FFCP PHASE1:Hg19::chr2:154449516..154449549,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=251bp_to_ENST00000424322_5end|description=CAGE_peak_1_at_ENST00000424322_5end|id=chr2:154449516..154449549,-|ontology_enrichment_celltype=CL:0000066!8.43e-11!254;CL:0002178!1.93e-09!3;CL:0002322!1.89e-08!5;CL:0000054!7.65e-07!2;CL:0000137!7.65e-07!2;CL:0000092!7.65e-07!2|ontology_enrichment_celltype_v019=CL:0002178;3.05e-10;3!CL:0000039;3.44e-09;7!CL:0000586;3.44e-09;7!CL:0000319;1.95e-08;1!CL:0000167;5.62e-08;1!CL:0000164;5.62e-08;1!CL:0000502;5.62e-08;1!CL:0000172;5.62e-08;1!CL:1001319;5.62e-08;1!CL:1000600;5.62e-08;1!CL:0000173;5.62e-08;1|ontology_enrichment_celltype_v019_2=CL:0002178,2.71e-10,3;CL:0000039,2.98e-09,7;CL:0000586,2.98e-09,7;CL:0000319,2.02e-08,1;CL:0000066,3.88e-08,253;CL:0000167,5.07e-08,1;CL:0000164,5.07e-08,1;CL:0000502,5.07e-08,1;CL:0000172,5.07e-08,1;CL:0000173,5.07e-08,1;CL:0002351,5.07e-08,1;CL:1001319,6.68e-08,1;CL:1000600,6.68e-08,1|ontology_enrichment_development_v019=CL:0002351;5.62e-08;1|ontology_enrichment_disease=DOID:0050687!2.56e-21!143;DOID:305!1.61e-20!106;DOID:162!1.45e-18!235;DOID:14566!6.54e-18!239;DOID:7!2.52e-12!39;DOID:299!8.96e-08!25;DOID:200!7.65e-07!2;DOID:4305!7.65e-07!2|ontology_enrichment_disease_v019=DOID:3095;9.55e-11;22!DOID:2994;9.55e-11;22!DOID:299;1.08e-09;25!DOID:5662;1.22e-08;1!DOID:3030;1.95e-08;1!DOID:0060085;2.79e-08;1!DOID:3165;2.79e-08;1!DOID:0060121;2.79e-08;1!DOID:3111;2.79e-08;1!DOID:2438;2.79e-08;1!DOID:4418;2.79e-08;1!DOID:3603;2.79e-08;1!DOID:0050619;5.62e-08;1!DOID:1357;5.62e-08;1!DOID:4430;5.62e-08;1!DOID:0050615;3.12e-07;16!DOID:305;3.91e-07;106|ontology_enrichment_disease_v019_2=DOID:0050687,1.05e-23,143;DOID:305,1.48e-22,106;DOID:162,1.87e-18,235;DOID:14566,5.65e-18,239;DOID:3095,8.51e-11,22;DOID:2994,8.51e-11,22;DOID:299,1.04e-09,25;DOID:5662,1.22e-08,1;DOID:3030,2.02e-08,1;DOID:3111,2.69e-08,1;DOID:3603,2.69e-08,1;DOID:0060085,2.89e-08,1;DOID:3165,2.89e-08,1;DOID:0060121,2.89e-08,1;DOID:2438,2.89e-08,1;DOID:4418,2.89e-08,1;DOID:4430,5.07e-08,1;DOID:0050619,5.43e-08,1;DOID:1357,5.43e-08,1;DOID:0050615,3.09e-07,16|ontology_enrichment_uberon=UBERON:0002294!1.37e-09!7;UBERON:0001173!1.37e-09!7;UBERON:0004912!1.37e-09!7;UBERON:0001007!5.42e-08!155;UBERON:0001555!5.42e-08!155;UBERON:0007026!5.42e-08!155;UBERON:0000077!1.40e-07!130;UBERON:0005911!1.94e-07!82;UBERON:0004119!2.06e-07!169;UBERON:0000925!2.06e-07!169;UBERON:0006595!2.06e-07!169;UBERON:0009497!2.59e-07!25;UBERON:0000015!2.59e-07!25;UBERON:0002423!2.59e-07!25;UBERON:0006235!2.59e-07!25;UBERON:0004161!2.59e-07!25;UBERON:0000466!3.18e-07!126;UBERON:0001041!5.28e-07!98;UBERON:0004921!9.71e-07!129;UBERON:0004185!9.71e-07!129|ontology_enrichment_uberon_v019=UBERON:0004645;5.62e-08;1!UBERON:0001764;5.62e-08;1!UBERON:0001825;5.62e-08;1!UBERON:0001256;5.62e-08;1!UBERON:0001259;5.62e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.43e-08,1;UBERON:0001825,5.43e-08,1;UBERON:0004645,6.68e-08,1;UBERON:0001256,6.68e-08,1;UBERON:0001259,6.68e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.464775771478074,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,22.2697243085782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0.524759999977174,0,0,25.9338723298622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,2.2439411102443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,3.17943378724783,0,0,8.41667612641104,0.640358984218058,2.99714414373195,5.18725501754782,0,2.74551996579143,0,0,0,0,0,4.38592335836184,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65983798109815,0,0.0824158583811665,0,0.590564889088493,0,0,0,1.12527203925513,0,0,0,0,0,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=251bp_to_ENST00000424322_5end | |||
|description=CAGE_peak_1_at_ENST00000424322_5end | |||
|id=chr2:154449516..154449549,- | |||
|ontology_enrichment_celltype=CL:0000066!8.43e-11!254;CL:0002178!1.93e-09!3;CL:0002322!1.89e-08!5;CL:0000054!7.65e-07!2;CL:0000137!7.65e-07!2;CL:0000092!7.65e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002178;3.05e-10;3!CL:0000039;3.44e-09;7!CL:0000586;3.44e-09;7!CL:0000319;1.95e-08;1!CL:0000167;5.62e-08;1!CL:0000164;5.62e-08;1!CL:0000502;5.62e-08;1!CL:0000172;5.62e-08;1!CL:1001319;5.62e-08;1!CL:1000600;5.62e-08;1!CL:0000173;5.62e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.71e-10,3;CL:0000039,2.98e-09,7;CL:0000586,2.98e-09,7;CL:0000319,2.02e-08,1;CL:0000066,3.88e-08,253;CL:0000167,5.07e-08,1;CL:0000164,5.07e-08,1;CL:0000502,5.07e-08,1;CL:0000172,5.07e-08,1;CL:0000173,5.07e-08,1;CL:0002351,5.07e-08,1;CL:1001319,6.68e-08,1;CL:1000600,6.68e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;5.62e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.56e-21!143;DOID:305!1.61e-20!106;DOID:162!1.45e-18!235;DOID:14566!6.54e-18!239;DOID:7!2.52e-12!39;DOID:299!8.96e-08!25;DOID:200!7.65e-07!2;DOID:4305!7.65e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.55e-11;22!DOID:2994;9.55e-11;22!DOID:299;1.08e-09;25!DOID:5662;1.22e-08;1!DOID:3030;1.95e-08;1!DOID:0060085;2.79e-08;1!DOID:3165;2.79e-08;1!DOID:0060121;2.79e-08;1!DOID:3111;2.79e-08;1!DOID:2438;2.79e-08;1!DOID:4418;2.79e-08;1!DOID:3603;2.79e-08;1!DOID:0050619;5.62e-08;1!DOID:1357;5.62e-08;1!DOID:4430;5.62e-08;1!DOID:0050615;3.12e-07;16!DOID:305;3.91e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.05e-23,143;DOID:305,1.48e-22,106;DOID:162,1.87e-18,235;DOID:14566,5.65e-18,239;DOID:3095,8.51e-11,22;DOID:2994,8.51e-11,22;DOID:299,1.04e-09,25;DOID:5662,1.22e-08,1;DOID:3030,2.02e-08,1;DOID:3111,2.69e-08,1;DOID:3603,2.69e-08,1;DOID:0060085,2.89e-08,1;DOID:3165,2.89e-08,1;DOID:0060121,2.89e-08,1;DOID:2438,2.89e-08,1;DOID:4418,2.89e-08,1;DOID:4430,5.07e-08,1;DOID:0050619,5.43e-08,1;DOID:1357,5.43e-08,1;DOID:0050615,3.09e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.37e-09!7;UBERON:0001173!1.37e-09!7;UBERON:0004912!1.37e-09!7;UBERON:0001007!5.42e-08!155;UBERON:0001555!5.42e-08!155;UBERON:0007026!5.42e-08!155;UBERON:0000077!1.40e-07!130;UBERON:0005911!1.94e-07!82;UBERON:0004119!2.06e-07!169;UBERON:0000925!2.06e-07!169;UBERON:0006595!2.06e-07!169;UBERON:0009497!2.59e-07!25;UBERON:0000015!2.59e-07!25;UBERON:0002423!2.59e-07!25;UBERON:0006235!2.59e-07!25;UBERON:0004161!2.59e-07!25;UBERON:0000466!3.18e-07!126;UBERON:0001041!5.28e-07!98;UBERON:0004921!9.71e-07!129;UBERON:0004185!9.71e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.62e-08;1!UBERON:0001764;5.62e-08;1!UBERON:0001825;5.62e-08;1!UBERON:0001256;5.62e-08;1!UBERON:0001259;5.62e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.43e-08,1;UBERON:0001825,5.43e-08,1;UBERON:0004645,6.68e-08,1;UBERON:0001256,6.68e-08,1;UBERON:0001259,6.68e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.464775771478074,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,22.2697243085782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0.524759999977174,0,0,25.9338723298622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,2.2439411102443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,3.17943378724783,0,0,8.41667612641104,0.640358984218058,2.99714414373195,5.18725501754782,0,2.74551996579143,0,0,0,0,0,4.38592335836184,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65983798109815,0,0.0824158583811665,0,0.590564889088493,0,0,0,1.12527203925513,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,6.11885294208679,0,0,0,0,0,10.5722253347501,0,0,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906823702049089,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,5.16123108382811,3.38099397373803,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37036506077798,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,19.2066570569909,0,0,0,2.11339663594931,0,0,0,0,0.647782773655864,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,1.64973582971138,0,0,0,0,0,0,0.0999411559249289,0,0,4.57375790128259,0,0,0,0,0,0,0,0,0,0,0,6.22813760193065,20.2717601618299,1.83579893535567,0.26721740526556,1.65410819162721,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0,1.22104902916462,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000424322 | |||
}} |
Revision as of 14:08, 12 September 2013
Short description: | p1@ENST00000424322 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000424322_5end |
Coexpression cluster: | NA |
Association with transcript: | 251bp_to_ENST00000424322_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.71e-10 | 3 |
germ line cell | 2.98e-09 | 7 |
germ cell | 2.98e-09 | 7 |
mucus secreting cell | 2.02e-08 | 1 |
epithelial cell | 3.88e-08 | 253 |
peptide hormone secreting cell | 5.07e-08 | 1 |
enteroendocrine cell | 5.07e-08 | 1 |
type D enteroendocrine cell | 5.07e-08 | 1 |
somatostatin secreting cell | 5.07e-08 | 1 |
pancreatic D cell | 5.07e-08 | 1 |
progenitor cell of endocrine pancreas | 5.07e-08 | 1 |
bladder cell | 6.68e-08 | 1 |
lower urinary tract cell | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.43e-08 | 1 |
paranasal sinus | 5.43e-08 | 1 |
urinary bladder urothelium | 6.68e-08 | 1 |
wall of urinary bladder | 6.68e-08 | 1 |
mucosa of urinary bladder | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.05e-23 | 143 |
carcinoma | 1.48e-22 | 106 |
cancer | 1.87e-18 | 235 |
disease of cellular proliferation | 5.65e-18 | 239 |
germ cell and embryonal cancer | 8.51e-11 | 22 |
germ cell cancer | 8.51e-11 | 22 |
adenocarcinoma | 1.04e-09 | 25 |
pleomorphic carcinoma | 1.22e-08 | 1 |
mucinous adenocarcinoma | 2.02e-08 | 1 |
cystadenocarcinoma | 2.69e-08 | 1 |
mucinous cystadenocarcinoma | 2.69e-08 | 1 |
organ system benign neoplasm | 2.89e-08 | 1 |
skin benign neoplasm | 2.89e-08 | 1 |
integumentary system benign neoplasm | 2.89e-08 | 1 |
dermis tumor | 2.89e-08 | 1 |
cutaneous fibrous histiocytoma | 2.89e-08 | 1 |
somatostatinoma | 5.07e-08 | 1 |
paranasal sinus cancer | 5.43e-08 | 1 |
maxillary sinus cancer | 5.43e-08 | 1 |
respiratory system cancer | 3.09e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.