FFCP PHASE1:Hg19::chr19:35521675..35521684,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6324|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10586|TSSclassifier=S|UniProt=Q07699|association_with_transcript=83bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end|coexpression_cluster_id=C72|description=CAGE_peak_8_at_SCN1B_5end|id=chr19:35521675..35521684,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;7.54e-10;1|ontology_enrichment_celltype_v019_2=CL:0002591,8.24e-10,1|ontology_enrichment_development_v019=UBERON:0010226;2.84e-10;1!UBERON:0010227;3.39e-10;1!UBERON:0004874;4.06e-10;1!UBERON:0006222;7.54e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.22e-48!115;UBERON:0001049!2.61e-28!57;UBERON:0005068!2.61e-28!57;UBERON:0006241!2.61e-28!57;UBERON:0007135!2.61e-28!57;UBERON:0000955!2.74e-28!69;UBERON:0006238!2.74e-28!69;UBERON:0001017!2.21e-27!82;UBERON:0002616!8.84e-27!59;UBERON:0005743!1.07e-26!86;UBERON:0003075!9.51e-26!86;UBERON:0007284!9.51e-26!86;UBERON:0002346!5.56e-24!90;UBERON:0000073!7.40e-23!94;UBERON:0001016!7.40e-23!94;UBERON:0003080!6.72e-20!42;UBERON:0000153!2.09e-19!129;UBERON:0007811!2.09e-19!129;UBERON:0000033!8.59e-19!123;UBERON:0002780!9.78e-19!41;UBERON:0001890!9.78e-19!41;UBERON:0006240!9.78e-19!41;UBERON:0002020!6.39e-15!34;UBERON:0003528!6.39e-15!34;UBERON:0001893!1.42e-14!34;UBERON:0003056!2.40e-14!61;UBERON:0004121!4.29e-14!169;UBERON:0002791!1.72e-13!33;UBERON:0000924!2.03e-13!173;UBERON:0006601!2.03e-13!173;UBERON:0001869!5.72e-13!32;UBERON:0002298!1.84e-12!8;UBERON:0001950!6.47e-12!20;UBERON:0000025!8.67e-12!194;UBERON:0002619!1.52e-10!22;UBERON:0004111!1.85e-10!241;UBERON:0000483!5.80e-10!309;UBERON:0000119!1.10e-09!312;UBERON:0003076!1.34e-09!15;UBERON:0003057!1.34e-09!15;UBERON:0000477!1.43e-09!286;UBERON:0000475!5.07e-09!365;UBERON:0000956!6.79e-09!25;UBERON:0000203!6.79e-09!25;UBERON:0002308!3.06e-08!9;UBERON:0000125!3.06e-08!9;UBERON:0004733!3.64e-08!12;UBERON:0002028!3.64e-08!12;UBERON:0007277!3.64e-08!12;UBERON:0000062!8.95e-08!511;UBERON:0004732!2.13e-07!13;UBERON:0000481!8.26e-07!347|ontology_enrichment_uberon_v019=UBERON:0005090;5.37e-19;2!UBERON:0001630;5.37e-19;2!UBERON:0001723;4.89e-13;3!UBERON:0001033;4.89e-13;3!UBERON:0004151;8.33e-13;3!UBERON:0001389;1.80e-10;1!UBERON:0000026;1.80e-10;1!UBERON:0008784;1.80e-10;1!UBERON:0006058;1.80e-10;1!UBERON:0003663;1.80e-10;1!UBERON:0004256;1.80e-10;1!UBERON:0004708;1.80e-10;1!UBERON:0002101;1.80e-10;1!UBERON:0004709;1.80e-10;1!UBERON:0002529;1.80e-10;1!UBERON:0010538;1.80e-10;1!UBERON:0003661;1.80e-10;1!UBERON:0010890;1.80e-10;1!UBERON:0002471;1.80e-10;1!UBERON:0001383;1.80e-10;1!UBERON:0010758;1.80e-10;1!UBERON:0010707;1.80e-10;1!UBERON:0000978;1.80e-10;1!UBERON:0002103;1.80e-10;1!UBERON:0001665;1.80e-10;1!UBERON:0003823;1.80e-10;1!UBERON:0000154;1.80e-10;1!UBERON:0010709;1.80e-10;1!UBERON:0002084;2.84e-10;1!UBERON:0002426;2.84e-10;1!UBERON:0003831;2.84e-10;1!UBERON:0003898;2.84e-10;1!UBERON:0004830;2.84e-10;1!UBERON:0002082;2.84e-10;1!UBERON:0003830;2.84e-10;1!UBERON:0005175;2.84e-10;1!UBERON:0001774;2.84e-10;1!UBERON:0001103;2.84e-10;1!UBERON:0002079;3.39e-10;1!UBERON:0000989;4.06e-10;1!UBERON:0008811;4.06e-10;1!UBERON:0002581;7.54e-10;1!UBERON:0002902;7.54e-10;1!UBERON:0001301;7.54e-10;1!UBERON:0009899;7.54e-10;1!UBERON:0001134;4.09e-09;16!UBERON:0002036;4.09e-09;16!UBERON:0002021;7.77e-08;5!UBERON:0001872;9.88e-08;5!UBERON:0002780;1.50e-07;41!UBERON:0001890;1.50e-07;41!UBERON:0000955;4.90e-07;68!UBERON:0000073;5.07e-07;53!UBERON:0002616;5.07e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.95e-24,114;UBERON:0005090,5.37e-19,2;UBERON:0001630,5.37e-19,2;UBERON:0001723,4.89e-13,3;UBERON:0001033,4.89e-13,3;UBERON:0010056,4.89e-13,3;UBERON:0004151,8.84e-13,3;UBERON:0000073,1.45e-11,53;UBERON:0002616,1.45e-11,53;UBERON:0001049,6.86e-11,56;UBERON:0005068,6.86e-11,56;UBERON:0006241,6.86e-11,56;UBERON:0007135,6.86e-11,56;UBERON:0005418,1.80e-10,1;UBERON:0001389,1.80e-10,1;UBERON:0000026,1.80e-10,1;UBERON:0008784,1.80e-10,1;UBERON:0006058,1.80e-10,1;UBERON:0003663,1.80e-10,1;UBERON:0004256,1.80e-10,1;UBERON:0004708,1.80e-10,1;UBERON:0002101,1.80e-10,1;UBERON:0004709,1.80e-10,1;UBERON:0002529,1.80e-10,1;UBERON:0010538,1.80e-10,1;UBERON:0003661,1.80e-10,1;UBERON:0010890,1.80e-10,1;UBERON:0002471,1.80e-10,1;UBERON:0001383,1.80e-10,1;UBERON:0004357,1.80e-10,1;UBERON:0004347,1.80e-10,1;UBERON:0005420,1.80e-10,1;UBERON:0005732,1.80e-10,1;UBERON:0010758,1.80e-10,1;UBERON:0010707,1.80e-10,1;UBERON:0000978,1.80e-10,1;UBERON:0002103,1.80e-10,1;UBERON:0001665,1.80e-10,1;UBERON:0003823,1.80e-10,1;UBERON:0000154,1.80e-10,1;UBERON:0010709,1.80e-10,1;UBERON:0005733,1.80e-10,1;UBERON:0005730,1.80e-10,1;UBERON:0010314,2.38e-10,132;UBERON:0002426,2.84e-10,1;UBERON:0003831,2.84e-10,1;UBERON:0003898,2.84e-10,1;UBERON:0004830,2.84e-10,1;UBERON:0003830,2.84e-10,1;UBERON:0005175,2.84e-10,1;UBERON:0001774,2.84e-10,1;UBERON:0001103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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |||
|TSSclassifier=S | |||
|UniProt=Q07699 | |||
|association_with_transcript=83bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_8_at_SCN1B_5end | |||
|id=chr19:35521675..35521684,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.54e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,8.24e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.84e-10;1!UBERON:0010227;3.39e-10;1!UBERON:0004874;4.06e-10;1!UBERON:0006222;7.54e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.22e-48!115;UBERON:0001049!2.61e-28!57;UBERON:0005068!2.61e-28!57;UBERON:0006241!2.61e-28!57;UBERON:0007135!2.61e-28!57;UBERON:0000955!2.74e-28!69;UBERON:0006238!2.74e-28!69;UBERON:0001017!2.21e-27!82;UBERON:0002616!8.84e-27!59;UBERON:0005743!1.07e-26!86;UBERON:0003075!9.51e-26!86;UBERON:0007284!9.51e-26!86;UBERON:0002346!5.56e-24!90;UBERON:0000073!7.40e-23!94;UBERON:0001016!7.40e-23!94;UBERON:0003080!6.72e-20!42;UBERON:0000153!2.09e-19!129;UBERON:0007811!2.09e-19!129;UBERON:0000033!8.59e-19!123;UBERON:0002780!9.78e-19!41;UBERON:0001890!9.78e-19!41;UBERON:0006240!9.78e-19!41;UBERON:0002020!6.39e-15!34;UBERON:0003528!6.39e-15!34;UBERON:0001893!1.42e-14!34;UBERON:0003056!2.40e-14!61;UBERON:0004121!4.29e-14!169;UBERON:0002791!1.72e-13!33;UBERON:0000924!2.03e-13!173;UBERON:0006601!2.03e-13!173;UBERON:0001869!5.72e-13!32;UBERON:0002298!1.84e-12!8;UBERON:0001950!6.47e-12!20;UBERON:0000025!8.67e-12!194;UBERON:0002619!1.52e-10!22;UBERON:0004111!1.85e-10!241;UBERON:0000483!5.80e-10!309;UBERON:0000119!1.10e-09!312;UBERON:0003076!1.34e-09!15;UBERON:0003057!1.34e-09!15;UBERON:0000477!1.43e-09!286;UBERON:0000475!5.07e-09!365;UBERON:0000956!6.79e-09!25;UBERON:0000203!6.79e-09!25;UBERON:0002308!3.06e-08!9;UBERON:0000125!3.06e-08!9;UBERON:0004733!3.64e-08!12;UBERON:0002028!3.64e-08!12;UBERON:0007277!3.64e-08!12;UBERON:0000062!8.95e-08!511;UBERON:0004732!2.13e-07!13;UBERON:0000481!8.26e-07!347 | |||
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|short_description=p8@SCN1B | |||
}} |
Revision as of 20:03, 11 September 2013
Short description: | p8@SCN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SCN1B_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 83bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 8.24e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.