FFCP PHASE1:Hg19::chr1:182641367..182641378,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=85397|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16810|TSSclassifier=S|UniProt=D6RD36|association_with_transcript=7bp_to_ENST00000508450_5end|coexpression_cluster_id=C35|description=CAGE_peak_7_at_RGS8_5end|id=chr1:182641367..182641378,-|ontology_enrichment_celltype=CL:0002319!3.83e-08!25;CL:0000133!1.08e-07!59|ontology_enrichment_celltype_v019=CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6|ontology_enrichment_celltype_v019_2=CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6|ontology_enrichment_development_v019=UBERON:0006222;5.05e-34;1!UBERON:0010122;5.48e-18;2!UBERON:0006601;4.05e-08;82!CL:0000031;8.48e-07;6|ontology_enrichment_disease=DOID:169!3.78e-08!6|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.24e-52!94;UBERON:0001016!4.24e-52!94;UBERON:0000955!3.25e-48!69;UBERON:0006238!3.25e-48!69;UBERON:0005743!2.31e-47!86;UBERON:0001017!1.79e-46!82;UBERON:0002780!1.09e-37!41;UBERON:0001890!1.09e-37!41;UBERON:0006240!1.09e-37!41;UBERON:0003080!1.03e-36!42;UBERON:0003056!2.07e-36!61;UBERON:0001049!4.20e-36!57;UBERON:0005068!4.20e-36!57;UBERON:0006241!4.20e-36!57;UBERON:0007135!4.20e-36!57;UBERON:0002616!9.89e-35!59;UBERON:0003075!2.20e-32!86;UBERON:0007284!2.20e-32!86;UBERON:0004121!3.59e-32!169;UBERON:0001893!5.95e-32!34;UBERON:0000924!2.82e-31!173;UBERON:0006601!2.82e-31!173;UBERON:0000033!3.55e-31!123;UBERON:0002346!1.05e-30!90;UBERON:0001869!7.57e-30!32;UBERON:0000153!1.91e-29!129;UBERON:0007811!1.91e-29!129;UBERON:0002791!6.58e-29!33;UBERON:0002020!2.87e-24!34;UBERON:0003528!2.87e-24!34;UBERON:0000369!1.33e-21!4;UBERON:0002435!1.33e-21!4;UBERON:0000204!1.33e-21!4;UBERON:0010082!1.33e-21!4;UBERON:0007023!3.85e-21!115;UBERON:0000200!1.01e-19!6;UBERON:0009663!1.04e-18!7;UBERON:0005383!1.31e-16!3;UBERON:0005382!1.31e-16!3;UBERON:0001950!1.51e-16!20;UBERON:0002619!5.56e-15!22;UBERON:0002771!6.16e-15!3;UBERON:0002308!1.72e-14!9;UBERON:0002420!1.72e-14!9;UBERON:0000125!1.72e-14!9;UBERON:0007245!1.72e-14!9;UBERON:0010009!1.72e-14!9;UBERON:0010011!1.72e-14!9;UBERON:0000454!1.72e-14!9;UBERON:0000956!4.41e-13!25;UBERON:0000203!4.41e-13!25;UBERON:0001873!1.26e-11!2;UBERON:0010122!1.26e-11!2;UBERON:0000013!1.08e-09!5;UBERON:0002410!1.08e-09!5;UBERON:0001871!1.19e-09!7;UBERON:0000025!3.17e-08!194;UBERON:0001896!7.39e-08!3;UBERON:0005290!7.39e-08!3;UBERON:0010096!7.39e-08!3;UBERON:0000475!1.04e-07!365;UBERON:0001894!4.46e-07!7;UBERON:0006222!4.46e-07!7|ontology_enrichment_uberon_v019=UBERON:0000369;2.58e-74;4!UBERON:0002435;2.58e-74;4!UBERON:0000204;2.58e-74;4!UBERON:0005383;7.81e-45;3!UBERON:0005382;7.81e-45;3!UBERON:0009663;6.02e-43;7!UBERON:0001882;5.05e-34;1!UBERON:0001874;5.05e-34;1!UBERON:0005403;5.05e-34;1!UBERON:0002420;1.24e-33;9!UBERON:0000125;1.24e-33;9!UBERON:0007245;1.24e-33;9!UBERON:0002308;1.24e-33;9!UBERON:0010009;1.24e-33;9!UBERON:0010011;1.24e-33;9!UBERON:0000454;1.24e-33;9!UBERON:0001873;5.48e-18;2!UBERON:0001896;2.59e-12;3!UBERON:0005290;2.59e-12;3!UBERON:0002791;1.09e-10;32!UBERON:0000073;1.47e-10;53!UBERON:0002616;1.47e-10;53!UBERON:0003528;3.71e-10;34!UBERON:0002020;3.71e-10;34!UBERON:0001869;1.26e-09;32!UBERON:0001893;1.26e-09;34!UBERON:0002780;5.55e-09;41!UBERON:0001890;5.55e-09;41!UBERON:0000349;6.55e-08;5!UBERON:0000955;1.07e-07;68!UBERON:0001017;1.35e-07;75!UBERON:0002298;8.48e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.21e-74,4;UBERON:0002435,1.21e-74,4;UBERON:0000204,1.21e-74,4;UBERON:0010082,1.21e-74,4;UBERON:0005383,6.25e-45,3;UBERON:0005382,6.25e-45,3;UBERON:0009663,3.92e-43,7;UBERON:0001882,2.58e-34,1;UBERON:0005403,2.58e-34,1;UBERON:0001874,3.61e-34,1;UBERON:0002420,8.87e-34,9;UBERON:0000125,8.87e-34,9;UBERON:0007245,8.87e-34,9;UBERON:0002308,8.87e-34,9;UBERON:0010009,8.87e-34,9;UBERON:0010011,8.87e-34,9;UBERON:0000454,8.87e-34,9;UBERON:0001873,5.48e-18,2;UBERON:0010122,5.48e-18,2;UBERON:0000073,9.39e-16,53;UBERON:0002616,9.39e-16,53;UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0001017,9.81e-15,81;UBERON:0001016,2.44e-13,89;UBERON:0002780,3.31e-13,41;UBERON:0001890,3.31e-13,41;UBERON:0003080,3.31e-13,41;UBERON:0006240,3.31e-13,41;UBERON:0000955,2.88e-12,68;UBERON:0006238,2.88e-12,68;UBERON:0001896,3.24e-12,3;UBERON:0005290,3.24e-12,3;UBERON:0010096,3.24e-12,3;UBERON:0003075,2.04e-10,82;UBERON:0007284,2.04e-10,82;UBERON:0002346,5.89e-10,86;UBERON:0002791,8.02e-10,32;UBERON:0001869,8.02e-10,32;UBERON:0003528,2.65e-09,34;UBERON:0002020,2.65e-09,34;UBERON:0001893,2.65e-09,34;UBERON:0003056,3.98e-09,61;UBERON:0010371,2.57e-08,104;UBERON:0000349,5.73e-08,5;UBERON:0007023,1.09e-07,114;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0002298,9.49e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=85397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16810 | |||
|TSSclassifier=S | |||
|UniProt=D6RD36 | |||
|association_with_transcript=7bp_to_ENST00000508450_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_7_at_RGS8_5end | |||
|id=chr1:182641367..182641378,- | |||
|ontology_enrichment_celltype=CL:0002319!3.83e-08!25;CL:0000133!1.08e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.05e-34;1!UBERON:0010122;5.48e-18;2!UBERON:0006601;4.05e-08;82!CL:0000031;8.48e-07;6 | |||
|ontology_enrichment_disease=DOID:169!3.78e-08!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.24e-52!94;UBERON:0001016!4.24e-52!94;UBERON:0000955!3.25e-48!69;UBERON:0006238!3.25e-48!69;UBERON:0005743!2.31e-47!86;UBERON:0001017!1.79e-46!82;UBERON:0002780!1.09e-37!41;UBERON:0001890!1.09e-37!41;UBERON:0006240!1.09e-37!41;UBERON:0003080!1.03e-36!42;UBERON:0003056!2.07e-36!61;UBERON:0001049!4.20e-36!57;UBERON:0005068!4.20e-36!57;UBERON:0006241!4.20e-36!57;UBERON:0007135!4.20e-36!57;UBERON:0002616!9.89e-35!59;UBERON:0003075!2.20e-32!86;UBERON:0007284!2.20e-32!86;UBERON:0004121!3.59e-32!169;UBERON:0001893!5.95e-32!34;UBERON:0000924!2.82e-31!173;UBERON:0006601!2.82e-31!173;UBERON:0000033!3.55e-31!123;UBERON:0002346!1.05e-30!90;UBERON:0001869!7.57e-30!32;UBERON:0000153!1.91e-29!129;UBERON:0007811!1.91e-29!129;UBERON:0002791!6.58e-29!33;UBERON:0002020!2.87e-24!34;UBERON:0003528!2.87e-24!34;UBERON:0000369!1.33e-21!4;UBERON:0002435!1.33e-21!4;UBERON:0000204!1.33e-21!4;UBERON:0010082!1.33e-21!4;UBERON:0007023!3.85e-21!115;UBERON:0000200!1.01e-19!6;UBERON:0009663!1.04e-18!7;UBERON:0005383!1.31e-16!3;UBERON:0005382!1.31e-16!3;UBERON:0001950!1.51e-16!20;UBERON:0002619!5.56e-15!22;UBERON:0002771!6.16e-15!3;UBERON:0002308!1.72e-14!9;UBERON:0002420!1.72e-14!9;UBERON:0000125!1.72e-14!9;UBERON:0007245!1.72e-14!9;UBERON:0010009!1.72e-14!9;UBERON:0010011!1.72e-14!9;UBERON:0000454!1.72e-14!9;UBERON:0000956!4.41e-13!25;UBERON:0000203!4.41e-13!25;UBERON:0001873!1.26e-11!2;UBERON:0010122!1.26e-11!2;UBERON:0000013!1.08e-09!5;UBERON:0002410!1.08e-09!5;UBERON:0001871!1.19e-09!7;UBERON:0000025!3.17e-08!194;UBERON:0001896!7.39e-08!3;UBERON:0005290!7.39e-08!3;UBERON:0010096!7.39e-08!3;UBERON:0000475!1.04e-07!365;UBERON:0001894!4.46e-07!7;UBERON:0006222!4.46e-07!7 | |||
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|short_description=p7@RGS8 | |||
}} |
Revision as of 02:08, 12 September 2013
Short description: | p7@RGS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RGS8_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 7bp_to_ENST00000508450_5end |
EntrezGene: | RGS8 |
HGNC: | 16810 |
UniProt: | D6RD36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.