FFCP PHASE1:Mm9::chr12:28022440..28022451,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=100|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:28022440..28022451,-|id=chr12:28022440..28022451,-|ontology_enrichment_celltype=CL:0000540!3.15e-12!33;CL:0000047!3.15e-12!33;CL:0000031!3.15e-12!33;CL:0000404!3.15e-12!33;CL:0000117!4.31e-12!23;CL:0000337!4.31e-12!23;CL:0002609!3.42e-10!6;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0002319!4.74e-08!43;CL:0000221!9.61e-08!44;CL:0000133!9.61e-08!44|ontology_enrichment_celltype_v019_2=CL:0002609,8.37e-49,6;CL:0000117,4.63e-34,23;CL:0000337,4.63e-34,23;CL:0000540,1.34e-28,33;CL:0000047,1.34e-28,33;CL:0000031,1.34e-28,33;CL:0000404,1.34e-28,33;CL:0002608,5.39e-25,3;CL:0000393,4.06e-24,39;CL:0000211,4.06e-24,39;CL:0002319,8.03e-22,43;CL:0000221,2.59e-21,44;CL:0000133,2.59e-21,44;CL:0002321,3.75e-13,70;CL:0002613,2.51e-11,3;CL:0000120,3.20e-11,3;CL:0000723,6.08e-10,91;CL:0000048,6.08e-10,91;CL:0000034,2.81e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.24e-17,29;UBERON:0002791,2.24e-17,29;UBERON:0001893,2.24e-17,29;UBERON:0002020,9.36e-15,34;UBERON:0000956,6.44e-14,21;UBERON:0001869,6.44e-14,21;UBERON:0000203,6.44e-14,21;UBERON:0002780,8.42e-13,39;UBERON:0001890,8.42e-13,39;UBERON:0006240,8.42e-13,39;UBERON:0001017,1.39e-12,73;UBERON:0003080,1.81e-12,40;UBERON:0001016,3.15e-12,75;UBERON:0001954,4.25e-11,7;UBERON:0003022,4.25e-11,7;UBERON:0002421,4.25e-11,7;UBERON:0000349,4.25e-11,7;UBERON:0002600,4.25e-11,7;UBERON:0002616,8.97e-11,46;UBERON:0000955,1.56e-10,47;UBERON:0006238,1.56e-10,47;UBERON:0003056,4.43e-10,49;UBERON:0002346,1.30e-09,64;UBERON:0003075,1.30e-09,64;UBERON:0007284,1.30e-09,64;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0001049,1.82e-09,52;UBERON:0005068,1.82e-09,52;UBERON:0006241,1.82e-09,52;UBERON:0007135,1.82e-09,52;UBERON:0000073,4.29e-09,54;UBERON:0010371,2.44e-08,73;UBERON:0000369,3.73e-07,5;UBERON:0002435,3.73e-07,5;UBERON:0000204,3.73e-07,5;UBERON:0010082,3.73e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,2.07379224616955,3.64516033495565,3.36519938162211,0.285650984403804,0,2.20483438586917,2.87536413054709,1.83843757322004,0,0,0.153606533256243,1.05509030184155,1.28082701043374,0.52091337055676,0,0,0,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0,0,0.272145996605311,0,0,0,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,1.29254038639679,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr12:28022440..28022451,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=100 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:28022440..28022451,- | |||
|id=chr12:28022440..28022451,- | |||
|ontology_enrichment_celltype=CL:0000540!3.15e-12!33;CL:0000047!3.15e-12!33;CL:0000031!3.15e-12!33;CL:0000404!3.15e-12!33;CL:0000117!4.31e-12!23;CL:0000337!4.31e-12!23;CL:0002609!3.42e-10!6;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0002319!4.74e-08!43;CL:0000221!9.61e-08!44;CL:0000133!9.61e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.37e-49,6;CL:0000117,4.63e-34,23;CL:0000337,4.63e-34,23;CL:0000540,1.34e-28,33;CL:0000047,1.34e-28,33;CL:0000031,1.34e-28,33;CL:0000404,1.34e-28,33;CL:0002608,5.39e-25,3;CL:0000393,4.06e-24,39;CL:0000211,4.06e-24,39;CL:0002319,8.03e-22,43;CL:0000221,2.59e-21,44;CL:0000133,2.59e-21,44;CL:0002321,3.75e-13,70;CL:0002613,2.51e-11,3;CL:0000120,3.20e-11,3;CL:0000723,6.08e-10,91;CL:0000048,6.08e-10,91;CL:0000034,2.81e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.24e-17,29;UBERON:0002791,2.24e-17,29;UBERON:0001893,2.24e-17,29;UBERON:0002020,9.36e-15,34;UBERON:0000956,6.44e-14,21;UBERON:0001869,6.44e-14,21;UBERON:0000203,6.44e-14,21;UBERON:0002780,8.42e-13,39;UBERON:0001890,8.42e-13,39;UBERON:0006240,8.42e-13,39;UBERON:0001017,1.39e-12,73;UBERON:0003080,1.81e-12,40;UBERON:0001016,3.15e-12,75;UBERON:0001954,4.25e-11,7;UBERON:0003022,4.25e-11,7;UBERON:0002421,4.25e-11,7;UBERON:0000349,4.25e-11,7;UBERON:0002600,4.25e-11,7;UBERON:0002616,8.97e-11,46;UBERON:0000955,1.56e-10,47;UBERON:0006238,1.56e-10,47;UBERON:0003056,4.43e-10,49;UBERON:0002346,1.30e-09,64;UBERON:0003075,1.30e-09,64;UBERON:0007284,1.30e-09,64;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0001049,1.82e-09,52;UBERON:0005068,1.82e-09,52;UBERON:0006241,1.82e-09,52;UBERON:0007135,1.82e-09,52;UBERON:0000073,4.29e-09,54;UBERON:0010371,2.44e-08,73;UBERON:0000369,3.73e-07,5;UBERON:0002435,3.73e-07,5;UBERON:0000204,3.73e-07,5;UBERON:0010082,3.73e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,2.07379224616955,3.64516033495565,3.36519938162211,0.285650984403804,0,2.20483438586917,2.87536413054709,1.83843757322004,0,0,0.153606533256243,1.05509030184155,1.28082701043374,0.52091337055676,0,0,0,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0,0,0.272145996605311,0,0,0,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,1.29254038639679,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr12:28022440..28022451,- | |||
}} |
Revision as of 22:39, 12 September 2013
Short description: | p@chr12:28022440..28022451, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28022440..28022451, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.37e-49 | 6 |
CNS neuron (sensu Vertebrata) | 4.63e-34 | 23 |
neuroblast (sensu Vertebrata) | 4.63e-34 | 23 |
neuron | 1.34e-28 | 33 |
neuronal stem cell | 1.34e-28 | 33 |
neuroblast | 1.34e-28 | 33 |
electrically signaling cell | 1.34e-28 | 33 |
hippocampal neuron | 5.39e-25 | 3 |
electrically responsive cell | 4.06e-24 | 39 |
electrically active cell | 4.06e-24 | 39 |
neural cell | 8.03e-22 | 43 |
ectodermal cell | 2.59e-21 | 44 |
neurectodermal cell | 2.59e-21 | 44 |
embryonic cell | 3.75e-13 | 70 |
striatum neuron | 2.51e-11 | 3 |
granule cell | 3.20e-11 | 3 |
somatic stem cell | 6.08e-10 | 91 |
multi fate stem cell | 6.08e-10 | 91 |
stem cell | 2.81e-09 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.