FFCP PHASE1:Mm9::chr11:83664264..83664275,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=514|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:83664264..83664275,-|id=chr11:83664264..83664275,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!2.42e-17!85;UBERON:0002100!7.38e-15!98;UBERON:0009569!5.55e-13!66;UBERON:0001008!8.86e-13!17;UBERON:0006554!6.55e-12!16;UBERON:0004119!7.76e-12!130;UBERON:0000925!7.76e-12!130;UBERON:0006595!7.76e-12!130;UBERON:0000466!1.07e-11!79;UBERON:0001007!1.12e-11!128;UBERON:0001555!1.12e-11!128;UBERON:0007026!1.12e-11!128;UBERON:0004921!1.40e-11!126;UBERON:0004185!1.40e-11!126;UBERON:0003104!1.31e-10!131;UBERON:0009142!1.31e-10!131;UBERON:0002113!3.06e-10!14;UBERON:0003918!3.06e-10!14;UBERON:0005095!3.06e-10!14;UBERON:0007687!3.06e-10!14;UBERON:0000077!2.23e-09!97;UBERON:0000464!3.15e-08!57;UBERON:0001041!9.78e-08!92;UBERON:0001264!1.21e-07!12;UBERON:0003922!1.21e-07!12;UBERON:0002114!1.21e-07!12;UBERON:0003923!1.21e-07!12;UBERON:0003924!1.21e-07!12;UBERON:0003921!1.21e-07!12;UBERON:0005178!2.16e-07!17;UBERON:0005181!2.16e-07!17;UBERON:0002224!2.16e-07!17;UBERON:0000915!2.16e-07!17;UBERON:0008947!2.16e-07!17;UBERON:0003258!2.16e-07!17;UBERON:0002048!3.99e-07!14;UBERON:0000117!3.99e-07!14;UBERON:0000171!3.99e-07!14;UBERON:0000170!3.99e-07!14;UBERON:0005597!3.99e-07!14;UBERON:0000118!3.99e-07!14;UBERON:0005172!4.01e-07!49;UBERON:0005173!4.01e-07!49;UBERON:0002417!4.01e-07!49;UBERON:0000916!4.01e-07!49;UBERON:0005409!4.10e-07!59;UBERON:0000160!7.63e-07!43;UBERON:0001045!7.97e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.79e-33,14;UBERON:0003918,2.79e-33,14;UBERON:0011143,2.79e-33,14;UBERON:0005095,2.79e-33,14;UBERON:0007687,2.79e-33,14;UBERON:0006554,6.15e-31,18;UBERON:0001008,3.16e-29,19;UBERON:0000489,1.00e-21,21;UBERON:0005177,7.68e-15,79;UBERON:0002100,1.62e-14,90;UBERON:0005172,2.55e-12,49;UBERON:0005173,2.55e-12,49;UBERON:0002417,2.55e-12,49;UBERON:0000916,2.55e-12,49;UBERON:0003104,2.58e-11,61;UBERON:0009142,2.58e-11,61;UBERON:0009569,3.15e-10,66;UBERON:0003103,7.46e-10,43|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0.398282546508734,0,1.25673363870702,1.1270773567308,2.44381593414377,2.52138233317913,1.47285221769669,2.78240763346732,2.65698266363284,2.66897837330337,1.97435462274881,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.509235257325564,0.234690248288502,0.502518772325447,0.238043640886014,0.585400943573396,0.472905432318573,0.44292937929755,0.956728611944923,0.163863314715738,1.03610989119537,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.728341908464944,0.604647113929502,0.188605079755898,0,1.22974059177571,0.516856586336442,1.81766864738753,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,1.32317038832977,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0,0.388844919875379,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,1.12609485270709,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr11:83664264..83664275,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=514 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:83664264..83664275,- | |||
|id=chr11:83664264..83664275,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!2.42e-17!85;UBERON:0002100!7.38e-15!98;UBERON:0009569!5.55e-13!66;UBERON:0001008!8.86e-13!17;UBERON:0006554!6.55e-12!16;UBERON:0004119!7.76e-12!130;UBERON:0000925!7.76e-12!130;UBERON:0006595!7.76e-12!130;UBERON:0000466!1.07e-11!79;UBERON:0001007!1.12e-11!128;UBERON:0001555!1.12e-11!128;UBERON:0007026!1.12e-11!128;UBERON:0004921!1.40e-11!126;UBERON:0004185!1.40e-11!126;UBERON:0003104!1.31e-10!131;UBERON:0009142!1.31e-10!131;UBERON:0002113!3.06e-10!14;UBERON:0003918!3.06e-10!14;UBERON:0005095!3.06e-10!14;UBERON:0007687!3.06e-10!14;UBERON:0000077!2.23e-09!97;UBERON:0000464!3.15e-08!57;UBERON:0001041!9.78e-08!92;UBERON:0001264!1.21e-07!12;UBERON:0003922!1.21e-07!12;UBERON:0002114!1.21e-07!12;UBERON:0003923!1.21e-07!12;UBERON:0003924!1.21e-07!12;UBERON:0003921!1.21e-07!12;UBERON:0005178!2.16e-07!17;UBERON:0005181!2.16e-07!17;UBERON:0002224!2.16e-07!17;UBERON:0000915!2.16e-07!17;UBERON:0008947!2.16e-07!17;UBERON:0003258!2.16e-07!17;UBERON:0002048!3.99e-07!14;UBERON:0000117!3.99e-07!14;UBERON:0000171!3.99e-07!14;UBERON:0000170!3.99e-07!14;UBERON:0005597!3.99e-07!14;UBERON:0000118!3.99e-07!14;UBERON:0005172!4.01e-07!49;UBERON:0005173!4.01e-07!49;UBERON:0002417!4.01e-07!49;UBERON:0000916!4.01e-07!49;UBERON:0005409!4.10e-07!59;UBERON:0000160!7.63e-07!43;UBERON:0001045!7.97e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.79e-33,14;UBERON:0003918,2.79e-33,14;UBERON:0011143,2.79e-33,14;UBERON:0005095,2.79e-33,14;UBERON:0007687,2.79e-33,14;UBERON:0006554,6.15e-31,18;UBERON:0001008,3.16e-29,19;UBERON:0000489,1.00e-21,21;UBERON:0005177,7.68e-15,79;UBERON:0002100,1.62e-14,90;UBERON:0005172,2.55e-12,49;UBERON:0005173,2.55e-12,49;UBERON:0002417,2.55e-12,49;UBERON:0000916,2.55e-12,49;UBERON:0003104,2.58e-11,61;UBERON:0009142,2.58e-11,61;UBERON:0009569,3.15e-10,66;UBERON:0003103,7.46e-10,43 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0.398282546508734,0,1.25673363870702,1.1270773567308,2.44381593414377,2.52138233317913,1.47285221769669,2.78240763346732,2.65698266363284,2.66897837330337,1.97435462274881,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0.162964976442026,0.509235257325564,0.234690248288502,0.502518772325447,0.238043640886014,0.585400943573396,0.472905432318573,0.44292937929755,0.956728611944923,0.163863314715738,1.03610989119537,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.728341908464944,0.604647113929502,0.188605079755898,0,1.22974059177571,0.516856586336442,1.81766864738753,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,1.32317038832977,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0,0.388844919875379,0,0,0,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,1.12609485270709,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:83664264..83664275,- | |||
}} |
Revision as of 21:12, 12 September 2013
Short description: | p@chr11:83664264..83664275, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:83664264..83664275, - |
Coexpression cluster: | MCL_coexpression_mm9:514 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.79e-33 | 14 |
kidney mesenchyme | 2.79e-33 | 14 |
upper urinary tract | 2.79e-33 | 14 |
kidney rudiment | 2.79e-33 | 14 |
kidney field | 2.79e-33 | 14 |
urinary system structure | 6.15e-31 | 18 |
renal system | 3.16e-29 | 19 |
cavitated compound organ | 1.00e-21 | 21 |
trunk region element | 7.68e-15 | 79 |
trunk | 1.62e-14 | 90 |
abdomen element | 2.55e-12 | 49 |
abdominal segment element | 2.55e-12 | 49 |
abdominal segment of trunk | 2.55e-12 | 49 |
abdomen | 2.55e-12 | 49 |
mesenchyme | 2.58e-11 | 61 |
entire embryonic mesenchyme | 2.58e-11 | 61 |
subdivision of trunk | 3.15e-10 | 66 |
compound organ | 7.46e-10 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.