FFCP PHASE1:Mm9::chr10:59814599..59814619,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=102|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:59814599..59814619,-|id=chr10:59814599..59814619,-|ontology_enrichment_celltype=CL:0000838!1.31e-12!12;CL:0000084!1.32e-11!11;CL:0000827!1.32e-11!11;CL:0000542!2.77e-11!13;CL:0000051!2.77e-11!13;CL:0000791!3.64e-10!9;CL:0000789!3.64e-10!9;CL:0002420!3.64e-10!9;CL:0002419!3.64e-10!9;CL:0000790!3.64e-10!9;CL:0002031!1.87e-09!25;CL:0000624!3.79e-09!8;CL:0000988!1.19e-07!32;CL:0002032!1.19e-07!32;CL:0000037!1.19e-07!32;CL:0000566!1.19e-07!32;CL:0000837!1.19e-07!32;CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0002320!4.13e-07!46;CL:0000134!4.13e-07!46;CL:0000893!4.78e-07!6;CL:0002489!4.78e-07!6;CL:0000898!4.78e-07!6;CL:0000809!4.78e-07!6;CL:0000810!4.78e-07!6;CL:0000895!4.78e-07!6;CL:0000808!4.78e-07!6;CL:0000894!4.78e-07!6;CL:0000806!4.78e-07!6;CL:0000807!4.78e-07!6;CL:0000805!4.78e-07!6;CL:0002425!4.78e-07!6;CL:0002436!4.78e-07!6;CL:0002427!4.78e-07!6;CL:0002428!4.78e-07!6;CL:0002429!4.78e-07!6;CL:0002433!4.78e-07!6;CL:0002431!4.78e-07!6;CL:0002432!4.78e-07!6;CL:0000219!5.02e-07!54|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-37,9;CL:0000789,1.56e-37,9;CL:0002420,1.56e-37,9;CL:0002419,1.56e-37,9;CL:0000790,1.56e-37,9;CL:0000838,2.41e-36,12;CL:0000542,1.64e-33,13;CL:0000051,1.64e-33,13;CL:0000624,2.39e-31,8;CL:0000084,1.18e-30,11;CL:0000827,1.18e-30,11;CL:0000738,1.67e-25,17;CL:0002087,1.67e-25,17;CL:0002031,1.40e-21,25;CL:0000893,4.63e-19,6;CL:0002489,4.63e-19,6;CL:0000898,4.63e-19,6;CL:0000809,4.63e-19,6;CL:0000810,4.63e-19,6;CL:0000895,4.63e-19,6;CL:0000808,4.63e-19,6;CL:0000894,4.63e-19,6;CL:0000806,4.63e-19,6;CL:0000807,4.63e-19,6;CL:0000805,4.63e-19,6;CL:0002425,4.63e-19,6;CL:0002436,4.63e-19,6;CL:0002427,4.63e-19,6;CL:0002428,4.63e-19,6;CL:0002429,4.63e-19,6;CL:0002433,4.63e-19,6;CL:0002431,4.63e-19,6;CL:0002432,4.63e-19,6;CL:0000988,1.09e-16,32;CL:0002032,1.09e-16,32;CL:0000037,1.09e-16,32;CL:0000837,1.09e-16,32;CL:0002320,2.36e-11,46;CL:0000134,2.36e-11,46;CL:0000219,1.54e-09,54;CL:0000815,3.50e-08,1;CL:0000792,3.50e-08,1;CL:0000625,4.10e-08,1;CL:0000945,5.62e-08,1;CL:0000236,5.62e-08,1;CL:0000826,5.62e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.13e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.36e-11,46;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0002370,1.65e-07,23;UBERON:0000974,1.65e-07,23;UBERON:0004807,1.65e-07,23;UBERON:0005058,1.65e-07,23;UBERON:0003351,1.65e-07,23;UBERON:0009113,1.65e-07,23;UBERON:0003295,1.65e-07,23;UBERON:0009722,1.65e-07,23;UBERON:0005562,1.65e-07,23;UBERON:0007690,1.65e-07,23;UBERON:0006562,3.42e-07,24;UBERON:0003408,3.42e-07,24;UBERON:0001557,3.42e-07,24;UBERON:0001042,3.42e-07,24;UBERON:0008814,3.42e-07,24;UBERON:0009145,3.42e-07,24;UBERON:0000077,9.32e-07,35|phase1_expression=0.160148847104794,0,0,0,0,0,0,5.68142623142936,9.714421828465,10.0647746318457,0.513653904676515,0.239316476986009,6.16322627752341,7.43073420561478,0.666219523631325,0.404950534779652,0,2.05050407482854,0.959801035240171,0.42438965179803,0.0850432901510698,0.297872853602656,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,4.1176204162171,0,0,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0,0.139986421625363,0,3.85899993932794,10.1550699881588,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0.554259570499814,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0.913394847343798,0.23467170806371,1.0591603543191,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0.192075457214608,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:59814599..59814619,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:59814599..59814619,- | |||
|id=chr10:59814599..59814619,- | |||
|ontology_enrichment_celltype=CL:0000838!1.31e-12!12;CL:0000084!1.32e-11!11;CL:0000827!1.32e-11!11;CL:0000542!2.77e-11!13;CL:0000051!2.77e-11!13;CL:0000791!3.64e-10!9;CL:0000789!3.64e-10!9;CL:0002420!3.64e-10!9;CL:0002419!3.64e-10!9;CL:0000790!3.64e-10!9;CL:0002031!1.87e-09!25;CL:0000624!3.79e-09!8;CL:0000988!1.19e-07!32;CL:0002032!1.19e-07!32;CL:0000037!1.19e-07!32;CL:0000566!1.19e-07!32;CL:0000837!1.19e-07!32;CL:0000738!1.34e-07!17;CL:0002087!1.34e-07!17;CL:0002320!4.13e-07!46;CL:0000134!4.13e-07!46;CL:0000893!4.78e-07!6;CL:0002489!4.78e-07!6;CL:0000898!4.78e-07!6;CL:0000809!4.78e-07!6;CL:0000810!4.78e-07!6;CL:0000895!4.78e-07!6;CL:0000808!4.78e-07!6;CL:0000894!4.78e-07!6;CL:0000806!4.78e-07!6;CL:0000807!4.78e-07!6;CL:0000805!4.78e-07!6;CL:0002425!4.78e-07!6;CL:0002436!4.78e-07!6;CL:0002427!4.78e-07!6;CL:0002428!4.78e-07!6;CL:0002429!4.78e-07!6;CL:0002433!4.78e-07!6;CL:0002431!4.78e-07!6;CL:0002432!4.78e-07!6;CL:0000219!5.02e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-37,9;CL:0000789,1.56e-37,9;CL:0002420,1.56e-37,9;CL:0002419,1.56e-37,9;CL:0000790,1.56e-37,9;CL:0000838,2.41e-36,12;CL:0000542,1.64e-33,13;CL:0000051,1.64e-33,13;CL:0000624,2.39e-31,8;CL:0000084,1.18e-30,11;CL:0000827,1.18e-30,11;CL:0000738,1.67e-25,17;CL:0002087,1.67e-25,17;CL:0002031,1.40e-21,25;CL:0000893,4.63e-19,6;CL:0002489,4.63e-19,6;CL:0000898,4.63e-19,6;CL:0000809,4.63e-19,6;CL:0000810,4.63e-19,6;CL:0000895,4.63e-19,6;CL:0000808,4.63e-19,6;CL:0000894,4.63e-19,6;CL:0000806,4.63e-19,6;CL:0000807,4.63e-19,6;CL:0000805,4.63e-19,6;CL:0002425,4.63e-19,6;CL:0002436,4.63e-19,6;CL:0002427,4.63e-19,6;CL:0002428,4.63e-19,6;CL:0002429,4.63e-19,6;CL:0002433,4.63e-19,6;CL:0002431,4.63e-19,6;CL:0002432,4.63e-19,6;CL:0000988,1.09e-16,32;CL:0002032,1.09e-16,32;CL:0000037,1.09e-16,32;CL:0000837,1.09e-16,32;CL:0002320,2.36e-11,46;CL:0000134,2.36e-11,46;CL:0000219,1.54e-09,54;CL:0000815,3.50e-08,1;CL:0000792,3.50e-08,1;CL:0000625,4.10e-08,1;CL:0000945,5.62e-08,1;CL:0000236,5.62e-08,1;CL:0000826,5.62e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.13e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.36e-11,46;UBERON:0000029,7.68e-08,1;UBERON:0001097,7.68e-08,1;UBERON:0003968,7.68e-08,1;UBERON:0001467,7.68e-08,1;UBERON:0002370,1.65e-07,23;UBERON:0000974,1.65e-07,23;UBERON:0004807,1.65e-07,23;UBERON:0005058,1.65e-07,23;UBERON:0003351,1.65e-07,23;UBERON:0009113,1.65e-07,23;UBERON:0003295,1.65e-07,23;UBERON:0009722,1.65e-07,23;UBERON:0005562,1.65e-07,23;UBERON:0007690,1.65e-07,23;UBERON:0006562,3.42e-07,24;UBERON:0003408,3.42e-07,24;UBERON:0001557,3.42e-07,24;UBERON:0001042,3.42e-07,24;UBERON:0008814,3.42e-07,24;UBERON:0009145,3.42e-07,24;UBERON:0000077,9.32e-07,35 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,5.68142623142936,9.714421828465,10.0647746318457,0.513653904676515,0.239316476986009,6.16322627752341,7.43073420561478,0.666219523631325,0.404950534779652,0,2.05050407482854,0.959801035240171,0.42438965179803,0.0850432901510698,0.297872853602656,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,4.1176204162171,0,0,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0,0.139986421625363,0,3.85899993932794,10.1550699881588,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0.554259570499814,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0.913394847343798,0.23467170806371,1.0591603543191,0.220528398054962,0.32977250588296,0,0.120625849856312,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0.192075457214608,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:59814599..59814619,- | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p@chr10:59814599..59814619, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59814599..59814619, - |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.36e-11 | 46 |
lymph node | 7.68e-08 | 1 |
axillary lymph node | 7.68e-08 | 1 |
peripheral lymph node | 7.68e-08 | 1 |
shoulder | 7.68e-08 | 1 |
thymus | 1.65e-07 | 23 |
neck | 1.65e-07 | 23 |
respiratory system epithelium | 1.65e-07 | 23 |
hemolymphoid system gland | 1.65e-07 | 23 |
pharyngeal epithelium | 1.65e-07 | 23 |
thymic region | 1.65e-07 | 23 |
pharyngeal gland | 1.65e-07 | 23 |
entire pharyngeal arch endoderm | 1.65e-07 | 23 |
thymus primordium | 1.65e-07 | 23 |
early pharyngeal endoderm | 1.65e-07 | 23 |
pharynx | 3.42e-07 | 24 |
gland of gut | 3.42e-07 | 24 |
upper respiratory tract | 3.42e-07 | 24 |
chordate pharynx | 3.42e-07 | 24 |
pharyngeal arch system | 3.42e-07 | 24 |
pharyngeal region of foregut | 3.42e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 9.32e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.