FFCP PHASE1:Hg19::chr1:28503800..28503813,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5724|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9582|TSSclassifier=S|UniProt=P25105|association_with_transcript=-101bp_to_ENST00000373857_5end|coexpression_cluster_id=C36|description=CAGE_peak_7_at_PTAFR_5end|id=chr1:28503800..28503813,-|ontology_enrichment_celltype=CL:0000766!5.65e-31!76;CL:0000037!2.70e-30!172;CL:0000566!2.70e-30!172;CL:0000738!3.69e-30!140;CL:0002032!8.27e-30!165;CL:0000837!8.27e-30!165;CL:0000988!1.12e-27!182;CL:0000763!8.65e-27!112;CL:0000049!8.65e-27!112;CL:0000839!1.03e-22!70;CL:0002031!1.28e-22!124;CL:0000557!2.93e-22!71;CL:0002087!9.66e-21!119;CL:0002057!9.51e-18!42;CL:0002194!3.13e-17!63;CL:0000576!3.13e-17!63;CL:0000040!3.13e-17!63;CL:0000559!3.13e-17!63;CL:0002009!1.82e-16!65;CL:0000860!3.83e-16!45;CL:0002274!8.50e-12!5;CL:0000457!8.50e-12!5;CL:0002191!8.50e-12!5;CL:0000097!8.50e-12!5;CL:0000831!8.50e-12!5;CL:0002028!8.50e-12!5;CL:0000945!2.78e-10!24;CL:0000826!2.78e-10!24;CL:0000094!6.09e-10!8;CL:0000134!3.87e-08!358;CL:0000775!7.69e-08!3;CL:0002320!1.09e-07!365;CL:0000081!5.82e-07!11|ontology_enrichment_celltype_v019=CL:0000097;1.58e-33;5!CL:0000094;1.99e-21;8!CL:0000775;4.28e-21;3!CL:0000163;1.37e-18;9!CL:0000081;1.53e-15;11!CL:0000771;4.72e-15;2!CL:0000945;8.41e-10;24|ontology_enrichment_celltype_v019_2=CL:0000097,1.64e-33,5;CL:0002028,1.64e-33,5;CL:0000094,1.91e-21,8;CL:0000775,3.87e-21,3;CL:0000163,1.40e-18,9;CL:0002032,8.82e-16,161;CL:0000837,8.82e-16,161;CL:0000081,1.49e-15,11;CL:0000771,4.89e-15,2;CL:0000037,5.99e-15,168;CL:0000988,5.62e-14,177;CL:0000738,5.74e-14,136;CL:0000766,5.46e-13,72;CL:0000763,1.93e-12,108;CL:0000049,1.93e-12,108;CL:0000945,8.62e-10,24;CL:0000826,8.62e-10,24;CL:0002031,4.12e-08,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2355;2.80e-08;1|ontology_enrichment_disease_v019_2=DOID:2355,2.90e-08,1|ontology_enrichment_uberon=UBERON:0002390!1.23e-28!102;UBERON:0003061!1.23e-28!102;UBERON:0002193!6.44e-25!112;UBERON:0001474!1.82e-20!86;UBERON:0002371!1.06e-18!80;UBERON:0004765!4.82e-17!101;UBERON:0001434!4.82e-17!101;UBERON:0000178!7.59e-13!15;UBERON:0000179!7.59e-13!15;UBERON:0000463!7.59e-13!15;UBERON:0002405!6.30e-12!115;UBERON:0003081!2.32e-08!216;UBERON:0002204!3.64e-07!167;UBERON:0002384!4.38e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;2.91e-27;15!UBERON:0000179;2.91e-27;15!UBERON:0000463;2.91e-27;15!UBERON:0002390;1.41e-11;32!UBERON:0002193;9.90e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.36e-27,15;UBERON:0000179,2.36e-27,15;UBERON:0000463,2.36e-27,15;UBERON:0002390,6.27e-14,98;UBERON:0003061,6.27e-14,98;UBERON:0002193,2.31e-12,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8873626702972,16.666419658339,18.7331659526557,0,0,0.309632246632152,0,0,0,0,1.9903692548239,0,0,0.802177789880567,0.434021741431704,0,1.29557466407592,0.257575567634187,0.436194716338694,0,0,0,0,0.619412741790207,0.28769239232215,0.512321413058201,1.18241114944293,0.344745680736619,0,0,0.376484679085209,0,0.449446968890169,0,0.641858054152187,0.639337125799041,1.31940520074686,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.502497330513487,0.521482918420201,0.868755378820466,0,0,0,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.445893486866185,0,0.16798212819886,0,0,0,0,1.97065295158377,6.51558411697873,2.28060927094849,3.45887888200707,4.16600030307054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74503511973591,11.966458368161,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,3.82318603571188,2.27858874869665,2.62054953003568,2.87953591160336,3.24236655596359,2.70015718619057,2.37937552888281,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0.684704037099577,0,0,0,3.53293765228139,1.21079824314629,0.425846237690326,0,0.307240764308458,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.21552649829925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72678282034527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5724 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |||
|TSSclassifier=S | |||
|UniProt=P25105 | |||
|association_with_transcript=-101bp_to_ENST00000373857_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_7_at_PTAFR_5end | |||
|id=chr1:28503800..28503813,- | |||
|ontology_enrichment_celltype=CL:0000766!5.65e-31!76;CL:0000037!2.70e-30!172;CL:0000566!2.70e-30!172;CL:0000738!3.69e-30!140;CL:0002032!8.27e-30!165;CL:0000837!8.27e-30!165;CL:0000988!1.12e-27!182;CL:0000763!8.65e-27!112;CL:0000049!8.65e-27!112;CL:0000839!1.03e-22!70;CL:0002031!1.28e-22!124;CL:0000557!2.93e-22!71;CL:0002087!9.66e-21!119;CL:0002057!9.51e-18!42;CL:0002194!3.13e-17!63;CL:0000576!3.13e-17!63;CL:0000040!3.13e-17!63;CL:0000559!3.13e-17!63;CL:0002009!1.82e-16!65;CL:0000860!3.83e-16!45;CL:0002274!8.50e-12!5;CL:0000457!8.50e-12!5;CL:0002191!8.50e-12!5;CL:0000097!8.50e-12!5;CL:0000831!8.50e-12!5;CL:0002028!8.50e-12!5;CL:0000945!2.78e-10!24;CL:0000826!2.78e-10!24;CL:0000094!6.09e-10!8;CL:0000134!3.87e-08!358;CL:0000775!7.69e-08!3;CL:0002320!1.09e-07!365;CL:0000081!5.82e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.58e-33;5!CL:0000094;1.99e-21;8!CL:0000775;4.28e-21;3!CL:0000163;1.37e-18;9!CL:0000081;1.53e-15;11!CL:0000771;4.72e-15;2!CL:0000945;8.41e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.64e-33,5;CL:0002028,1.64e-33,5;CL:0000094,1.91e-21,8;CL:0000775,3.87e-21,3;CL:0000163,1.40e-18,9;CL:0002032,8.82e-16,161;CL:0000837,8.82e-16,161;CL:0000081,1.49e-15,11;CL:0000771,4.89e-15,2;CL:0000037,5.99e-15,168;CL:0000988,5.62e-14,177;CL:0000738,5.74e-14,136;CL:0000766,5.46e-13,72;CL:0000763,1.93e-12,108;CL:0000049,1.93e-12,108;CL:0000945,8.62e-10,24;CL:0000826,8.62e-10,24;CL:0002031,4.12e-08,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;2.80e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.90e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-28!102;UBERON:0003061!1.23e-28!102;UBERON:0002193!6.44e-25!112;UBERON:0001474!1.82e-20!86;UBERON:0002371!1.06e-18!80;UBERON:0004765!4.82e-17!101;UBERON:0001434!4.82e-17!101;UBERON:0000178!7.59e-13!15;UBERON:0000179!7.59e-13!15;UBERON:0000463!7.59e-13!15;UBERON:0002405!6.30e-12!115;UBERON:0003081!2.32e-08!216;UBERON:0002204!3.64e-07!167;UBERON:0002384!4.38e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.91e-27;15!UBERON:0000179;2.91e-27;15!UBERON:0000463;2.91e-27;15!UBERON:0002390;1.41e-11;32!UBERON:0002193;9.90e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.36e-27,15;UBERON:0000179,2.36e-27,15;UBERON:0000463,2.36e-27,15;UBERON:0002390,6.27e-14,98;UBERON:0003061,6.27e-14,98;UBERON:0002193,2.31e-12,108 | |||
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|short_description=p7@PTAFR | |||
}} |
Revision as of 05:07, 12 September 2013
Short description: | p7@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -101bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.64e-33 | 5 |
basophil mast progenitor cell | 1.64e-33 | 5 |
granulocyte | 1.91e-21 | 8 |
neutrophil | 3.87e-21 | 3 |
endocrine cell | 1.40e-18 | 9 |
hematopoietic oligopotent progenitor cell | 8.82e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.82e-16 | 161 |
blood cell | 1.49e-15 | 11 |
eosinophil | 4.89e-15 | 2 |
hematopoietic stem cell | 5.99e-15 | 168 |
hematopoietic cell | 5.62e-14 | 177 |
leukocyte | 5.74e-14 | 136 |
myeloid leukocyte | 5.46e-13 | 72 |
myeloid cell | 1.93e-12 | 108 |
common myeloid progenitor | 1.93e-12 | 108 |
lymphocyte of B lineage | 8.62e-10 | 24 |
pro-B cell | 8.62e-10 | 24 |
hematopoietic lineage restricted progenitor cell | 4.12e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 2.36e-27 | 15 |
haemolymphatic fluid | 2.36e-27 | 15 |
organism substance | 2.36e-27 | 15 |
hematopoietic system | 6.27e-14 | 98 |
blood island | 6.27e-14 | 98 |
hemolymphoid system | 2.31e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.90e-08 | 1 |
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