FFCP PHASE1:Mm9::chr11:94254231..94254297,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76408|HGNC=|MCL_coexpression_id=1309|UniProt=B2RX12|association_with_transcript=0bp_to_ENSMUST00000021231,ENSMUST00000151124,NM_029600,uc007kym.1,uc007kyn.1,uc007kyo.1,uc011ycu.1_5end|description=CAGE_peak_1_at_Abcc3_5end|id=chr11:94254231..94254297,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.10e-22!130;UBERON:0000925!3.10e-22!130;UBERON:0006595!3.10e-22!130;UBERON:0001007!3.98e-22!128;UBERON:0001555!3.98e-22!128;UBERON:0007026!3.98e-22!128;UBERON:0004921!6.07e-21!126;UBERON:0004185!6.07e-21!126;UBERON:0009569!9.92e-17!66;UBERON:0005177!1.33e-13!85;UBERON:0005409!1.49e-13!59;UBERON:0005172!2.12e-13!49;UBERON:0005173!2.12e-13!49;UBERON:0002417!2.12e-13!49;UBERON:0000916!2.12e-13!49;UBERON:0003104!4.04e-11!131;UBERON:0009142!4.04e-11!131;UBERON:0009854!4.41e-11!23;UBERON:0009856!4.41e-11!23;UBERON:0000466!1.10e-10!79;UBERON:0000077!1.20e-10!97;UBERON:0002100!1.95e-10!98;UBERON:0002107!2.03e-10!22;UBERON:0007499!2.03e-10!22;UBERON:0006925!2.03e-10!22;UBERON:0009497!2.03e-10!22;UBERON:0000015!2.03e-10!22;UBERON:0002423!2.03e-10!22;UBERON:0006235!2.03e-10!22;UBERON:0008835!2.03e-10!22;UBERON:0003894!2.03e-10!22;UBERON:0004161!2.03e-10!22;UBERON:0008836!2.03e-10!22;UBERON:0001041!1.67e-09!92;UBERON:0002365!1.68e-09!25;UBERON:0002330!1.68e-09!25;UBERON:0000160!4.45e-09!43;UBERON:0000926!1.08e-08!193;UBERON:0004120!1.08e-08!193;UBERON:0006603!1.08e-08!193;UBERON:0004923!1.46e-08!24;UBERON:0000481!9.24e-08!230;UBERON:0005911!1.02e-07!69;UBERON:0000344!1.10e-07!15;UBERON:0005256!6.80e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.23e-23,118;UBERON:0000925,5.23e-23,118;UBERON:0006595,5.23e-23,118;UBERON:0001007,6.22e-23,116;UBERON:0001555,6.22e-23,116;UBERON:0007026,6.22e-23,116;UBERON:0004921,1.00e-21,114;UBERON:0005177,5.32e-17,79;UBERON:0009569,7.24e-17,66;UBERON:0005409,1.59e-14,47;UBERON:0002100,4.33e-14,90;UBERON:0005172,1.66e-13,49;UBERON:0005173,1.66e-13,49;UBERON:0002417,1.66e-13,49;UBERON:0000916,1.66e-13,49;UBERON:0009854,3.62e-11,23;UBERON:0009856,3.62e-11,23;UBERON:0002107,1.69e-10,22;UBERON:0007499,1.69e-10,22;UBERON:0006925,1.69e-10,22;UBERON:0009497,1.69e-10,22;UBERON:0000015,1.69e-10,22;UBERON:0002423,1.69e-10,22;UBERON:0006235,1.69e-10,22;UBERON:0008835,1.69e-10,22;UBERON:0003894,1.69e-10,22;UBERON:0004161,1.69e-10,22;UBERON:0008836,1.69e-10,22;UBERON:0000160,4.78e-10,31;UBERON:0001041,4.82e-10,80;UBERON:0002365,1.43e-09,25;UBERON:0002330,1.43e-09,25;UBERON:0004923,1.26e-08,24;UBERON:0003104,1.57e-08,61;UBERON:0009142,1.57e-08,61;UBERON:0005911,2.04e-08,69;UBERON:0005256,5.77e-08,45;UBERON:0000344,9.72e-08,15|phase1_expression=1.12104192973356,103.296720661251,74.6198752598839,65.3322696422753,43.0770327753859,38.7801118116465,50.6939430092291,0.258246646883153,0,0,0,0,0,0,17.6548173762301,6.47920855647443,9.79386629379405,5.8360500591274,7.40417941470989,6.36584477697045,21.0907359574653,0,0,93.2755824885561,95.6636702050099,73.5016914067226,83.9985892510196,64.8568410384526,82.0901172051535,62.2514420507029,99.1135382629212,0,0,0,18.1976520443303,14.2961795008303,11.637653306955,0.418531630736908,1.5626706890476,0.523523743973798,0,1.36609096991689,0.485510353031154,0.125896817975577,0.304130793658544,0,0.782391344348039,0,0.439372365468944,0.194429899074283,2.09979632438044,1.43752564364972,0,0,0.336093799142464,5.14518872071894,8.02293631828519,5.15672092277442,0.202316460859598,1.05798195854407,0.633831403506179,1.69422266034566,3.55717918444456,115.187163812019,194.806673425694,134.991221839759,43.1424159146503,30.3532461204028,0.311068836925433,0.810035629990144,0.841299845405528,0,1.98781686856452,0.367472397644862,0.670918297127655,0,1.10115880999389,1.0214987046815,1.0752457327937,0.131886287730194,0.731901148819277,1.04182674111352,1.11673199600552,2.25105044012672,1.37518422999129,0.589257170947335,1.28134512719193,0.745597783301202,0.302904773332736,0.831287161174641,29.8560423362728,80.8798444362503,149.593693415705,280.105956460027,588.047657790141,548.384909807139,111.231980744347,0,0,0,0.281686839553361,0,0,0,12.7729714196616,10.1343946190039,10.1104889002957,129.94125512029,13.4647699496529,18.7037095221679,3.64319186208885,5.48037860961854,7.14908041493781,5.87818298155228,5.64425794251383,4.27266410520897,5.19109432242185,1.59059292611903,19.4614321428972,4.20593809863264,7.06692859073259,4.84875253135222,411.92579229205,0.292780797011547,0.83778682725382,130.283098156382,0,0,0.508280908292259,1.49790639404823,3.20250421973039,1.13088916901578,3.82413504423008,3.06858548796397,1.87009240103604,0.811206315338788,4.68461073711455,24.5081732101883,93.7601433788933,64.6056497571475,0.910843100738926,0.459804208866946,1.0803727788321,1.50704817835715,1.29269348387523,1.7935920839879,1.59292931751539,8.2785078636485,1.07783996466421,0,0.879755620819744,0.657587197282725,1.66828349535359,3.83077383174383,7.20237477427802,1.9903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| ||
|EntrezGene=76408 | |||
|HGNC= | |||
|MCL_coexpression_id=1309 | |||
|UniProt=B2RX12 | |||
|association_with_transcript=0bp_to_ENSMUST00000021231,ENSMUST00000151124,NM_029600,uc007kym.1,uc007kyn.1,uc007kyo.1,uc011ycu.1_5end | |||
|description=CAGE_peak_1_at_Abcc3_5end | |||
|id=chr11:94254231..94254297,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.10e-22!130;UBERON:0000925!3.10e-22!130;UBERON:0006595!3.10e-22!130;UBERON:0001007!3.98e-22!128;UBERON:0001555!3.98e-22!128;UBERON:0007026!3.98e-22!128;UBERON:0004921!6.07e-21!126;UBERON:0004185!6.07e-21!126;UBERON:0009569!9.92e-17!66;UBERON:0005177!1.33e-13!85;UBERON:0005409!1.49e-13!59;UBERON:0005172!2.12e-13!49;UBERON:0005173!2.12e-13!49;UBERON:0002417!2.12e-13!49;UBERON:0000916!2.12e-13!49;UBERON:0003104!4.04e-11!131;UBERON:0009142!4.04e-11!131;UBERON:0009854!4.41e-11!23;UBERON:0009856!4.41e-11!23;UBERON:0000466!1.10e-10!79;UBERON:0000077!1.20e-10!97;UBERON:0002100!1.95e-10!98;UBERON:0002107!2.03e-10!22;UBERON:0007499!2.03e-10!22;UBERON:0006925!2.03e-10!22;UBERON:0009497!2.03e-10!22;UBERON:0000015!2.03e-10!22;UBERON:0002423!2.03e-10!22;UBERON:0006235!2.03e-10!22;UBERON:0008835!2.03e-10!22;UBERON:0003894!2.03e-10!22;UBERON:0004161!2.03e-10!22;UBERON:0008836!2.03e-10!22;UBERON:0001041!1.67e-09!92;UBERON:0002365!1.68e-09!25;UBERON:0002330!1.68e-09!25;UBERON:0000160!4.45e-09!43;UBERON:0000926!1.08e-08!193;UBERON:0004120!1.08e-08!193;UBERON:0006603!1.08e-08!193;UBERON:0004923!1.46e-08!24;UBERON:0000481!9.24e-08!230;UBERON:0005911!1.02e-07!69;UBERON:0000344!1.10e-07!15;UBERON:0005256!6.80e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.23e-23,118;UBERON:0000925,5.23e-23,118;UBERON:0006595,5.23e-23,118;UBERON:0001007,6.22e-23,116;UBERON:0001555,6.22e-23,116;UBERON:0007026,6.22e-23,116;UBERON:0004921,1.00e-21,114;UBERON:0005177,5.32e-17,79;UBERON:0009569,7.24e-17,66;UBERON:0005409,1.59e-14,47;UBERON:0002100,4.33e-14,90;UBERON:0005172,1.66e-13,49;UBERON:0005173,1.66e-13,49;UBERON:0002417,1.66e-13,49;UBERON:0000916,1.66e-13,49;UBERON:0009854,3.62e-11,23;UBERON:0009856,3.62e-11,23;UBERON:0002107,1.69e-10,22;UBERON:0007499,1.69e-10,22;UBERON:0006925,1.69e-10,22;UBERON:0009497,1.69e-10,22;UBERON:0000015,1.69e-10,22;UBERON:0002423,1.69e-10,22;UBERON:0006235,1.69e-10,22;UBERON:0008835,1.69e-10,22;UBERON:0003894,1.69e-10,22;UBERON:0004161,1.69e-10,22;UBERON:0008836,1.69e-10,22;UBERON:0000160,4.78e-10,31;UBERON:0001041,4.82e-10,80;UBERON:0002365,1.43e-09,25;UBERON:0002330,1.43e-09,25;UBERON:0004923,1.26e-08,24;UBERON:0003104,1.57e-08,61;UBERON:0009142,1.57e-08,61;UBERON:0005911,2.04e-08,69;UBERON:0005256,5.77e-08,45;UBERON:0000344,9.72e-08,15 | |||
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| |||
|short_description=p1@Abcc3 | |||
}} | |||
Revision as of 21:31, 12 September 2013
| Short description: | p1@Abcc3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Abcc3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1309 |
| Association with transcript: | 0bp_to_ENSMUST00000021231, ENSMUST00000151124, NM_029600, uc007kym.1, uc007kyn.1, uc007kyo.1, uc011ycu.1_5end |
| EntrezGene: | Abcc3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
