FFCP PHASE1:Hg19::chr2:241396134..241396151,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=B5MC12|association_with_transcript=-3bp_to_ENST00000404327_5end|coexpression_cluster_id=C4209|description=CAGE_peak_1_at_ENST00000404327_5end|id=chr2:241396134..241396151,-|ontology_enrichment_celltype=CL:0000039!1.38e-08!7;CL:0000586!1.38e-08!7|ontology_enrichment_celltype_v019=CL:0000349;7.23e-26;19!CL:0000039;4.03e-15;7!CL:0000586;4.03e-15;7!CL:0002577;6.92e-14;3!CL:0002541;8.21e-14;3!CL:0002536;8.20e-10;2!CL:0000575;9.82e-09;2!CL:0002537;1.22e-08;5!CL:0002681;3.62e-08;12!CL:0002584;3.62e-08;12|ontology_enrichment_celltype_v019_2=CL:0000349,6.73e-26,19;CL:0000039,4.03e-15,7;CL:0000586,4.03e-15,7;CL:0002577,6.22e-14,3;CL:0002541,8.05e-14,3;CL:0002536,8.39e-10,2;CL:0000575,9.82e-09,2;CL:0002537,1.20e-08,5;CL:0002681,3.89e-08,12;CL:0002584,3.89e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!9.16e-17!14;UBERON:0000158!9.16e-17!14;UBERON:0007023!1.42e-16!115;UBERON:0003124!1.94e-12!7;UBERON:0000064!5.64e-11!219;UBERON:0000478!7.93e-10!24;UBERON:0001987!7.73e-08!4;UBERON:0004340!7.73e-08!4;UBERON:0000062!8.88e-08!511;UBERON:0000153!1.34e-07!129;UBERON:0007811!1.34e-07!129;UBERON:0002616!1.48e-07!59;UBERON:0001049!3.31e-07!57;UBERON:0005068!3.31e-07!57;UBERON:0006241!3.31e-07!57;UBERON:0007135!3.31e-07!57;UBERON:0000464!4.27e-07!104;UBERON:0003080!8.01e-07!42|ontology_enrichment_uberon_v019=UBERON:0000478;4.25e-28;24!UBERON:0005631;3.97e-27;10!UBERON:0000158;3.97e-27;10!UBERON:0001987;6.31e-18;4!UBERON:0000305;9.06e-16;7!UBERON:0003124;8.21e-14;3!UBERON:0000920;8.21e-14;3!UBERON:0000369;7.69e-10;4!UBERON:0002435;7.69e-10;4!UBERON:0000204;7.69e-10;4!UBERON:0001829;9.82e-09;2!UBERON:0001225;3.62e-08;12!UBERON:0008987;3.62e-08;12|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.08e-43,14;UBERON:0000158,6.08e-43,14;UBERON:0003124,4.99e-30,7;UBERON:0000478,4.03e-28,24;UBERON:0001987,5.68e-18,4;UBERON:0004340,5.68e-18,4;UBERON:0000305,9.07e-16,7;UBERON:0000920,8.05e-14,3;UBERON:0004871,9.31e-14,8;UBERON:0000369,8.70e-10,4;UBERON:0002435,8.70e-10,4;UBERON:0000204,8.70e-10,4;UBERON:0010082,8.70e-10,4;UBERON:0001829,1.20e-08,2;UBERON:0001225,3.89e-08,12;UBERON:0008987,3.89e-08,12;UBERON:0004923,4.92e-07,66;UBERON:0006554,6.22e-07,47;UBERON:0000995,7.70e-07,21;UBERON:0001008,9.46e-07,48|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,1.72013755551056,3.48900583986214,12.2327168392896,18.1999214977633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0,0,0,3.1608175918371,7.72637545885385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,5.75942385747893,38.2801510874143,22.9816622930557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.644566922551274,0,0,0,4.06079651616671,3.23464415838542,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0,0,0,5.66725564062472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,29.8430605922113,11.5816225524729,68.803997270228,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0.762760950878299,0,0,0,0,0,6.0298219312704,0,0,0,0.658156191461918,0,0,0.307801034015188,0,15.9089094027761,12.7455855061876,22.1640638720896,25.5200927785536,4.48828207669125,23.9865649208386,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,68.7296563807118,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0.189932387867636,1.56441106187842,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,17.3720730434122,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=B5MC12 | |||
|association_with_transcript=-3bp_to_ENST00000404327_5end | |||
|coexpression_cluster_id=C4209 | |||
|description=CAGE_peak_1_at_ENST00000404327_5end | |||
|id=chr2:241396134..241396151,- | |||
|ontology_enrichment_celltype=CL:0000039!1.38e-08!7;CL:0000586!1.38e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.23e-26;19!CL:0000039;4.03e-15;7!CL:0000586;4.03e-15;7!CL:0002577;6.92e-14;3!CL:0002541;8.21e-14;3!CL:0002536;8.20e-10;2!CL:0000575;9.82e-09;2!CL:0002537;1.22e-08;5!CL:0002681;3.62e-08;12!CL:0002584;3.62e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.73e-26,19;CL:0000039,4.03e-15,7;CL:0000586,4.03e-15,7;CL:0002577,6.22e-14,3;CL:0002541,8.05e-14,3;CL:0002536,8.39e-10,2;CL:0000575,9.82e-09,2;CL:0002537,1.20e-08,5;CL:0002681,3.89e-08,12;CL:0002584,3.89e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.16e-17!14;UBERON:0000158!9.16e-17!14;UBERON:0007023!1.42e-16!115;UBERON:0003124!1.94e-12!7;UBERON:0000064!5.64e-11!219;UBERON:0000478!7.93e-10!24;UBERON:0001987!7.73e-08!4;UBERON:0004340!7.73e-08!4;UBERON:0000062!8.88e-08!511;UBERON:0000153!1.34e-07!129;UBERON:0007811!1.34e-07!129;UBERON:0002616!1.48e-07!59;UBERON:0001049!3.31e-07!57;UBERON:0005068!3.31e-07!57;UBERON:0006241!3.31e-07!57;UBERON:0007135!3.31e-07!57;UBERON:0000464!4.27e-07!104;UBERON:0003080!8.01e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.25e-28;24!UBERON:0005631;3.97e-27;10!UBERON:0000158;3.97e-27;10!UBERON:0001987;6.31e-18;4!UBERON:0000305;9.06e-16;7!UBERON:0003124;8.21e-14;3!UBERON:0000920;8.21e-14;3!UBERON:0000369;7.69e-10;4!UBERON:0002435;7.69e-10;4!UBERON:0000204;7.69e-10;4!UBERON:0001829;9.82e-09;2!UBERON:0001225;3.62e-08;12!UBERON:0008987;3.62e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.08e-43,14;UBERON:0000158,6.08e-43,14;UBERON:0003124,4.99e-30,7;UBERON:0000478,4.03e-28,24;UBERON:0001987,5.68e-18,4;UBERON:0004340,5.68e-18,4;UBERON:0000305,9.07e-16,7;UBERON:0000920,8.05e-14,3;UBERON:0004871,9.31e-14,8;UBERON:0000369,8.70e-10,4;UBERON:0002435,8.70e-10,4;UBERON:0000204,8.70e-10,4;UBERON:0010082,8.70e-10,4;UBERON:0001829,1.20e-08,2;UBERON:0001225,3.89e-08,12;UBERON:0008987,3.89e-08,12;UBERON:0004923,4.92e-07,66;UBERON:0006554,6.22e-07,47;UBERON:0000995,7.70e-07,21;UBERON:0001008,9.46e-07,48 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,1.72013755551056,3.48900583986214,12.2327168392896,18.1999214977633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0,0,0,3.1608175918371,7.72637545885385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,5.75942385747893,38.2801510874143,22.9816622930557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.644566922551274,0,0,0,4.06079651616671,3.23464415838542,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0,0,0,5.66725564062472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,29.8430605922113,11.5816225524729,68.803997270228,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0.762760950878299,0,0,0,0,0,6.0298219312704,0,0,0,0.658156191461918,0,0,0.307801034015188,0,15.9089094027761,12.7455855061876,22.1640638720896,25.5200927785536,4.48828207669125,23.9865649208386,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,68.7296563807118,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0.189932387867636,1.56441106187842,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,17.3720730434122,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,2.11444506695002,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,0,0.205116364240755,0,0.345786262321089,0.161475645631851,0,0,0.235939446695481,0,0.808679663052368,0,0,0,0.225630985047772,0,0,38.2383773942877,0.163771917510097,1.33070477595341,0.270150338473579,0,0,0.19024743058172,0,1.09651553371436,0,0,9.58218207296965,0,0,0.606965604236632,0.227662191351298,16.7647479607387,0,0,0.271878931907327,0.197318320688547,0,0,0.863424021355654,5.02769887731206,5.32517110296199,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,3.44181887056222,0,0,0,1.14553434272025,0,0,0.335566295393377,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,1.37618785021362,0,0,0.543931921527318,0.872701380680755,0,0,0,0,0.126166424835079,0,0,3.05966489225945,0.534434810531121,3.85958578046349,0,0.227336094654718,0,0,0.103432995861895,0.426467963801962,0.714193294391221,0.129177819672012,0.0620747142958579,0,0.190941474834495,0.202117188958219,0,0.684466602170562,0.875576689189638,0.860666464712116,1.66330178273007,0,0,0,0,7.03922827210363,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p1@ENST00000404327 | |||
}} |
Revision as of 17:45, 12 September 2013
Short description: | p1@ENST00000404327 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000404327_5end |
Coexpression cluster: | C4209_amniotic_endometrioid_Placental_pancreatic_chorionic_heart_placenta |
Association with transcript: | -3bp_to_ENST00000404327_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.73e-26 | 19 |
germ line cell | 4.03e-15 | 7 |
germ cell | 4.03e-15 | 7 |
placental epithelial cell | 6.22e-14 | 3 |
chorionic membrane mesenchymal stem cell | 8.05e-14 | 3 |
amniotic epithelial cell | 8.39e-10 | 2 |
corneal epithelial cell | 9.82e-09 | 2 |
amnion mesenchymal stem cell | 1.20e-08 | 5 |
kidney cortical cell | 3.89e-08 | 12 |
renal cortical epithelial cell | 3.89e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.08e-43 | 14 |
membranous layer | 6.08e-43 | 14 |
chorion | 4.99e-30 | 7 |
extraembryonic structure | 4.03e-28 | 24 |
placenta | 5.68e-18 | 4 |
allantois | 5.68e-18 | 4 |
amnion | 9.07e-16 | 7 |
egg chorion | 8.05e-14 | 3 |
somatic layer of lateral plate mesoderm | 9.31e-14 | 8 |
corpus striatum | 8.70e-10 | 4 |
striatum | 8.70e-10 | 4 |
ventral part of telencephalon | 8.70e-10 | 4 |
future corpus striatum | 8.70e-10 | 4 |
major salivary gland | 1.20e-08 | 2 |
cortex of kidney | 3.89e-08 | 12 |
renal parenchyma | 3.89e-08 | 12 |
organ component layer | 4.92e-07 | 66 |
urinary system structure | 6.22e-07 | 47 |
uterus | 7.70e-07 | 21 |
renal system | 9.46e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.