FFCP PHASE1:Hg19::chr21:46493752..46493757,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=104|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=226|TSSclassifier=S|UniProt=|association_with_transcript=-10bp_to_ENST00000462214_5end|description=CAGE_peak_2_at_ADARB1_5end|id=chr21:46493752..46493757,+|ontology_enrichment_celltype=CL:0000066!2.45e-27!254;CL:0002321!4.12e-12!248;CL:0000220!1.58e-11!246;CL:0000223!4.62e-10!59;CL:0002076!3.82e-08!43;CL:0002368!3.19e-07!13|ontology_enrichment_celltype_v019=CL:0002368;3.43e-08;13!CL:0002076;4.20e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,2.92e-26,253;CL:0002321,6.52e-10,250;CL:0000223,7.03e-10,58;CL:0002076,5.03e-09,42;CL:0002368,1.85e-08,13;CL:0002202,6.95e-07,9;CL:0002632,6.95e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!7.97e-15!143;DOID:305!1.02e-13!106;DOID:162!8.50e-11!235;DOID:14566!4.38e-10!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,2.43e-14,143;DOID:305,5.20e-13,106;DOID:162,1.50e-09,235;DOID:14566,3.39e-09,239|ontology_enrichment_uberon=UBERON:0001048!8.80e-13!168;UBERON:0000481!9.82e-12!347;UBERON:0004119!1.92e-11!169;UBERON:0000925!1.92e-11!169;UBERON:0006595!1.92e-11!169;UBERON:0003104!3.86e-10!238;UBERON:0009142!3.86e-10!238;UBERON:0005177!1.00e-09!107;UBERON:0000119!3.72e-09!312;UBERON:0000483!1.24e-08!309;UBERON:0000466!1.62e-08!126;UBERON:0000077!2.86e-08!130;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0004921!7.38e-08!129;UBERON:0004185!7.38e-08!129;UBERON:0000464!5.61e-07!104;UBERON:0001041!6.50e-07!98;UBERON:0000064!7.90e-07!219|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.20e-08,101;UBERON:0001048,1.81e-08,160;UBERON:0004119,2.37e-07,160;UBERON:0000925,2.37e-07,160;UBERON:0006595,2.37e-07,160;UBERON:0006554,2.61e-07,47;UBERON:0001008,6.21e-07,48|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,1.26343974685366,0.261185628199839,2.94880723801811,25.1208420470074,21.4072544687569,19.5187563889056,1.36142988256051,1.65698687863958,0,0,1.46062018077475,0.487932798790507,1.84681587115182,2.04000691244253,0.313454721478088,1.14494394852423,3.55873505189499,3.26410862946487,0.764134057479513,0.903106483949403,0.393553906568396,0,0.767658796194425,0.77408061658038,9.19421224478927,9.93979531968225,22.554994620174,0.154934401160603,0.142169232487422,0,1.66198622559563,1.60435557976113,1.95309783644267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,1.12101712596307,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,2.01210257911091,1.15076305659177,0,0,0.579386075843295,0.795285947051099,0,2.83604451492204,9.97782288581538,7.64162635530197,2.22664428346111,14.9361068199942,12.2358866118862,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0.56530794192401,0,1.92582629358047,2.29894463190492,0.516833518338658,1.06729878806013,0,0.402829317109147,0.760272105718513,0.732186172644509,0.735326160691737,0,1.07159673940896,3.59246996201872,1.35133776579987,1.53316637465883,0,0.732806975721629,0,0,18.3159501899864,0,0.379891534993739,0.529636723252875,2.86836620748814,2.12801029319014,1.12135520028461,1.06748995729705,0.24666754841716,0.622422070799533,2.96363478553314,1.63461903113459,1.66493170409425,1.15235184896,1.40592859100278,0.312160076830321,0.570471821544449,0.597794722207204,2.81842796745036,2.75184005425824,3.65172097425846,0.408308342509787,0.491337269247072,0.516628905878827,0,0.247266929278557,0,0,1.34668891163253,1.12606667884768,0.277064115484183,0,0.612975591598039,0.300476117813194,1.13432183160021,0.89694817844431,0,0.211931901159562,1.80054657650641,0.103052529238439,1.8034837803194,0,0.506328996723799,0.194874010322397,1.51460264546469,0,0,0.355009592516614,0.201504196455281,0.67824236924195,0.386521706326594,1.63647672354501,1.14721838155602,6.70855383712775,5.96383957446684,6.50686080069303,10.7807497215985,5.80337957013945,5.10968302706162,0,0,0,0.464367928031979,0.721879481669586,2.12952240071719,1.68584690078102,2.16909926895134,2.42646740011267,1.08939722046203,2.84724742933316,2.29213223872279,0.98110732562673,2.30848294167834,1.4763109092493,5.60967095213783,5.3504621473082,2.94017422771084,1.26755034821831,0.982827216677626,0.590789906681404,0,10.5770057147078,3.08822058537346,3.18275827685014,7.86812272803337,1.80952150340936,28.4246526636686,0.977424915930974,3.11980435583874,1.44331342025273,1.62302566965108,2.7003999674239,0.866198686566443,3.24089858803628,0.570762456703795,4.74122638775565,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0.839910640994298,2.83550194484773,0.358234090811393,3.48760726216754,3.4504441124869,0.985326475791887,0.0880484340132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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=226 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000462214_5end | |||
|description=CAGE_peak_2_at_ADARB1_5end | |||
|id=chr21:46493752..46493757,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.45e-27!254;CL:0002321!4.12e-12!248;CL:0000220!1.58e-11!246;CL:0000223!4.62e-10!59;CL:0002076!3.82e-08!43;CL:0002368!3.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.43e-08;13!CL:0002076;4.20e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.92e-26,253;CL:0002321,6.52e-10,250;CL:0000223,7.03e-10,58;CL:0002076,5.03e-09,42;CL:0002368,1.85e-08,13;CL:0002202,6.95e-07,9;CL:0002632,6.95e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.97e-15!143;DOID:305!1.02e-13!106;DOID:162!8.50e-11!235;DOID:14566!4.38e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.43e-14,143;DOID:305,5.20e-13,106;DOID:162,1.50e-09,235;DOID:14566,3.39e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001048!8.80e-13!168;UBERON:0000481!9.82e-12!347;UBERON:0004119!1.92e-11!169;UBERON:0000925!1.92e-11!169;UBERON:0006595!1.92e-11!169;UBERON:0003104!3.86e-10!238;UBERON:0009142!3.86e-10!238;UBERON:0005177!1.00e-09!107;UBERON:0000119!3.72e-09!312;UBERON:0000483!1.24e-08!309;UBERON:0000466!1.62e-08!126;UBERON:0000077!2.86e-08!130;UBERON:0001007!3.59e-08!155;UBERON:0001555!3.59e-08!155;UBERON:0007026!3.59e-08!155;UBERON:0004921!7.38e-08!129;UBERON:0004185!7.38e-08!129;UBERON:0000464!5.61e-07!104;UBERON:0001041!6.50e-07!98;UBERON:0000064!7.90e-07!219 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.20e-08,101;UBERON:0001048,1.81e-08,160;UBERON:0004119,2.37e-07,160;UBERON:0000925,2.37e-07,160;UBERON:0006595,2.37e-07,160;UBERON:0006554,2.61e-07,47;UBERON:0001008,6.21e-07,48 | |||
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| |||
|short_description=p2@ADARB1 | |||
}} |
Revision as of 10:44, 12 September 2013
Short description: | p2@ADARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ADARB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENST00000462214_5end |
EntrezGene: | ADARB1 |
HGNC: | 226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.92e-26 | 253 |
embryonic cell | 6.52e-10 | 250 |
endodermal cell | 7.03e-10 | 58 |
endo-epithelial cell | 5.03e-09 | 42 |
respiratory epithelial cell | 1.85e-08 | 13 |
epithelial cell of tracheobronchial tree | 6.95e-07 | 9 |
epithelial cell of lower respiratory tract | 6.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.20e-08 | 101 |
primordium | 1.81e-08 | 160 |
endoderm-derived structure | 2.37e-07 | 160 |
endoderm | 2.37e-07 | 160 |
presumptive endoderm | 2.37e-07 | 160 |
urinary system structure | 2.61e-07 | 47 |
renal system | 6.21e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.43e-14 | 143 |
carcinoma | 5.20e-13 | 106 |
cancer | 1.50e-09 | 235 |
disease of cellular proliferation | 3.39e-09 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.