UBERON:0005408!4.36e-09!2;UBERON:0001899!4.36e-09!2;UBERON:0001894!6.72e-09!7;UBERON:0006222!6.72e-09!7;UBERON:0003929!8.04e-09!54;UBERON:0005162!1.10e-08!2;UBERON:0000122!1.10e-08!2;UBERON:0003056!1.25e-08!61;UBERON:0002780!1.69e-08!41;UBERON:0001890!1.69e-08!41;UBERON:0006240!1.69e-08!41;UBERON:0007499!1.70e-08!25;UBERON:0003080!3.00e-08!42;UBERON:0000033!3.73e-08!123;UBERON:0009856!4.06e-08!26;UBERON:0002298!6.52e-08!8;UBERON:0000153!1.45e-07!129;UBERON:0007811!1.45e-07!129;UBERON:0004121!1.50e-07!169;UBERON:0000025!1.94e-07!194;UBERON:0000966!2.25e-07!5;UBERON:0005388!2.25e-07!5;UBERON:0001802!2.25e-07!5;UBERON:0004732!2.55e-07!13;UBERON:0000924!2.98e-07!173;UBERON:0006601!2.98e-07!173;UBERON:0000483!3.53e-07!309;UBERON:0000119!4.92e-07!312;UBERON:0002530!9.85e-07!59|ontology_enrichment_uberon_v019=UBERON:0001896;1.26e-20;3!UBERON:0005290;1.26e-20;3!UBERON:0001905;2.02e-14;2!UBERON:0002757;2.02e-14;2!UBERON:0010134;2.02e-14;2!UBERON:0005408;2.02e-14;2!UBERON:0001899;2.02e-14;2!UBERON:0005162;9.79e-14;2!UBERON:0000122;9.79e-14;2!UBERON:0004732;2.21e-12;13!UBERON:0002298;1.40e-10;6!UBERON:0000073;2.48e-10;53!UBERON:0002616;2.48e-10;53!UBERON:0001894;4.79e-09;7!UBERON:0004733;5.56e-09;12!UBERON:0002028;5.56e-09;12!UBERON:0002107;1.25e-08;19!UBERON:0006925;1.25e-08;19!UBERON:0000955;1.82e-08;68!UBERON:0002368;4.10e-08;33!UBERON:0002336;6.97e-08;1!UBERON:0011215;6.97e-08;1!UBERON:0001018;6.97e-08;1!UBERON:0002473;6.97e-08;1!UBERON:0005340;6.97e-08;1!UBERON:0003544;6.97e-08;1!UBERON:0005970;6.97e-08;1!UBERON:0002316;6.97e-08;1!UBERON:0001020;6.97e-08;1!UBERON:0002437;6.97e-08;1!UBERON:0003296;1.23e-07;4!UBERON:0010133;1.23e-07;4!UBERON:0002784;1.23e-07;4!UBERON:0000941;1.54e-07;1!UBERON:0001785;1.54e-07;1!UBERON:0002464;1.54e-07;1!UBERON:0004904;1.54e-07;1!UBERON:0001021;1.54e-07;1!UBERON:0002780;2.41e-07;41!UBERON:0001890;2.41e-07;41!UBERON:0001017;5.29e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.03e-20,3;UBERON:0005290,1.03e-20,3;UBERON:0010096,1.03e-20,3;UBERON:0001016,9.22e-17,89;UBERON:0001017,1.17e-16,81;UBERON:0000955,2.78e-15,68;UBERON:0006238,2.78e-15,68;UBERON:0000073,5.39e-15,53;UBERON:0002616,5.39e-15,53;UBERON:0003075,1.72e-14,82;UBERON:0007284,1.72e-14,82;UBERON:0001905,2.02e-14,2;UBERON:0002757,2.02e-14,2;UBERON:0010134,2.02e-14,2;UBERON:0005408,2.02e-14,2;UBERON:0001899,2.02e-14,2;UBERON:0011216,2.02e-14,223;UBERON:0001049,4.35e-14,56;UBERON:0005068,4.35e-14,56;UBERON:0006241,4.35e-14,56;UBERON:0007135,4.35e-14,56;UBERON:0005162,9.79e-14,2;UBERON:0000122,9.79e-14,2;UBERON:0002346,1.09e-13,86;UBERON:0004732,2.14e-12,13;UBERON:0007023,2.19e-11,114;UBERON:0010371,7.79e-11,104;UBERON:0002298,1.27e-10,6;UBERON:0003056,1.56e-10,61;UBERON:0000966,3.33e-10,6;UBERON:0005388,3.33e-10,6;UBERON:0001802,3.33e-10,6;UBERON:0004121,1.56e-09,171;UBERON:0000924,1.56e-09,171;UBERON:0006601,1.56e-09,171;UBERON:0001894,4.86e-09,7;UBERON:0006222,4.86e-09,7;UBERON:0004733,5.39e-09,12;UBERON:0002028,5.39e-09,12;UBERON:0007277,5.39e-09,12;UBERON:0002780,1.13e-08,41;UBERON:0001890,1.13e-08,41;UBERON:0003080,1.13e-08,41;UBERON:0006240,1.13e-08,41;UBERON:0002107,1.22e-08,19;UBERON:0006925,1.22e-08,19;UBERON:0008836,1.22e-08,19;UBERON:0002368,1.59e-08,35;UBERON:0010314,6.10e-08,132;UBERON:0002336,6.97e-08,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7276 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12405 | |||
|TSSclassifier=S | |||
|UniProt=P02766 | |||
|association_with_transcript=6bp_to_M11714_5end | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_2_at_TTR_5end | |||
|id=chr18:29172884..29172921,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.06e-10!12;CL:0000417!1.06e-10!12;CL:0000668!1.06e-10!12;CL:0000414!1.06e-10!12;CL:0000412!1.06e-10!12;CL:0000182!1.06e-10!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.57e-09;3!UBERON:0006222;1.00e-07;1!UBERON:0005425;1.54e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@TTR | |||
}} |
Revision as of 17:12, 11 September 2013
Short description: | p2@TTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TTR_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 6bp_to_M11714_5end |
EntrezGene: | TTR |
HGNC: | 12405 |
UniProt: | P02766 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.