FFCP PHASE1:Mm9::chr11:118063842..118063885,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19157|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-58bp_to_uc007mos.1_5end|description=CAGE_peak_6_at_Cyth1_5end|id=chr11:118063842..118063885,-|ontology_enrichment_celltype=CL:0000540!4.89e-15!33;CL:0000047!4.89e-15!33;CL:0000031!4.89e-15!33;CL:0000404!4.89e-15!33;CL:0000221!3.67e-12!44;CL:0000133!3.67e-12!44;CL:0002319!7.63e-12!43;CL:0000393!1.79e-10!39;CL:0000211!1.79e-10!39;CL:0000117!3.25e-10!23;CL:0000337!3.25e-10!23;CL:0000055!5.04e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.35e-18,33;CL:0000047,3.35e-18,33;CL:0000031,3.35e-18,33;CL:0000404,3.35e-18,33;CL:0000393,3.64e-14,39;CL:0000211,3.64e-14,39;CL:0000221,5.87e-14,44;CL:0000133,5.87e-14,44;CL:0002319,2.03e-13,43;CL:0000117,5.90e-10,23;CL:0000337,5.90e-10,23;CL:0000107,1.93e-09,9;CL:0002321,1.39e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.77e-26!73;UBERON:0005743!6.77e-26!73;UBERON:0000073!1.16e-24!75;UBERON:0001016!1.16e-24!75;UBERON:0004121!7.21e-21!102;UBERON:0000924!7.21e-21!102;UBERON:0006601!7.21e-21!102;UBERON:0000033!2.85e-17!63;UBERON:0002346!6.00e-17!71;UBERON:0003075!6.00e-17!71;UBERON:0007284!6.00e-17!71;UBERON:0000955!6.51e-17!50;UBERON:0006238!6.51e-17!50;UBERON:0001049!1.37e-16!52;UBERON:0005068!1.37e-16!52;UBERON:0006241!1.37e-16!52;UBERON:0007135!1.37e-16!52;UBERON:0002616!2.60e-16!49;UBERON:0000025!5.68e-14!114;UBERON:0004111!1.63e-13!122;UBERON:0003056!1.26e-12!49;UBERON:0003080!1.55e-12!40;UBERON:0002020!3.70e-12!34;UBERON:0002780!6.73e-12!39;UBERON:0001890!6.73e-12!39;UBERON:0006240!6.73e-12!39;UBERON:0002791!9.65e-11!29;UBERON:0003528!9.65e-11!29;UBERON:0001893!9.65e-11!29;UBERON:0000956!1.48e-07!21;UBERON:0001869!1.48e-07!21;UBERON:0000203!1.48e-07!21;UBERON:0007811!2.24e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.92e-32,73;UBERON:0001016,1.47e-30,75;UBERON:0004121,1.70e-27,95;UBERON:0000924,1.70e-27,95;UBERON:0006601,1.70e-27,95;UBERON:0000073,3.66e-19,54;UBERON:0002346,1.34e-18,64;UBERON:0003075,1.34e-18,64;UBERON:0007284,1.34e-18,64;UBERON:0001049,3.90e-17,52;UBERON:0005068,3.90e-17,52;UBERON:0006241,3.90e-17,52;UBERON:0007135,3.90e-17,52;UBERON:0000955,4.52e-17,47;UBERON:0006238,4.52e-17,47;UBERON:0010371,9.77e-17,73;UBERON:0002616,3.94e-16,46;UBERON:0011216,4.43e-15,194;UBERON:0003080,3.14e-13,40;UBERON:0003528,2.02e-12,29;UBERON:0002791,2.02e-12,29;UBERON:0001893,2.02e-12,29;UBERON:0010314,2.83e-12,92;UBERON:0003056,2.98e-12,49;UBERON:0002780,3.04e-12,39;UBERON:0001890,3.04e-12,39;UBERON:0006240,3.04e-12,39;UBERON:0002020,3.82e-12,34;UBERON:0004111,1.61e-09,122;UBERON:0002410,1.93e-09,9;UBERON:0000025,3.21e-09,114;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10;UBERON:0002420,1.92e-07,8;UBERON:0007245,1.92e-07,8;UBERON:0010009,1.92e-07,8;UBERON:0010011,1.92e-07,8;UBERON:0000454,1.92e-07,8;UBERON:0000010,2.44e-07,11;UBERON:0000956,5.54e-07,21;UBERON:0001869,5.54e-07,21;UBERON:0000203,5.54e-07,21;UBERON:0002950,8.60e-07,4;UBERON:0001891,8.60e-07,4;UBERON:0009616,8.60e-07,4;UBERON:0010286,8.60e-07,4|phase1_expression=1.28119077683835,1.39590163055744,0,0.30246421130683,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,1.75991665072747,0.91763712426868,0.57423196411502,0,0.430942465371778,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,1.26766280701236,0,0,0,0,0,0.599200221036809,3.07374644257244,1.45165457231869,1.75507719831198,0.420649922702764,1.99955689082663,1.98781686856452,0.734944795289724,0.958454710182364,0.919218786610021,14.3150645299205,10.9811110753261,11.981309593987,1.97829431595291,1.09785172322892,2.08365348222704,17.8677119360884,13.5063026407603,14.8214300343506,0.883885756421003,0.854230084794618,0.559198337475902,0,0.226714680320357,0,0,1.3599426674155,0,2.59910566979068,1.34408066129201,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.452167921657868,0.587943535678524,0.376999773989026,1.48316980640624,0.144599356919912,0,0.647067399789637,0.220841518460394,0.484875253135222,0,10.5401086924157,10.4723353406728,0.510914110417183,0.11981512450592,0,0,13.481157546434,13.2675174817402,0.125654352112864,3.82413504423008,6.39288643325826,12.0517065844545,13.4660248346239,0.509196819251581,0.746441823660558,0.505445516867349,0.841767423545896,0.260240885925407,0,0.360124259610698,0.452114453507145,1.02054748726992,0.2562274405697,1.03071897015702,3.3631438196072,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.154267112887378,0.930135779001631,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,1.13496333364198,0.730999937126662,0.658650345873152,0.5368256750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| ||
|EntrezGene=19157 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_uc007mos.1_5end | |||
|description=CAGE_peak_6_at_Cyth1_5end | |||
|id=chr11:118063842..118063885,- | |||
|ontology_enrichment_celltype=CL:0000540!4.89e-15!33;CL:0000047!4.89e-15!33;CL:0000031!4.89e-15!33;CL:0000404!4.89e-15!33;CL:0000221!3.67e-12!44;CL:0000133!3.67e-12!44;CL:0002319!7.63e-12!43;CL:0000393!1.79e-10!39;CL:0000211!1.79e-10!39;CL:0000117!3.25e-10!23;CL:0000337!3.25e-10!23;CL:0000055!5.04e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.35e-18,33;CL:0000047,3.35e-18,33;CL:0000031,3.35e-18,33;CL:0000404,3.35e-18,33;CL:0000393,3.64e-14,39;CL:0000211,3.64e-14,39;CL:0000221,5.87e-14,44;CL:0000133,5.87e-14,44;CL:0002319,2.03e-13,43;CL:0000117,5.90e-10,23;CL:0000337,5.90e-10,23;CL:0000107,1.93e-09,9;CL:0002321,1.39e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.77e-26!73;UBERON:0005743!6.77e-26!73;UBERON:0000073!1.16e-24!75;UBERON:0001016!1.16e-24!75;UBERON:0004121!7.21e-21!102;UBERON:0000924!7.21e-21!102;UBERON:0006601!7.21e-21!102;UBERON:0000033!2.85e-17!63;UBERON:0002346!6.00e-17!71;UBERON:0003075!6.00e-17!71;UBERON:0007284!6.00e-17!71;UBERON:0000955!6.51e-17!50;UBERON:0006238!6.51e-17!50;UBERON:0001049!1.37e-16!52;UBERON:0005068!1.37e-16!52;UBERON:0006241!1.37e-16!52;UBERON:0007135!1.37e-16!52;UBERON:0002616!2.60e-16!49;UBERON:0000025!5.68e-14!114;UBERON:0004111!1.63e-13!122;UBERON:0003056!1.26e-12!49;UBERON:0003080!1.55e-12!40;UBERON:0002020!3.70e-12!34;UBERON:0002780!6.73e-12!39;UBERON:0001890!6.73e-12!39;UBERON:0006240!6.73e-12!39;UBERON:0002791!9.65e-11!29;UBERON:0003528!9.65e-11!29;UBERON:0001893!9.65e-11!29;UBERON:0000956!1.48e-07!21;UBERON:0001869!1.48e-07!21;UBERON:0000203!1.48e-07!21;UBERON:0007811!2.24e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.92e-32,73;UBERON:0001016,1.47e-30,75;UBERON:0004121,1.70e-27,95;UBERON:0000924,1.70e-27,95;UBERON:0006601,1.70e-27,95;UBERON:0000073,3.66e-19,54;UBERON:0002346,1.34e-18,64;UBERON:0003075,1.34e-18,64;UBERON:0007284,1.34e-18,64;UBERON:0001049,3.90e-17,52;UBERON:0005068,3.90e-17,52;UBERON:0006241,3.90e-17,52;UBERON:0007135,3.90e-17,52;UBERON:0000955,4.52e-17,47;UBERON:0006238,4.52e-17,47;UBERON:0010371,9.77e-17,73;UBERON:0002616,3.94e-16,46;UBERON:0011216,4.43e-15,194;UBERON:0003080,3.14e-13,40;UBERON:0003528,2.02e-12,29;UBERON:0002791,2.02e-12,29;UBERON:0001893,2.02e-12,29;UBERON:0010314,2.83e-12,92;UBERON:0003056,2.98e-12,49;UBERON:0002780,3.04e-12,39;UBERON:0001890,3.04e-12,39;UBERON:0006240,3.04e-12,39;UBERON:0002020,3.82e-12,34;UBERON:0004111,1.61e-09,122;UBERON:0002410,1.93e-09,9;UBERON:0000025,3.21e-09,114;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10;UBERON:0002420,1.92e-07,8;UBERON:0007245,1.92e-07,8;UBERON:0010009,1.92e-07,8;UBERON:0010011,1.92e-07,8;UBERON:0000454,1.92e-07,8;UBERON:0000010,2.44e-07,11;UBERON:0000956,5.54e-07,21;UBERON:0001869,5.54e-07,21;UBERON:0000203,5.54e-07,21;UBERON:0002950,8.60e-07,4;UBERON:0001891,8.60e-07,4;UBERON:0009616,8.60e-07,4;UBERON:0010286,8.60e-07,4 | |||
|phase1_expression=1.28119077683835,1.39590163055744,0,0.30246421130683,0.500895729946347,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,1.75991665072747,0.91763712426868,0.57423196411502,0,0.430942465371778,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,1.26766280701236,0,0,0,0,0,0.599200221036809,3.07374644257244,1.45165457231869,1.75507719831198,0.420649922702764,1.99955689082663,1.98781686856452,0.734944795289724,0.958454710182364,0.919218786610021,14.3150645299205,10.9811110753261,11.981309593987,1.97829431595291,1.09785172322892,2.08365348222704,17.8677119360884,13.5063026407603,14.8214300343506,0.883885756421003,0.854230084794618,0.559198337475902,0,0.226714680320357,0,0,1.3599426674155,0,2.59910566979068,1.34408066129201,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.452167921657868,0.587943535678524,0.376999773989026,1.48316980640624,0.144599356919912,0,0.647067399789637,0.220841518460394,0.484875253135222,0,10.5401086924157,10.4723353406728,0.510914110417183,0.11981512450592,0,0,13.481157546434,13.2675174817402,0.125654352112864,3.82413504423008,6.39288643325826,12.0517065844545,13.4660248346239,0.509196819251581,0.746441823660558,0.505445516867349,0.841767423545896,0.260240885925407,0,0.360124259610698,0.452114453507145,1.02054748726992,0.2562274405697,1.03071897015702,3.3631438196072,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.154267112887378,0.930135779001631,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,1.13496333364198,0.730999937126662,0.658650345873152,0.536825675041487,7.78072809687271,0.720332286654991,1.98251269790279,1.05780226665418,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.667134131534611,0.760902504450237,1.42358718463353,2.30578536613615,2.01068167040216,1.59165177632921,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0.193952487167626,0.140271639780637,0,0.147610147979602,0.156998727841375,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,1.43848068725405,2.91843408195064,0.823684239564244,2.87536413054709,2.60498663367952,3.43241440426017,1.26289438973556,1.97337154874103,0.964887042726734,0.369506380333209,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0,0.195133647857799,1.26108115284953,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,10.9174401191699,18.8710815413447,0,0.252470927204373,1.26203287766503,3.51394869866975,6.24727853425117,3.34556317133573,2.67358408898873,1.69845918473299,2.02405350837447,3.21481443702443,1.58115111178609,3.53453448063988,0.141940085208269,0.35613120733451,0.651547837414304,0.659880491890142,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.36175842301515,0.720244376125241,0.517434735131018,0,0.354680467284547,0.356737635204141,0.658196082408484,1.2178597964584,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0,0.582961673259701,19.284231409093,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.138199973804424,2.86401185404534,0.316335993581135,0,0.324016022465404,0,0.655087691238533,0.269728692769641,0.330613822901344,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.496375471371293,0.194451188344048,0,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0.0762068066549998,0,0.194915761479505,0.192423683280659,0,1.13365191807606,0,0,0,0.386379188064381,0,0,0,0,0.564751842617067,3.22227665555024,2.29158205375759,1.03111909406213,3.42541259885321,6.0431511791176,4.72515750162264,1.80128481289688,3.62513927187364,2.07104124700728,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0,0,0.468207537349412,0.320125762024346,0.574354689556133,0.952587382566147,0.927074607558844,0.38581844092741,0,1.32479028120958,0.342869252385415,0.354951612318675,0.953744759789284,0.290692833264657,0.376437521661322,0.676916863133412,0.73171189149109,0,0.679020569229309,0.561142271657738,0.474540072496697,0.788035859004508,0,0.309873682371932,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.882365676478062,1.15933917810211 | |||
|short_description=p6@Cyth1 | |||
}} |
Revision as of 18:58, 12 September 2013
Short description: | p6@Cyth1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cyth1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -58bp_to_uc007mos.1_5end |
EntrezGene: | Cyth1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.35e-18 | 33 |
neuronal stem cell | 3.35e-18 | 33 |
neuroblast | 3.35e-18 | 33 |
electrically signaling cell | 3.35e-18 | 33 |
electrically responsive cell | 3.64e-14 | 39 |
electrically active cell | 3.64e-14 | 39 |
ectodermal cell | 5.87e-14 | 44 |
neurectodermal cell | 5.87e-14 | 44 |
neural cell | 2.03e-13 | 43 |
CNS neuron (sensu Vertebrata) | 5.90e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.90e-10 | 23 |
autonomic neuron | 1.93e-09 | 9 |
embryonic cell | 1.39e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.