FFCP PHASE1:Hg19::chr3:158546800..158546806,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C71|description=CAGE_peak_at_chr3:158546800..158546806,+|id=chr3:158546800..158546806,+|ontology_enrichment_celltype=CL:0002009!8.54e-08!65;CL:0002194!1.47e-07!63;CL:0000576!1.47e-07!63;CL:0000040!1.47e-07!63;CL:0000559!1.47e-07!63;CL:0000839!5.65e-07!70;CL:0002320!6.91e-07!365;CL:0000763!8.23e-07!112;CL:0000049!8.23e-07!112;CL:0000557!8.26e-07!71|ontology_enrichment_celltype_v019=CL:0000511;5.29e-10;1!CL:0002625;5.29e-10;1!CL:0000216;5.29e-10;1!CL:0002591;5.29e-10;1!CL:0000235;5.57e-07;6|ontology_enrichment_celltype_v019_2=CL:0000511,2.84e-10,1;CL:0002625,2.84e-10,1;CL:0000216,2.84e-10,1;CL:0002591,6.91e-10,1;CL:0002194,2.75e-08,59;CL:0000576,2.75e-08,59;CL:0000040,2.75e-08,59;CL:0000559,2.75e-08,59;CL:0002009,5.49e-08,61;CL:0000839,2.58e-07,66;CL:0000557,3.43e-07,67;CL:0000235,5.75e-07,6|ontology_enrichment_development_v019=UBERON:0003099;5.29e-10;1!UBERON:0003852;5.29e-10;1|ontology_enrichment_disease=DOID:2394!1.25e-07!14|ontology_enrichment_disease_v019=DOID:0060084;8.81e-13;3!DOID:127;8.81e-13;3!DOID:0060072;8.24e-10;4|ontology_enrichment_disease_v019_2=DOID:0060084,5.19e-13,3;DOID:127,5.19e-13,3;DOID:0060072,5.55e-10,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;5.29e-10;1!UBERON:0001343;5.29e-10;1!UBERON:0005705;5.29e-10;1!UBERON:0008193;5.29e-10;1!UBERON:0010912;5.29e-10;1!UBERON:0002514;5.29e-10;1!UBERON:0003457;5.29e-10;1!UBERON:0008907;5.29e-10;1!UBERON:0008001;5.29e-10;1!UBERON:0007213;5.29e-10;1!UBERON:0009891;5.29e-10;1!UBERON:0007914;5.29e-10;1!UBERON:0004910;5.29e-10;1!UBERON:0007375;5.29e-10;1!UBERON:0003323;5.29e-10;1!UBERON:0010258;5.29e-10;1!UBERON:0005253;5.29e-10;1!UBERON:0007842;5.29e-10;1!UBERON:0004813;5.29e-10;1!UBERON:0002397;5.29e-10;1!UBERON:0003113;5.29e-10;1!UBERON:0003277;5.29e-10;1!UBERON:0001709;5.29e-10;1!UBERON:0002244;5.29e-10;1!UBERON:0005620;5.29e-10;1!UBERON:0010364;5.29e-10;1!UBERON:0004288;5.29e-10;1!UBERON:0010313;2.40e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.84e-10,1;UBERON:0001343,2.84e-10,1;UBERON:0004910,2.84e-10,1;UBERON:0005154,2.84e-10,1;UBERON:0005295,2.84e-10,1;UBERON:0004813,2.84e-10,1;UBERON:0005297,2.84e-10,1;UBERON:0005294,2.84e-10,1;UBERON:0010141,2.84e-10,1;UBERON:0005891,2.84e-10,1;UBERON:0005705,8.24e-10,1;UBERON:0008193,8.24e-10,1;UBERON:0010912,8.24e-10,1;UBERON:0002514,8.24e-10,1;UBERON:0003457,8.24e-10,1;UBERON:0008907,8.24e-10,1;UBERON:0008001,8.24e-10,1;UBERON:0007213,8.24e-10,1;UBERON:0009891,8.24e-10,1;UBERON:0007914,8.24e-10,1;UBERON:0009292,8.24e-10,1;UBERON:0003099,8.24e-10,1;UBERON:0007375,8.24e-10,1;UBERON:0003323,8.24e-10,1;UBERON:0010258,8.24e-10,1;UBERON:0007842,8.24e-10,1;UBERON:0009494,8.24e-10,1;UBERON:0010042,8.24e-10,1;UBERON:0010045,8.24e-10,1;UBERON:0010259,8.24e-10,1;UBERON:0010359,8.24e-10,1;UBERON:0009526,8.24e-10,1;UBERON:0002397,8.24e-10,1;UBERON:0003113,8.24e-10,1;UBERON:0003277,8.24e-10,1;UBERON:0001709,8.24e-10,1;UBERON:0004066,8.24e-10,1;UBERON:0002244,8.24e-10,1;UBERON:0005620,8.24e-10,1;UBERON:0004362,8.24e-10,1;UBERON:0010364,8.24e-10,1;UBERON:0010046,8.24e-10,1;UBERON:0005868,8.24e-10,1;UBERON:0007238,8.24e-10,1;UBERON:0004288,8.24e-10,1;UBERON:0004068,8.24e-10,1;UBERON:0010334,8.24e-10,1;UBERON:0003852,8.24e-10,1;UBERON:0010253,8.24e-10,1;UBERON:0010313,3.59e-08,10;UBERON:0002342,3.59e-08,10;UBERON:0005062,3.59e-08,10;UBERON:0001474,3.37e-07,82|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,1.11957737119962,0,0.515151135268373,0.581592955118259,0,0.242584061187816,0.232429036905685,1.23350366406548,0,0.575384784644301,0.256160706529101,1.18241114944293,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.898893937780338,1.22433556948361,0,0.639337125799041,0,0,0,0.580418477257168,0,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0.949387162322653,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.43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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr3:158546800..158546806,+ | |||
|id=chr3:158546800..158546806,+ | |||
|ontology_enrichment_celltype=CL:0002009!8.54e-08!65;CL:0002194!1.47e-07!63;CL:0000576!1.47e-07!63;CL:0000040!1.47e-07!63;CL:0000559!1.47e-07!63;CL:0000839!5.65e-07!70;CL:0002320!6.91e-07!365;CL:0000763!8.23e-07!112;CL:0000049!8.23e-07!112;CL:0000557!8.26e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.29e-10;1!CL:0002625;5.29e-10;1!CL:0000216;5.29e-10;1!CL:0002591;5.29e-10;1!CL:0000235;5.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.84e-10,1;CL:0002625,2.84e-10,1;CL:0000216,2.84e-10,1;CL:0002591,6.91e-10,1;CL:0002194,2.75e-08,59;CL:0000576,2.75e-08,59;CL:0000040,2.75e-08,59;CL:0000559,2.75e-08,59;CL:0002009,5.49e-08,61;CL:0000839,2.58e-07,66;CL:0000557,3.43e-07,67;CL:0000235,5.75e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.29e-10;1!UBERON:0003852;5.29e-10;1 | |||
|ontology_enrichment_disease=DOID:2394!1.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.81e-13;3!DOID:127;8.81e-13;3!DOID:0060072;8.24e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.19e-13,3;DOID:127,5.19e-13,3;DOID:0060072,5.55e-10,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.29e-10;1!UBERON:0001343;5.29e-10;1!UBERON:0005705;5.29e-10;1!UBERON:0008193;5.29e-10;1!UBERON:0010912;5.29e-10;1!UBERON:0002514;5.29e-10;1!UBERON:0003457;5.29e-10;1!UBERON:0008907;5.29e-10;1!UBERON:0008001;5.29e-10;1!UBERON:0007213;5.29e-10;1!UBERON:0009891;5.29e-10;1!UBERON:0007914;5.29e-10;1!UBERON:0004910;5.29e-10;1!UBERON:0007375;5.29e-10;1!UBERON:0003323;5.29e-10;1!UBERON:0010258;5.29e-10;1!UBERON:0005253;5.29e-10;1!UBERON:0007842;5.29e-10;1!UBERON:0004813;5.29e-10;1!UBERON:0002397;5.29e-10;1!UBERON:0003113;5.29e-10;1!UBERON:0003277;5.29e-10;1!UBERON:0001709;5.29e-10;1!UBERON:0002244;5.29e-10;1!UBERON:0005620;5.29e-10;1!UBERON:0010364;5.29e-10;1!UBERON:0004288;5.29e-10;1!UBERON:0010313;2.40e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.84e-10,1;UBERON:0001343,2.84e-10,1;UBERON:0004910,2.84e-10,1;UBERON:0005154,2.84e-10,1;UBERON:0005295,2.84e-10,1;UBERON:0004813,2.84e-10,1;UBERON:0005297,2.84e-10,1;UBERON:0005294,2.84e-10,1;UBERON:0010141,2.84e-10,1;UBERON:0005891,2.84e-10,1;UBERON:0005705,8.24e-10,1;UBERON:0008193,8.24e-10,1;UBERON:0010912,8.24e-10,1;UBERON:0002514,8.24e-10,1;UBERON:0003457,8.24e-10,1;UBERON:0008907,8.24e-10,1;UBERON:0008001,8.24e-10,1;UBERON:0007213,8.24e-10,1;UBERON:0009891,8.24e-10,1;UBERON:0007914,8.24e-10,1;UBERON:0009292,8.24e-10,1;UBERON:0003099,8.24e-10,1;UBERON:0007375,8.24e-10,1;UBERON:0003323,8.24e-10,1;UBERON:0010258,8.24e-10,1;UBERON:0007842,8.24e-10,1;UBERON:0009494,8.24e-10,1;UBERON:0010042,8.24e-10,1;UBERON:0010045,8.24e-10,1;UBERON:0010259,8.24e-10,1;UBERON:0010359,8.24e-10,1;UBERON:0009526,8.24e-10,1;UBERON:0002397,8.24e-10,1;UBERON:0003113,8.24e-10,1;UBERON:0003277,8.24e-10,1;UBERON:0001709,8.24e-10,1;UBERON:0004066,8.24e-10,1;UBERON:0002244,8.24e-10,1;UBERON:0005620,8.24e-10,1;UBERON:0004362,8.24e-10,1;UBERON:0010364,8.24e-10,1;UBERON:0010046,8.24e-10,1;UBERON:0005868,8.24e-10,1;UBERON:0007238,8.24e-10,1;UBERON:0004288,8.24e-10,1;UBERON:0004068,8.24e-10,1;UBERON:0010334,8.24e-10,1;UBERON:0003852,8.24e-10,1;UBERON:0010253,8.24e-10,1;UBERON:0010313,3.59e-08,10;UBERON:0002342,3.59e-08,10;UBERON:0005062,3.59e-08,10;UBERON:0001474,3.37e-07,82 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,1.11957737119962,0,0.515151135268373,0.581592955118259,0,0.242584061187816,0.232429036905685,1.23350366406548,0,0.575384784644301,0.256160706529101,1.18241114944293,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.898893937780338,1.22433556948361,0,0.639337125799041,0,0,0,0.580418477257168,0,0.622822248995575,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0.949387162322653,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.600182192168805,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0.984868024349589,0,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,1.69954085009497,0,2.00902836572851,8.43335757932127,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,0.561320188866147,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,0,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.330569830721956,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.353437207037059,0,0,0,0,0.731140468893853,0,0.136499911407986,0.565621727814851,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0,1.29694662238543,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0.383010740264733,0.846694330895531,0.973865820823666,0.280797178113459,0,0.626719583092093,0,0.169291777801603,0.1605880751037,1.21079824314629,0,0.687010689511529,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0.281338832821026,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.113942055847001,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,1.62899880526114,0.864221491201268,2.28611152076586,0,0.082092520749339,0,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0.754703705257725,0,0.457680136793847,0.302461847526478,0,0,0.159296767163702,0,0.310525913752519,0.829412415681711,0.53168342911599,0.521745061811734,0.300515217994437,0.761610424337591,1.22061219961398,0.181848659202559,0,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0,0,0.231522474323834,0.489473409012935,0,0,0.657852148736121,0.530067437837643,0.771656153083659,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0.509197589862076,0,0.123935764259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| |||
|short_description=p@chr3:158546800..158546806,+ | |||
}} |
Revision as of 22:26, 12 September 2013
Short description: | p@chr3:158546800..158546806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:158546800..158546806, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.84e-10 | 1 |
seminiferous tubule epithelial cell | 2.84e-10 | 1 |
Sertoli cell | 2.84e-10 | 1 |
smooth muscle cell of the pulmonary artery | 6.91e-10 | 1 |
monopoietic cell | 2.75e-08 | 59 |
monocyte | 2.75e-08 | 59 |
monoblast | 2.75e-08 | 59 |
promonocyte | 2.75e-08 | 59 |
macrophage dendritic cell progenitor | 5.49e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.58e-07 | 66 |
granulocyte monocyte progenitor cell | 3.43e-07 | 67 |
macrophage | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.19e-13 | 3 |
leiomyoma | 5.19e-13 | 3 |
benign neoplasm | 5.55e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.