FFCP PHASE1:Hg19::chr3:159944452..159944480,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2659|description=CAGE_peak_at_chr3:159944452..159944480,-|id=chr3:159944452..159944480,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;2.96e-08;2!CL:0000242;2.96e-08;2|ontology_enrichment_celltype_v019_2=CL:0000242,2.42e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!5.16e-08!14|ontology_enrichment_disease_v019=DOID:8692;3.08e-09;31!DOID:1240;8.17e-07;39|ontology_enrichment_disease_v019_2=DOID:8692,3.12e-10,31;DOID:1240,9.96e-08,39|ontology_enrichment_uberon=UBERON:0001950!4.94e-23!20;UBERON:0002619!7.14e-23!22;UBERON:0007023!2.63e-20!115;UBERON:0000956!2.13e-19!25;UBERON:0000203!2.13e-19!25;UBERON:0001869!1.09e-18!32;UBERON:0001893!1.31e-18!34;UBERON:0002020!3.55e-18!34;UBERON:0003528!3.55e-18!34;UBERON:0002791!1.71e-17!33;UBERON:0000955!1.10e-16!69;UBERON:0006238!1.10e-16!69;UBERON:0003080!2.57e-16!42;UBERON:0002780!2.07e-15!41;UBERON:0001890!2.07e-15!41;UBERON:0006240!2.07e-15!41;UBERON:0001017!4.77e-15!82;UBERON:0001049!7.19e-15!57;UBERON:0005068!7.19e-15!57;UBERON:0006241!7.19e-15!57;UBERON:0007135!7.19e-15!57;UBERON:0005743!1.20e-14!86;UBERON:0002616!4.78e-14!59;UBERON:0000073!6.85e-14!94;UBERON:0001016!6.85e-14!94;UBERON:0003056!1.80e-10!61;UBERON:0003075!1.30e-09!86;UBERON:0007284!1.30e-09!86;UBERON:0000200!1.41e-09!6;UBERON:0001871!3.07e-09!7;UBERON:0002346!9.06e-09!90;UBERON:0001872!4.07e-08!5|ontology_enrichment_uberon_v019=UBERON:0002619;1.85e-52;22!UBERON:0001950;6.10e-52;20!UBERON:0000956;7.71e-46;25!UBERON:0000203;7.71e-46;25!UBERON:0001869;1.61e-34;32!UBERON:0001893;2.22e-31;34!UBERON:0002791;1.19e-30;32!UBERON:0003528;9.43e-29;34!UBERON:0002020;9.43e-29;34!UBERON:0000200;1.08e-21;6!UBERON:0002780;6.46e-21;41!UBERON:0001890;6.46e-21;41!UBERON:0001872;2.95e-18;5!UBERON:0001871;4.90e-18;6!UBERON:0000073;2.91e-13;53!UBERON:0002616;2.91e-13;53!UBERON:0001870;4.63e-12;3!UBERON:0000955;9.81e-10;68!UBERON:0002702;1.33e-08;2!UBERON:0001017;2.81e-08;75!UBERON:0002771;2.96e-08;2!UBERON:0001876;6.43e-08;2!UBERON:0001016;1.07e-07;83!UBERON:0002021;3.43e-07;5!UBERON:0000349;8.47e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.82e-52,22;UBERON:0001950,5.36e-52,20;UBERON:0000956,7.59e-46,25;UBERON:0000203,7.59e-46,25;UBERON:0001869,4.26e-39,32;UBERON:0001893,1.44e-36,34;UBERON:0002791,4.39e-35,32;UBERON:0003528,8.42e-33,34;UBERON:0002020,8.42e-33,34;UBERON:0002780,1.29e-29,41;UBERON:0001890,1.29e-29,41;UBERON:0003080,1.29e-29,41;UBERON:0006240,1.29e-29,41;UBERON:0000073,6.62e-22,53;UBERON:0002616,6.62e-22,53;UBERON:0000200,8.48e-22,6;UBERON:0001049,1.73e-20,56;UBERON:0005068,1.73e-20,56;UBERON:0006241,1.73e-20,56;UBERON:0007135,1.73e-20,56;UBERON:0000955,1.62e-19,68;UBERON:0006238,1.62e-19,68;UBERON:0003056,1.96e-18,61;UBERON:0001871,2.37e-18,6;UBERON:0001872,4.13e-18,5;UBERON:0001017,2.66e-17,81;UBERON:0001016,1.07e-16,89;UBERON:0003075,1.55e-12,82;UBERON:0007284,1.55e-12,82;UBERON:0001870,4.49e-12,3;UBERON:0002346,9.68e-12,86;UBERON:0010371,2.89e-11,104;UBERON:0007023,6.76e-10,114;UBERON:0002702,1.29e-08,2;UBERON:0002771,2.91e-08,2;UBERON:0001876,3.25e-08,2;UBERON:0011216,9.22e-08,223;UBERON:0004121,9.59e-08,171;UBERON:0000924,9.59e-08,171;UBERON:0006601,9.59e-08,171;UBERON:0002021,3.79e-07,5;UBERON:0000349,6.15e-07,5;UBERON:0010314,6.25e-07,132|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.5168606282089,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4691258584344,6.72610275577843,11.5888997301034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.45990461090791,0,0,0,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704387472105808,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.64341568457443,0,0,0.532685175939381,0.0821271560138091,0,0.116210378459959,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1178124023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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2659 | |||
|description=CAGE_peak_at_chr3:159944452..159944480,- | |||
|id=chr3:159944452..159944480,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.96e-08;2!CL:0000242;2.96e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.42e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.16e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.08e-09;31!DOID:1240;8.17e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.12e-10,31;DOID:1240,9.96e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001950!4.94e-23!20;UBERON:0002619!7.14e-23!22;UBERON:0007023!2.63e-20!115;UBERON:0000956!2.13e-19!25;UBERON:0000203!2.13e-19!25;UBERON:0001869!1.09e-18!32;UBERON:0001893!1.31e-18!34;UBERON:0002020!3.55e-18!34;UBERON:0003528!3.55e-18!34;UBERON:0002791!1.71e-17!33;UBERON:0000955!1.10e-16!69;UBERON:0006238!1.10e-16!69;UBERON:0003080!2.57e-16!42;UBERON:0002780!2.07e-15!41;UBERON:0001890!2.07e-15!41;UBERON:0006240!2.07e-15!41;UBERON:0001017!4.77e-15!82;UBERON:0001049!7.19e-15!57;UBERON:0005068!7.19e-15!57;UBERON:0006241!7.19e-15!57;UBERON:0007135!7.19e-15!57;UBERON:0005743!1.20e-14!86;UBERON:0002616!4.78e-14!59;UBERON:0000073!6.85e-14!94;UBERON:0001016!6.85e-14!94;UBERON:0003056!1.80e-10!61;UBERON:0003075!1.30e-09!86;UBERON:0007284!1.30e-09!86;UBERON:0000200!1.41e-09!6;UBERON:0001871!3.07e-09!7;UBERON:0002346!9.06e-09!90;UBERON:0001872!4.07e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.85e-52;22!UBERON:0001950;6.10e-52;20!UBERON:0000956;7.71e-46;25!UBERON:0000203;7.71e-46;25!UBERON:0001869;1.61e-34;32!UBERON:0001893;2.22e-31;34!UBERON:0002791;1.19e-30;32!UBERON:0003528;9.43e-29;34!UBERON:0002020;9.43e-29;34!UBERON:0000200;1.08e-21;6!UBERON:0002780;6.46e-21;41!UBERON:0001890;6.46e-21;41!UBERON:0001872;2.95e-18;5!UBERON:0001871;4.90e-18;6!UBERON:0000073;2.91e-13;53!UBERON:0002616;2.91e-13;53!UBERON:0001870;4.63e-12;3!UBERON:0000955;9.81e-10;68!UBERON:0002702;1.33e-08;2!UBERON:0001017;2.81e-08;75!UBERON:0002771;2.96e-08;2!UBERON:0001876;6.43e-08;2!UBERON:0001016;1.07e-07;83!UBERON:0002021;3.43e-07;5!UBERON:0000349;8.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.82e-52,22;UBERON:0001950,5.36e-52,20;UBERON:0000956,7.59e-46,25;UBERON:0000203,7.59e-46,25;UBERON:0001869,4.26e-39,32;UBERON:0001893,1.44e-36,34;UBERON:0002791,4.39e-35,32;UBERON:0003528,8.42e-33,34;UBERON:0002020,8.42e-33,34;UBERON:0002780,1.29e-29,41;UBERON:0001890,1.29e-29,41;UBERON:0003080,1.29e-29,41;UBERON:0006240,1.29e-29,41;UBERON:0000073,6.62e-22,53;UBERON:0002616,6.62e-22,53;UBERON:0000200,8.48e-22,6;UBERON:0001049,1.73e-20,56;UBERON:0005068,1.73e-20,56;UBERON:0006241,1.73e-20,56;UBERON:0007135,1.73e-20,56;UBERON:0000955,1.62e-19,68;UBERON:0006238,1.62e-19,68;UBERON:0003056,1.96e-18,61;UBERON:0001871,2.37e-18,6;UBERON:0001872,4.13e-18,5;UBERON:0001017,2.66e-17,81;UBERON:0001016,1.07e-16,89;UBERON:0003075,1.55e-12,82;UBERON:0007284,1.55e-12,82;UBERON:0001870,4.49e-12,3;UBERON:0002346,9.68e-12,86;UBERON:0010371,2.89e-11,104;UBERON:0007023,6.76e-10,114;UBERON:0002702,1.29e-08,2;UBERON:0002771,2.91e-08,2;UBERON:0001876,3.25e-08,2;UBERON:0011216,9.22e-08,223;UBERON:0004121,9.59e-08,171;UBERON:0000924,9.59e-08,171;UBERON:0006601,9.59e-08,171;UBERON:0002021,3.79e-07,5;UBERON:0000349,6.15e-07,5;UBERON:0010314,6.25e-07,132 | |||
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|short_description=p@chr3:159944452..159944480,- | |||
}} |
Revision as of 22:28, 12 September 2013
Short description: | p@chr3:159944452..159944480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:159944452..159944480, - |
Coexpression cluster: | C2659_acute_CD133_CD34_ovary_chronic_lung_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.42e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.12e-10 | 31 |
leukemia | 9.96e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.