FFCP PHASE1:Hg19::chr1:70033964..70033965,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57554|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18531|TSSclassifier=S|UniProt=|association_with_transcript=-115bp_to_ENST00000310961_5end|coexpression_cluster_id=C10|description=CAGE_peak_23_at_LRRC7_5end|id=chr1:70033964..70033965,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!3.60e-85!32;UBERON:0001893!6.10e-80!34;UBERON:0002020!9.98e-80!34;UBERON:0003528!9.98e-80!34;UBERON:0002791!4.69e-76!33;UBERON:0002619!1.77e-72!22;UBERON:0002780!7.30e-71!41;UBERON:0001890!7.30e-71!41;UBERON:0006240!7.30e-71!41;UBERON:0001049!1.54e-70!57;UBERON:0005068!1.54e-70!57;UBERON:0006241!1.54e-70!57;UBERON:0007135!1.54e-70!57;UBERON:0003080!4.61e-69!42;UBERON:0001950!3.91e-64!20;UBERON:0000956!1.52e-63!25;UBERON:0000203!1.52e-63!25;UBERON:0002616!3.21e-59!59;UBERON:0000955!2.33e-52!69;UBERON:0006238!2.33e-52!69;UBERON:0001017!1.76e-49!82;UBERON:0005743!6.92e-47!86;UBERON:0003056!6.92e-46!61;UBERON:0003075!1.51e-44!86;UBERON:0007284!1.51e-44!86;UBERON:0002346!2.92e-42!90;UBERON:0000073!7.85e-42!94;UBERON:0001016!7.85e-42!94;UBERON:0007023!3.94e-31!115;UBERON:0000033!1.20e-28!123;UBERON:0000153!5.41e-27!129;UBERON:0007811!5.41e-27!129;UBERON:0001871!6.99e-26!7;UBERON:0000200!8.21e-26!6;UBERON:0004121!2.79e-20!169;UBERON:0000924!1.20e-19!173;UBERON:0006601!1.20e-19!173;UBERON:0000025!2.29e-18!194;UBERON:0002420!1.51e-17!9;UBERON:0007245!1.51e-17!9;UBERON:0010009!1.51e-17!9;UBERON:0010011!1.51e-17!9;UBERON:0000454!1.51e-17!9;UBERON:0002308!2.20e-17!9;UBERON:0000125!2.20e-17!9;UBERON:0009663!4.12e-16!7;UBERON:0002021!6.70e-15!5;UBERON:0000349!1.10e-14!5;UBERON:0001872!2.35e-14!5;UBERON:0004111!2.36e-14!241;UBERON:0002771!2.66e-13!3;UBERON:0000477!9.21e-13!286;UBERON:0000369!3.82e-11!4;UBERON:0002435!3.82e-11!4;UBERON:0000204!3.82e-11!4;UBERON:0010082!3.82e-11!4;UBERON:0000064!4.89e-11!219;UBERON:0001870!3.32e-10!2;UBERON:0001954!4.34e-10!2;UBERON:0003022!4.34e-10!2;UBERON:0002421!4.34e-10!2;UBERON:0002600!4.34e-10!2;UBERON:0001875!1.05e-09!2;UBERON:0006514!1.05e-09!2;UBERON:0000475!1.10e-09!365;UBERON:0000483!1.65e-09!309;UBERON:0000119!2.41e-09!312;UBERON:0005383!3.22e-07!3;UBERON:0005382!3.22e-07!3;UBERON:0000481!7.25e-07!347;UBERON:0003076!8.91e-07!15;UBERON:0003057!8.91e-07!15|ontology_enrichment_uberon_v019=UBERON:0001874;3.99e-50;1!UBERON:0002791;5.11e-24;32!UBERON:0003528;1.49e-22;34!UBERON:0002020;1.49e-22;34!UBERON:0001950;4.76e-22;20!UBERON:0001869;9.56e-22;32!UBERON:0002619;3.18e-20;22!UBERON:0000956;5.19e-18;25!UBERON:0000203;5.19e-18;25!UBERON:0001893;7.60e-18;34!UBERON:0005383;9.45e-18;3!UBERON:0005382;9.45e-18;3!UBERON:0002780;3.90e-14;41!UBERON:0001890;3.90e-14;41!UBERON:0000369;1.13e-13;4!UBERON:0002435;1.13e-13;4!UBERON:0000204;1.13e-13;4!UBERON:0002021;2.66e-11;5!UBERON:0001872;3.26e-11;5!UBERON:0000073;2.06e-10;53!UBERON:0002616;2.06e-10;53!UBERON:0000922;4.35e-10;49!UBERON:0001016;1.94e-08;83!UBERON:0001871;2.18e-08;6!UBERON:0009663;2.18e-08;7!UBERON:0000955;5.98e-07;68!UBERON:0002420;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.42e-50,1;UBERON:0002791,9.87e-25,32;UBERON:0001869,9.87e-25,32;UBERON:0003528,2.23e-23,34;UBERON:0002020,2.23e-23,34;UBERON:0001893,2.23e-23,34;UBERON:0001950,5.11e-22,20;UBERON:0002619,3.39e-20,22;UBERON:0002780,1.19e-19,41;UBERON:0001890,1.19e-19,41;UBERON:0003080,1.19e-19,41;UBERON:0006240,1.19e-19,41;UBERON:0000956,5.50e-18,25;UBERON:0000203,5.50e-18,25;UBERON:0005383,8.00e-18,3;UBERON:0005382,8.00e-18,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000369,1.00e-13,4;UBERON:0002435,1.00e-13,4;UBERON:0000204,1.00e-13,4;UBERON:0010082,1.00e-13,4;UBERON:0003056,1.29e-13,61;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002021,2.66e-11,5;UBERON:0001872,3.60e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0001016,1.88e-09,89;UBERON:0009663,2.03e-08,7;UBERON:0001871,2.18e-08,6;UBERON:0010371,2.22e-08,104;UBERON:0002420,7.91e-07,9;UBERON:0000125,7.91e-07,9;UBERON:0007245,7.91e-07,9;UBERON:0002308,7.91e-07,9;UBERON:0010009,7.91e-07,9;UBERON:0010011,7.91e-07,9;UBERON:0000454,7.91e-07,9;UBERON:0010314,8.99e-07,132|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57554 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-115bp_to_ENST00000310961_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_23_at_LRRC7_5end | |||
|id=chr1:70033964..70033965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.60e-85!32;UBERON:0001893!6.10e-80!34;UBERON:0002020!9.98e-80!34;UBERON:0003528!9.98e-80!34;UBERON:0002791!4.69e-76!33;UBERON:0002619!1.77e-72!22;UBERON:0002780!7.30e-71!41;UBERON:0001890!7.30e-71!41;UBERON:0006240!7.30e-71!41;UBERON:0001049!1.54e-70!57;UBERON:0005068!1.54e-70!57;UBERON:0006241!1.54e-70!57;UBERON:0007135!1.54e-70!57;UBERON:0003080!4.61e-69!42;UBERON:0001950!3.91e-64!20;UBERON:0000956!1.52e-63!25;UBERON:0000203!1.52e-63!25;UBERON:0002616!3.21e-59!59;UBERON:0000955!2.33e-52!69;UBERON:0006238!2.33e-52!69;UBERON:0001017!1.76e-49!82;UBERON:0005743!6.92e-47!86;UBERON:0003056!6.92e-46!61;UBERON:0003075!1.51e-44!86;UBERON:0007284!1.51e-44!86;UBERON:0002346!2.92e-42!90;UBERON:0000073!7.85e-42!94;UBERON:0001016!7.85e-42!94;UBERON:0007023!3.94e-31!115;UBERON:0000033!1.20e-28!123;UBERON:0000153!5.41e-27!129;UBERON:0007811!5.41e-27!129;UBERON:0001871!6.99e-26!7;UBERON:0000200!8.21e-26!6;UBERON:0004121!2.79e-20!169;UBERON:0000924!1.20e-19!173;UBERON:0006601!1.20e-19!173;UBERON:0000025!2.29e-18!194;UBERON:0002420!1.51e-17!9;UBERON:0007245!1.51e-17!9;UBERON:0010009!1.51e-17!9;UBERON:0010011!1.51e-17!9;UBERON:0000454!1.51e-17!9;UBERON:0002308!2.20e-17!9;UBERON:0000125!2.20e-17!9;UBERON:0009663!4.12e-16!7;UBERON:0002021!6.70e-15!5;UBERON:0000349!1.10e-14!5;UBERON:0001872!2.35e-14!5;UBERON:0004111!2.36e-14!241;UBERON:0002771!2.66e-13!3;UBERON:0000477!9.21e-13!286;UBERON:0000369!3.82e-11!4;UBERON:0002435!3.82e-11!4;UBERON:0000204!3.82e-11!4;UBERON:0010082!3.82e-11!4;UBERON:0000064!4.89e-11!219;UBERON:0001870!3.32e-10!2;UBERON:0001954!4.34e-10!2;UBERON:0003022!4.34e-10!2;UBERON:0002421!4.34e-10!2;UBERON:0002600!4.34e-10!2;UBERON:0001875!1.05e-09!2;UBERON:0006514!1.05e-09!2;UBERON:0000475!1.10e-09!365;UBERON:0000483!1.65e-09!309;UBERON:0000119!2.41e-09!312;UBERON:0005383!3.22e-07!3;UBERON:0005382!3.22e-07!3;UBERON:0000481!7.25e-07!347;UBERON:0003076!8.91e-07!15;UBERON:0003057!8.91e-07!15 | |||
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|short_description=p23@LRRC7 | |||
}} |
Revision as of 06:38, 12 September 2013
Short description: | p23@LRRC7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -115bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.