FFCP PHASE1:Hg19::chr20:30192985..30192997,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:30192985..30192997,-|id=chr20:30192985..30192997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000515;8.18e-10;3!CL:0002616;1.90e-08;1!CL:0002581;5.58e-08;1!CL:0000056;1.43e-07;4|ontology_enrichment_celltype_v019_2=CL:0002616,2.04e-08,1;CL:0002581,4.71e-08,1;CL:0000515,2.60e-07,4|ontology_enrichment_development_v019=UBERON:0005754;1.90e-08;1!UBERON:0009143;5.58e-08;1!UBERON:0003099;5.58e-08;1!UBERON:0003852;5.58e-08;1!CL:0000515;1.43e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.18e-13!115;UBERON:0000475!2.94e-09!365;UBERON:0001049!1.63e-07!57;UBERON:0005068!1.63e-07!57;UBERON:0006241!1.63e-07!57;UBERON:0007135!1.63e-07!57;UBERON:0000481!1.64e-07!347;UBERON:0002616!6.36e-07!59|ontology_enrichment_uberon_v019=UBERON:0005406;1.00e-14;2!UBERON:0000007;1.19e-14;2!UBERON:0000998;1.90e-08;1!UBERON:0006868;1.90e-08;1!UBERON:0002336;5.58e-08;1!UBERON:0000996;5.58e-08;1!UBERON:0005705;5.58e-08;1!UBERON:0011215;5.58e-08;1!UBERON:0001018;5.58e-08;1!UBERON:0008193;5.58e-08;1!UBERON:0010912;5.58e-08;1!UBERON:0002514;5.58e-08;1!UBERON:0003457;5.58e-08;1!UBERON:0002473;5.58e-08;1!UBERON:0005340;5.58e-08;1!UBERON:0008907;5.58e-08;1!UBERON:0008001;5.58e-08;1!UBERON:0003544;5.58e-08;1!UBERON:0005970;5.58e-08;1!UBERON:0007213;5.58e-08;1!UBERON:0009891;5.58e-08;1!UBERON:0007914;5.58e-08;1!UBERON:0002316;5.58e-08;1!UBERON:0001020;5.58e-08;1!UBERON:0007375;5.58e-08;1!UBERON:0003323;5.58e-08;1!UBERON:0010258;5.58e-08;1!UBERON:0005253;5.58e-08;1!UBERON:0007842;5.58e-08;1!UBERON:0002397;5.58e-08;1!UBERON:0003113;5.58e-08;1!UBERON:0003277;5.58e-08;1!UBERON:0002437;5.58e-08;1!UBERON:0001709;5.58e-08;1!UBERON:0002244;5.58e-08;1!UBERON:0005620;5.58e-08;1!UBERON:0010364;5.58e-08;1!UBERON:0004288;5.58e-08;1!UBERON:0003296;9.29e-08;4!UBERON:0010133;9.29e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.10e-15,2;UBERON:0000007,1.68e-14,2;UBERON:0000998,1.77e-08,1;UBERON:0006868,1.77e-08,1;UBERON:0000996,2.52e-08,1;UBERON:0003064,2.93e-08,28;UBERON:0005256,5.54e-08,122;UBERON:0002336,6.19e-08,1;UBERON:0011215,6.19e-08,1;UBERON:0001018,6.19e-08,1;UBERON:0002473,6.19e-08,1;UBERON:0005340,6.19e-08,1;UBERON:0003544,6.19e-08,1;UBERON:0005970,6.19e-08,1;UBERON:0002316,6.19e-08,1;UBERON:0001020,6.19e-08,1;UBERON:0002437,6.19e-08,1;UBERON:0000162,6.33e-08,14;UBERON:0001353,6.33e-08,14;UBERON:0000163,6.33e-08,14;UBERON:0006866,6.33e-08,14;UBERON:0000164,6.33e-08,14;UBERON:0000931,6.33e-08,14;UBERON:0005705,9.94e-08,1;UBERON:0008193,9.94e-08,1;UBERON:0010912,9.94e-08,1;UBERON:0002514,9.94e-08,1;UBERON:0003457,9.94e-08,1;UBERON:0008907,9.94e-08,1;UBERON:0008001,9.94e-08,1;UBERON:0007213,9.94e-08,1;UBERON:0009891,9.94e-08,1;UBERON:0007914,9.94e-08,1;UBERON:0009292,9.94e-08,1;UBERON:0003099,9.94e-08,1;UBERON:0007375,9.94e-08,1;UBERON:0003323,9.94e-08,1;UBERON:0010258,9.94e-08,1;UBERON:0007842,9.94e-08,1;UBERON:0009494,9.94e-08,1;UBERON:0010042,9.94e-08,1;UBERON:0010045,9.94e-08,1;UBERON:0010259,9.94e-08,1;UBERON:0010359,9.94e-08,1;UBERON:0009526,9.94e-08,1;UBERON:0002397,9.94e-08,1;UBERON:0003113,9.94e-08,1;UBERON:0003277,9.94e-08,1;UBERON:0001709,9.94e-08,1;UBERON:0004066,9.94e-08,1;UBERON:0002244,9.94e-08,1;UBERON:0005620,9.94e-08,1;UBERON:0004362,9.94e-08,1;UBERON:0010364,9.94e-08,1;UBERON:0010046,9.94e-08,1;UBERON:0005868,9.94e-08,1;UBERON:0007238,9.94e-08,1;UBERON:0004288,9.94e-08,1;UBERON:0004068,9.94e-08,1;UBERON:0010334,9.94e-08,1;UBERON:0003852,9.94e-08,1;UBERON:0010253,9.94e-08,1;UBERON:0003296,1.10e-07,4;UBERON:0010133,1.10e-07,4;UBERON:0003104,1.76e-07,160;UBERON:0009142,1.76e-07,160;UBERON:0004122,2.11e-07,15|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,2.00146596706261,0,3.48935409640147,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0,0.515281080091258,0,3.54430297706659,1.26668106709558,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:30192985..30192997,- | |||
|id=chr20:30192985..30192997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000515;8.18e-10;3!CL:0002616;1.90e-08;1!CL:0002581;5.58e-08;1!CL:0000056;1.43e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,2.04e-08,1;CL:0002581,4.71e-08,1;CL:0000515,2.60e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.90e-08;1!UBERON:0009143;5.58e-08;1!UBERON:0003099;5.58e-08;1!UBERON:0003852;5.58e-08;1!CL:0000515;1.43e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-13!115;UBERON:0000475!2.94e-09!365;UBERON:0001049!1.63e-07!57;UBERON:0005068!1.63e-07!57;UBERON:0006241!1.63e-07!57;UBERON:0007135!1.63e-07!57;UBERON:0000481!1.64e-07!347;UBERON:0002616!6.36e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.00e-14;2!UBERON:0000007;1.19e-14;2!UBERON:0000998;1.90e-08;1!UBERON:0006868;1.90e-08;1!UBERON:0002336;5.58e-08;1!UBERON:0000996;5.58e-08;1!UBERON:0005705;5.58e-08;1!UBERON:0011215;5.58e-08;1!UBERON:0001018;5.58e-08;1!UBERON:0008193;5.58e-08;1!UBERON:0010912;5.58e-08;1!UBERON:0002514;5.58e-08;1!UBERON:0003457;5.58e-08;1!UBERON:0002473;5.58e-08;1!UBERON:0005340;5.58e-08;1!UBERON:0008907;5.58e-08;1!UBERON:0008001;5.58e-08;1!UBERON:0003544;5.58e-08;1!UBERON:0005970;5.58e-08;1!UBERON:0007213;5.58e-08;1!UBERON:0009891;5.58e-08;1!UBERON:0007914;5.58e-08;1!UBERON:0002316;5.58e-08;1!UBERON:0001020;5.58e-08;1!UBERON:0007375;5.58e-08;1!UBERON:0003323;5.58e-08;1!UBERON:0010258;5.58e-08;1!UBERON:0005253;5.58e-08;1!UBERON:0007842;5.58e-08;1!UBERON:0002397;5.58e-08;1!UBERON:0003113;5.58e-08;1!UBERON:0003277;5.58e-08;1!UBERON:0002437;5.58e-08;1!UBERON:0001709;5.58e-08;1!UBERON:0002244;5.58e-08;1!UBERON:0005620;5.58e-08;1!UBERON:0010364;5.58e-08;1!UBERON:0004288;5.58e-08;1!UBERON:0003296;9.29e-08;4!UBERON:0010133;9.29e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.10e-15,2;UBERON:0000007,1.68e-14,2;UBERON:0000998,1.77e-08,1;UBERON:0006868,1.77e-08,1;UBERON:0000996,2.52e-08,1;UBERON:0003064,2.93e-08,28;UBERON:0005256,5.54e-08,122;UBERON:0002336,6.19e-08,1;UBERON:0011215,6.19e-08,1;UBERON:0001018,6.19e-08,1;UBERON:0002473,6.19e-08,1;UBERON:0005340,6.19e-08,1;UBERON:0003544,6.19e-08,1;UBERON:0005970,6.19e-08,1;UBERON:0002316,6.19e-08,1;UBERON:0001020,6.19e-08,1;UBERON:0002437,6.19e-08,1;UBERON:0000162,6.33e-08,14;UBERON:0001353,6.33e-08,14;UBERON:0000163,6.33e-08,14;UBERON:0006866,6.33e-08,14;UBERON:0000164,6.33e-08,14;UBERON:0000931,6.33e-08,14;UBERON:0005705,9.94e-08,1;UBERON:0008193,9.94e-08,1;UBERON:0010912,9.94e-08,1;UBERON:0002514,9.94e-08,1;UBERON:0003457,9.94e-08,1;UBERON:0008907,9.94e-08,1;UBERON:0008001,9.94e-08,1;UBERON:0007213,9.94e-08,1;UBERON:0009891,9.94e-08,1;UBERON:0007914,9.94e-08,1;UBERON:0009292,9.94e-08,1;UBERON:0003099,9.94e-08,1;UBERON:0007375,9.94e-08,1;UBERON:0003323,9.94e-08,1;UBERON:0010258,9.94e-08,1;UBERON:0007842,9.94e-08,1;UBERON:0009494,9.94e-08,1;UBERON:0010042,9.94e-08,1;UBERON:0010045,9.94e-08,1;UBERON:0010259,9.94e-08,1;UBERON:0010359,9.94e-08,1;UBERON:0009526,9.94e-08,1;UBERON:0002397,9.94e-08,1;UBERON:0003113,9.94e-08,1;UBERON:0003277,9.94e-08,1;UBERON:0001709,9.94e-08,1;UBERON:0004066,9.94e-08,1;UBERON:0002244,9.94e-08,1;UBERON:0005620,9.94e-08,1;UBERON:0004362,9.94e-08,1;UBERON:0010364,9.94e-08,1;UBERON:0010046,9.94e-08,1;UBERON:0005868,9.94e-08,1;UBERON:0007238,9.94e-08,1;UBERON:0004288,9.94e-08,1;UBERON:0004068,9.94e-08,1;UBERON:0010334,9.94e-08,1;UBERON:0003852,9.94e-08,1;UBERON:0010253,9.94e-08,1;UBERON:0003296,1.10e-07,4;UBERON:0010133,1.10e-07,4;UBERON:0003104,1.76e-07,160;UBERON:0009142,1.76e-07,160;UBERON:0004122,2.11e-07,15 | |||
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| |||
|short_description=p@chr20:30192985..30192997,- | |||
}} |
Revision as of 07:57, 12 September 2013
Short description: | p@chr20:30192985..30192997, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:30192985..30192997, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 2.04e-08 | 1 |
perirenal preadipocyte | 4.71e-08 | 1 |
skeletal muscle myoblast | 2.60e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.