FFCP PHASE1:Mm9::chr10:22022300..22022354,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=177|UniProt=|association_with_transcript=286bp_to_uc007eph.1,uc007epi.1_5end|description=CAGE_peak_1_at_uc007eph.1_5end,CAGE_peak_1_at_uc007epi.1_5end|id=chr10:22022300..22022354,-|ontology_enrichment_celltype=CL:0000988!1.05e-09!32;CL:0002032!1.05e-09!32;CL:0000037!1.05e-09!32;CL:0000566!1.05e-09!32;CL:0000837!1.05e-09!32;CL:0002031!1.32e-08!25;CL:0000738!3.16e-08!17;CL:0002087!3.16e-08!17;CL:0000838!1.78e-07!12;CL:0000084!7.32e-07!11;CL:0000827!7.32e-07!11;CL:0000542!8.80e-07!13;CL:0000051!8.80e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,6.92e-11,32;CL:0002032,6.92e-11,32;CL:0000037,6.92e-11,32;CL:0000837,6.92e-11,32;CL:0002031,4.97e-10,25;CL:0000738,1.82e-08,17;CL:0002087,1.82e-08,17;CL:0000838,5.32e-08,12;CL:0000084,2.47e-07,11;CL:0000827,2.47e-07,11;CL:0002320,5.83e-07,46;CL:0000134,5.83e-07,46;CL:0000542,6.83e-07,13;CL:0000051,6.83e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.11e-18!48;UBERON:0002405!8.69e-18!70;UBERON:0002390!2.02e-16!45;UBERON:0003061!2.02e-16!45;UBERON:0000926!2.74e-10!193;UBERON:0004120!2.74e-10!193;UBERON:0006603!2.74e-10!193;UBERON:0005057!1.45e-09!51;UBERON:0003081!1.91e-09!88;UBERON:0004177!2.21e-09!29;UBERON:0001041!4.01e-09!92;UBERON:0000077!4.83e-09!97;UBERON:0002371!4.57e-08!16;UBERON:0001474!6.44e-08!22;UBERON:0004765!6.44e-08!22;UBERON:0001434!6.44e-08!22;UBERON:0003104!1.22e-07!131;UBERON:0009142!1.22e-07!131;UBERON:0001007!4.24e-07!128;UBERON:0001555!4.24e-07!128;UBERON:0007026!4.24e-07!128;UBERON:0004119!7.41e-07!130;UBERON:0000925!7.41e-07!130;UBERON:0006595!7.41e-07!130;UBERON:0003408!8.92e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.29e-20,48;UBERON:0002405,3.29e-20,48;UBERON:0002390,1.31e-18,45;UBERON:0003061,1.31e-18,45;UBERON:0004177,7.39e-11,29;UBERON:0005057,7.39e-11,29;UBERON:0001041,1.68e-10,80;UBERON:0003081,7.59e-10,87;UBERON:0000077,2.45e-09,35;UBERON:0001474,1.18e-08,22;UBERON:0004765,1.18e-08,22;UBERON:0001434,1.18e-08,22;UBERON:0002371,1.21e-08,16;UBERON:0003408,5.99e-08,24;UBERON:0001007,1.15e-07,116;UBERON:0001555,1.15e-07,116;UBERON:0007026,1.15e-07,116;UBERON:0006562,1.27e-07,24;UBERON:0001557,1.27e-07,24;UBERON:0001042,1.27e-07,24;UBERON:0008814,1.27e-07,24;UBERON:0009145,1.27e-07,24;UBERON:0002370,1.54e-07,23;UBERON:0000974,1.54e-07,23;UBERON:0004807,1.54e-07,23;UBERON:0005058,1.54e-07,23;UBERON:0003351,1.54e-07,23;UBERON:0009113,1.54e-07,23;UBERON:0003295,1.54e-07,23;UBERON:0009722,1.54e-07,23;UBERON:0005562,1.54e-07,23;UBERON:0007690,1.54e-07,23;UBERON:0002204,2.17e-07,32;UBERON:0004119,2.23e-07,118;UBERON:0000925,2.23e-07,118;UBERON:0006595,2.23e-07,118;UBERON:0004921,4.07e-07,114;UBERON:0002384,5.83e-07,46;UBERON:0001004,7.10e-07,42|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,175.349473233661,36.4642790372817,77.2412936862578,5.30775701499065,5.74359544766422,109.054864966178,206.399570111253,29.3136590397783,43.3297072214228,6.99561878128147,183.756711321173,219.108864901971,138.775416137956,3.82694805679814,25.5177744586275,19.8511839745591,9.43955294481099,7.79991555628378,0,0,0.215471232685889,0.760093677825496,3.78045194639896,1.99557459589774,0,0,0,0,0.166234645358492,0,238.981561150774,138.296355980713,225.115209908733,342.35072603405,323.080514385345,273.827839109571,0,0,0,0,0,0,0,0.139986421625363,0,98.8239549680067,81.2405599052706,92.4257947641776,0,1.71920063963254,1.03134418455488,0,0,0,0,0,26.5470416598013,32.6325899647102,31.9716051725745,7.78960287347852,3.84218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,1.22238598221448,1.76777151284201,1.13897344639282,0,0,0.0755715601067855,1.15945795480671,4.30211938490693,0,0,0.649776417447669,0,6.60088774619234,0.340860645156116,0,0,0,0,0,0,0,0,0,9.81981365583916,356.816403665803,6.08612770165782,0.520455980298408,0.608930956624282,0.922461989024234,1.20578112442098,1.76383060703557,0.502666365318702,0.494389935468748,15.6167305473505,34.4998115260451,7.27950824763341,27.6051898075492,31.0320162006542,3.72783522436244,0.292780797011547,0.628340120440365,5.36459815938042,8.62668896442626,5.39912457894067,7.24300294316469,0.898743836428936,0.457500602818626,0.251308704225729,1.21677024134594,0.767146371990992,0.62336413367868,0.162241263067758,0.916554274652847,38.1929399772986,2.27450482590307,1.89397670297827,0.780722657776222,0.229902104433473,0.540186389416048,0.753524089178575,0.340182495756639,0.640568601424249,0.749613796477831,1.03481348295606,0.215567992932842,0.567318240503458,0.527853372491847,0,1.11218899690239,2.089512999133,2.67516777330327,0.199034266818493,5.61770549850588,5.1469581422943,6.53576048609863,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0,0.817357396570186,1.31647879930784,3.61168420974009,2.91847714365081,4.5321996101853,7.90380415047782,4.69722465661301,0.420579897128254,0.308713837137853,2.64335026387038,1.05780226665418,0.639864751605702,0.232236671860439,1.03093969057675,1.81515172161008,1.11189021922435,0.570676878337677,5.21981967698963,0.494096864172033,3.51869292320377,2.38747766449381,4.874102177978,0.898819408654221,3.45820879799511,4.58024928485045,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.420814919341911,1.07502113111237,2.06654207171443,2.04098346193787,1.1105744752962,4.15033677922008,1.66845105716094,1.57247196090562,2.69834534861824,4.86864291332407,7.23531479257251,8.14802725700543,9.49397253587675,9.89024883327716,7.13859674289012,28.7536413054709,10.4199465347181,6.86482880852033,4.04126204715379,1.97337154874103,2.41221760681684,27.8977317151573,0.189491411770485,0.651859905768103,0.509235257325564,0.469380496577004,2.34508760418542,2.61848004974615,4.68320754858717,9.30047350226527,5.09368786192182,8.6105575075043,21.4660942277617,31.0832967358612,15.7667473853848,36.1899081454253,41.3368319702219,4.91764273019036,9.93372286697037,1.76605648986571,1.40654023910644,0,4.03953483526997,0,0,0,0,0,0,0,0,0,0,3.83238230062325,1.06839362200353,0.651547837414304,7.75359577970917,9.2921596837974,0,0.302323556964751,0.565815239267694,0.885905678642318,1.53717573971964,1.80899805217755,6.5436071305951,2.49548164869305,7.9009189483954,3.16255825724996,4.12542172992747,0.340439605753788,0.18006109403131,0.258717367565509,0,0.709360934569094,0.356737635204141,0.658196082408484,0.608929898229199,1.64270195644597,0.21183207086382,0.882113592219848,7.74965388824956,1.45317984026315,2.23157822234177,1.19372344003136,1.80554989719567,6.70405924248657,2.03967832211561,53.31171480893,12.5895989457566,37.9648781107909,33.1528484328256,64.6563697120449,62.4564412853807,4.58941760983409,2.37917468950219,3.73139929271944,5.72802370809068,0.158167996790568,0.609958401380546,1.08005340821801,1.04544148007234,1.9652630737156,1.21377911746339,2.31429676030941,4.18809507174447,2.98114438571124,11.8054469486516,0.56369293868419,0.299033092087958,0.165458490457098,0.388902376688095,0.516639293910924,0.844780627453891,1.17357238645754,0.781226309063701,0.524296722128554,0.483168241652012,1.15212002503146,18.0126338758062,1.82452693761148,6.05994647272481,8.44485349355668,10.5625750443814,21.2589049615953,25.8420216467933,32.0486273968833,33.1169955829924,23.47169644974,30.8528126518732,28.2627854145282,30.3067301167038,31.0892559802973,3.40095575422817,0,0,0,4.056981474676,3.75364950902364,4.02933573387983,5.78794623513478,1.50471631210609,0,0.920650473014354,0,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,1.2869045591501,1.77797382241292,2.67845574410562,1.92551525755089,1.01078884705519,2.28131369901216,2.82939512079114,2.62196220915671,1.53660365771686,2.06767688240208,3.33405583898152,1.97003354106254,2.70072908649187,2.88460130562315,1.91358596174717,1.71434626192708,1.95223386775271,2.86123427936785,2.61623549938191,2.72917203204459,1.69229215783353,2.92684756596436,1.8414879800649,1.62964936615034,3.36685362994643,2.01679530811096,1.28055827088233,1.22769312950907,2.01417893541756,2.12197272079256,0.999242311751784,2.33931608445408,3.43793686477277,3.06061331310149,4.85301122062934,11.5933917810211|short_description=p1@uc007eph.1,p1@uc007epi.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|UniProt= | |||
|association_with_transcript=286bp_to_uc007eph.1,uc007epi.1_5end | |||
|description=CAGE_peak_1_at_uc007eph.1_5end,CAGE_peak_1_at_uc007epi.1_5end | |||
|id=chr10:22022300..22022354,- | |||
|ontology_enrichment_celltype=CL:0000988!1.05e-09!32;CL:0002032!1.05e-09!32;CL:0000037!1.05e-09!32;CL:0000566!1.05e-09!32;CL:0000837!1.05e-09!32;CL:0002031!1.32e-08!25;CL:0000738!3.16e-08!17;CL:0002087!3.16e-08!17;CL:0000838!1.78e-07!12;CL:0000084!7.32e-07!11;CL:0000827!7.32e-07!11;CL:0000542!8.80e-07!13;CL:0000051!8.80e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.92e-11,32;CL:0002032,6.92e-11,32;CL:0000037,6.92e-11,32;CL:0000837,6.92e-11,32;CL:0002031,4.97e-10,25;CL:0000738,1.82e-08,17;CL:0002087,1.82e-08,17;CL:0000838,5.32e-08,12;CL:0000084,2.47e-07,11;CL:0000827,2.47e-07,11;CL:0002320,5.83e-07,46;CL:0000134,5.83e-07,46;CL:0000542,6.83e-07,13;CL:0000051,6.83e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.11e-18!48;UBERON:0002405!8.69e-18!70;UBERON:0002390!2.02e-16!45;UBERON:0003061!2.02e-16!45;UBERON:0000926!2.74e-10!193;UBERON:0004120!2.74e-10!193;UBERON:0006603!2.74e-10!193;UBERON:0005057!1.45e-09!51;UBERON:0003081!1.91e-09!88;UBERON:0004177!2.21e-09!29;UBERON:0001041!4.01e-09!92;UBERON:0000077!4.83e-09!97;UBERON:0002371!4.57e-08!16;UBERON:0001474!6.44e-08!22;UBERON:0004765!6.44e-08!22;UBERON:0001434!6.44e-08!22;UBERON:0003104!1.22e-07!131;UBERON:0009142!1.22e-07!131;UBERON:0001007!4.24e-07!128;UBERON:0001555!4.24e-07!128;UBERON:0007026!4.24e-07!128;UBERON:0004119!7.41e-07!130;UBERON:0000925!7.41e-07!130;UBERON:0006595!7.41e-07!130;UBERON:0003408!8.92e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.29e-20,48;UBERON:0002405,3.29e-20,48;UBERON:0002390,1.31e-18,45;UBERON:0003061,1.31e-18,45;UBERON:0004177,7.39e-11,29;UBERON:0005057,7.39e-11,29;UBERON:0001041,1.68e-10,80;UBERON:0003081,7.59e-10,87;UBERON:0000077,2.45e-09,35;UBERON:0001474,1.18e-08,22;UBERON:0004765,1.18e-08,22;UBERON:0001434,1.18e-08,22;UBERON:0002371,1.21e-08,16;UBERON:0003408,5.99e-08,24;UBERON:0001007,1.15e-07,116;UBERON:0001555,1.15e-07,116;UBERON:0007026,1.15e-07,116;UBERON:0006562,1.27e-07,24;UBERON:0001557,1.27e-07,24;UBERON:0001042,1.27e-07,24;UBERON:0008814,1.27e-07,24;UBERON:0009145,1.27e-07,24;UBERON:0002370,1.54e-07,23;UBERON:0000974,1.54e-07,23;UBERON:0004807,1.54e-07,23;UBERON:0005058,1.54e-07,23;UBERON:0003351,1.54e-07,23;UBERON:0009113,1.54e-07,23;UBERON:0003295,1.54e-07,23;UBERON:0009722,1.54e-07,23;UBERON:0005562,1.54e-07,23;UBERON:0007690,1.54e-07,23;UBERON:0002204,2.17e-07,32;UBERON:0004119,2.23e-07,118;UBERON:0000925,2.23e-07,118;UBERON:0006595,2.23e-07,118;UBERON:0004921,4.07e-07,114;UBERON:0002384,5.83e-07,46;UBERON:0001004,7.10e-07,42 | |||
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| |||
|short_description=p1@uc007eph.1,p1@uc007epi.1 | |||
}} |
Revision as of 16:26, 12 September 2013
Short description: | p1@uc007eph.1, p1@uc007epi.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007eph.1_5end, CAGE_peak_1_at_uc007epi.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | 286bp_to_uc007eph.1, uc007epi.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.92e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.92e-11 | 32 |
hematopoietic stem cell | 6.92e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.92e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 4.97e-10 | 25 |
leukocyte | 1.82e-08 | 17 |
nongranular leukocyte | 1.82e-08 | 17 |
lymphoid lineage restricted progenitor cell | 5.32e-08 | 12 |
T cell | 2.47e-07 | 11 |
pro-T cell | 2.47e-07 | 11 |
connective tissue cell | 5.83e-07 | 46 |
mesenchymal cell | 5.83e-07 | 46 |
lymphocyte | 6.83e-07 | 13 |
common lymphoid progenitor | 6.83e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.