FFCP PHASE1:Hg19::chr1:144932446..144932460,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9659|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15580|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc001emf.1_5end|description=CAGE_peak_18_at_PDE4DIP_5end|id=chr1:144932446..144932460,-|ontology_enrichment_celltype=CL:0000066!2.78e-12!254;CL:0000223!1.66e-10!59;CL:0002076!1.92e-10!43;CL:0002251!8.82e-08!21|ontology_enrichment_celltype_v019=CL:0000349;3.81e-09;19!CL:0002541;4.00e-07;3!CL:0002076;4.44e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,1.25e-10,253;CL:0002076,3.54e-09,42;CL:0000349,7.40e-09,19;CL:0000223,1.64e-08,58;CL:0002541,6.24e-07,3;CL:0002623,6.78e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.27e-15!106;DOID:0050687!9.20e-12!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,8.39e-10,106;DOID:0050687,5.48e-08,143|ontology_enrichment_uberon=UBERON:0004119!9.77e-13!169;UBERON:0000925!9.77e-13!169;UBERON:0006595!9.77e-13!169;UBERON:0001007!9.40e-11!155;UBERON:0001555!9.40e-11!155;UBERON:0007026!9.40e-11!155;UBERON:0004921!3.29e-09!129;UBERON:0004185!3.29e-09!129;UBERON:0005911!8.81e-09!82;UBERON:0000077!9.41e-09!130;UBERON:0001004!1.06e-08!72;UBERON:0001041!1.29e-07!98|ontology_enrichment_uberon_v019=UBERON:0005631;1.62e-12;10!UBERON:0000158;1.62e-12;10!UBERON:0000478;1.94e-08;24!UBERON:0000305;1.95e-07;7!UBERON:0003124;4.00e-07;3!UBERON:0000920;4.00e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.64e-13,14;UBERON:0000158,8.64e-13,14;UBERON:0000478,3.43e-08,24;UBERON:0004119,1.78e-07,160;UBERON:0000925,1.78e-07,160;UBERON:0006595,1.78e-07,160;UBERON:0003124,2.92e-07,7;UBERON:0000305,3.91e-07,7;UBERON:0000920,6.24e-07,3|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,2.09340350391728,1.31064823278103,1.05506791291381,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,1.83884244895785,1.50602959389125,0.369754010166788,0.309868802321207,0.142169232487422,0.293600439334847,0.553995408531877,0,0.217010870715852,0,0.647787332037959,0.257575567634187,0,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0.47296445977717,0,0.645484683583826,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0,0,0.736555271975129,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0.889509253863555,1.70692089026603,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0.263384084775077,1.37696839079683,0,0,0.167186495390678,1.62961133316795,1.89379122293893,0,0.334231370655521,0.589211814949674,0.664601683750863,0,0.25618263945135,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0.444859689486181,0.535081656179426,0,0.113309342697566,0.383220493601921,1.37450978193052,0.253019692019503,0.95569624297229,0,0.950452044448374,0.150575119077773,0.511946444617674,0,0.710331756132051,0.821127996921047,0.201606743224732,0,0.434473211648397,0,0.670700859703636,0.639312809217652,0,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.87834785693126,0.261958150995425,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0.872188104285069,0.993943903390637,0.25326102332916,0.132409180813219,0,0,0,0,1.72667283892012,0.311211035399766,0,0.326923806226917,0.302714855289863,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.567160915800105,0.538168907066586,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0,0.37223371266318,0.337552664482532,0.292311015483596,0.252433774244115,0,0,0,0,0.339121184620975,0.773043412653187,0.818238361772504,0.573609190778008,0.609868530647977,0.662648841607426,0.232387885739037,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.674338760312407,1.20505514941741,0.441175890929576,0.435758888184812,0,1.21348177344148,0.588664395376038,0,0.738155454624648,0,0.8231480226628,0,0,0,1.77236972004421,0,1.72183813960359,0.171567810298526,0,1.1240175325762,1.00528972411631,2.22212268380471,0,0,0,0,0.352226082707465,0,0,0,3.95102198979638,2.57545848628462,0,0,0,1.87467667973554,0.839910640994298,0.992425680696705,1.43293636324557,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,0.517086863031111,0,0,0,0,0.514414748524284,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0.434418072340414,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,1.66435439510497,1.209561173318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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001emf.1_5end | |||
|description=CAGE_peak_18_at_PDE4DIP_5end | |||
|id=chr1:144932446..144932460,- | |||
|ontology_enrichment_celltype=CL:0000066!2.78e-12!254;CL:0000223!1.66e-10!59;CL:0002076!1.92e-10!43;CL:0002251!8.82e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.81e-09;19!CL:0002541;4.00e-07;3!CL:0002076;4.44e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.25e-10,253;CL:0002076,3.54e-09,42;CL:0000349,7.40e-09,19;CL:0000223,1.64e-08,58;CL:0002541,6.24e-07,3;CL:0002623,6.78e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.27e-15!106;DOID:0050687!9.20e-12!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.39e-10,106;DOID:0050687,5.48e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.77e-13!169;UBERON:0000925!9.77e-13!169;UBERON:0006595!9.77e-13!169;UBERON:0001007!9.40e-11!155;UBERON:0001555!9.40e-11!155;UBERON:0007026!9.40e-11!155;UBERON:0004921!3.29e-09!129;UBERON:0004185!3.29e-09!129;UBERON:0005911!8.81e-09!82;UBERON:0000077!9.41e-09!130;UBERON:0001004!1.06e-08!72;UBERON:0001041!1.29e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.62e-12;10!UBERON:0000158;1.62e-12;10!UBERON:0000478;1.94e-08;24!UBERON:0000305;1.95e-07;7!UBERON:0003124;4.00e-07;3!UBERON:0000920;4.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.64e-13,14;UBERON:0000158,8.64e-13,14;UBERON:0000478,3.43e-08,24;UBERON:0004119,1.78e-07,160;UBERON:0000925,1.78e-07,160;UBERON:0006595,1.78e-07,160;UBERON:0003124,2.92e-07,7;UBERON:0000305,3.91e-07,7;UBERON:0000920,6.24e-07,3 | |||
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| |||
|short_description=p18@PDE4DIP | |||
}} |
Revision as of 00:01, 12 September 2013
Short description: | p18@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_PDE4DIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001emf.1_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.25e-10 | 253 |
endo-epithelial cell | 3.54e-09 | 42 |
extraembryonic cell | 7.40e-09 | 19 |
endodermal cell | 1.64e-08 | 58 |
chorionic membrane mesenchymal stem cell | 6.24e-07 | 3 |
acinar cell of salivary gland | 6.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.64e-13 | 14 |
membranous layer | 8.64e-13 | 14 |
extraembryonic structure | 3.43e-08 | 24 |
endoderm-derived structure | 1.78e-07 | 160 |
endoderm | 1.78e-07 | 160 |
presumptive endoderm | 1.78e-07 | 160 |
chorion | 2.92e-07 | 7 |
amnion | 3.91e-07 | 7 |
egg chorion | 6.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.39e-10 | 106 |
cell type cancer | 5.48e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.