FFCP PHASE1:Mm9::chr12:62624876..62624909,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=238205|HGNC=|MCL_coexpression_id=1|UniProt=Q8BXA0|association_with_transcript=-25bp_to_ENSMUST00000055815,ENSMUST00000119481_5end|description=CAGE_peak_6_at_Lrfn5_5end|id=chr12:62624876..62624909,+|ontology_enrichment_celltype=CL:0000117!4.56e-18!23;CL:0000337!4.56e-18!23;CL:0000540!6.03e-11!33;CL:0000047!6.03e-11!33;CL:0000031!6.03e-11!33;CL:0000404!6.03e-11!33;CL:0000393!6.48e-08!39;CL:0000211!6.48e-08!39;CL:0000221!4.17e-07!44;CL:0000133!4.17e-07!44;CL:0002319!6.12e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-26,23;CL:0000337,1.24e-26,23;CL:0000540,9.51e-19,33;CL:0000047,9.51e-19,33;CL:0000031,9.51e-19,33;CL:0000404,9.51e-19,33;CL:0000393,5.23e-15,39;CL:0000211,5.23e-15,39;CL:0002319,4.20e-13,43;CL:0000221,1.11e-12,44;CL:0000133,1.11e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.81e-25!63;UBERON:0002020!8.62e-25!34;UBERON:0001049!1.30e-24!52;UBERON:0005068!1.30e-24!52;UBERON:0006241!1.30e-24!52;UBERON:0007135!1.30e-24!52;UBERON:0000955!8.34e-23!50;UBERON:0006238!8.34e-23!50;UBERON:0002616!4.13e-22!49;UBERON:0001017!2.27e-21!73;UBERON:0005743!2.27e-21!73;UBERON:0000073!5.03e-21!75;UBERON:0001016!5.03e-21!75;UBERON:0003056!6.14e-21!49;UBERON:0002346!1.03e-20!71;UBERON:0003075!1.03e-20!71;UBERON:0007284!1.03e-20!71;UBERON:0002791!1.81e-20!29;UBERON:0003528!1.81e-20!29;UBERON:0001893!1.81e-20!29;UBERON:0003080!2.96e-19!40;UBERON:0004121!3.03e-19!102;UBERON:0000924!3.03e-19!102;UBERON:0006601!3.03e-19!102;UBERON:0002780!2.01e-18!39;UBERON:0001890!2.01e-18!39;UBERON:0006240!2.01e-18!39;UBERON:0000956!5.68e-15!21;UBERON:0001869!5.68e-15!21;UBERON:0000203!5.68e-15!21;UBERON:0007811!2.74e-13!86;UBERON:0000153!1.78e-12!94;UBERON:0002619!1.67e-11!17;UBERON:0002021!1.03e-10!10;UBERON:0000411!1.03e-10!10;UBERON:0001950!1.03e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.90e-38,34;UBERON:0000073,5.55e-38,54;UBERON:0001049,9.20e-35,52;UBERON:0005068,9.20e-35,52;UBERON:0006241,9.20e-35,52;UBERON:0007135,9.20e-35,52;UBERON:0001017,2.91e-34,73;UBERON:0001016,4.47e-33,75;UBERON:0003528,3.33e-30,29;UBERON:0002791,3.33e-30,29;UBERON:0001893,3.33e-30,29;UBERON:0002346,2.43e-28,64;UBERON:0003075,2.43e-28,64;UBERON:0007284,2.43e-28,64;UBERON:0000955,3.11e-27,47;UBERON:0006238,3.11e-27,47;UBERON:0003080,1.03e-26,40;UBERON:0002616,5.09e-26,46;UBERON:0004121,1.97e-25,95;UBERON:0000924,1.97e-25,95;UBERON:0006601,1.97e-25,95;UBERON:0010371,3.01e-25,73;UBERON:0002780,3.26e-25,39;UBERON:0001890,3.26e-25,39;UBERON:0006240,3.26e-25,39;UBERON:0000956,3.54e-24,21;UBERON:0001869,3.54e-24,21;UBERON:0000203,3.54e-24,21;UBERON:0003056,3.16e-22,49;UBERON:0002021,1.11e-19,10;UBERON:0000411,1.11e-19,10;UBERON:0001950,1.11e-19,10;UBERON:0010314,4.29e-18,92;UBERON:0002619,1.62e-17,17;UBERON:0000025,5.48e-11,114;UBERON:0002240,1.21e-10,6;UBERON:0005174,1.21e-10,6;UBERON:0001137,1.21e-10,6;UBERON:0004111,1.68e-10,122;UBERON:0001948,1.99e-09,5;UBERON:0002315,1.99e-09,5;UBERON:0003076,3.11e-08,12;UBERON:0003057,3.11e-08,12;UBERON:0002420,3.23e-07,8;UBERON:0007245,3.23e-07,8;UBERON:0010009,3.23e-07,8;UBERON:0010011,3.23e-07,8;UBERON:0000454,3.23e-07,8;UBERON:0002950,3.93e-07,4;UBERON:0001891,3.93e-07,4;UBERON:0009616,3.93e-07,4;UBERON:0010286,3.93e-07,4|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,3.83651565541367,2.43010688997043,3.99617426567626,1.42825492201902,2.65042249141936,1.95985278743926,0.958454710182364,0.919218786610021,2.20231761998777,2.93680877595932,2.30409799884365,2.2420668914133,2.8361169516747,1.56274011167028,1.11673199600552,2.25105044012672,1.98637722109853,3.24091444021034,4.12877874317399,3.35519002485541,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,2.99581278809645,0.915001205637253,0.753926112677186,5.04090528557602,5.62574006126727,2.49345653471472,4.05603157669394,0,0,0,0.420883711772948,0,0,0.360124259610698,0.753524089178575,0.544291993210623,0.384341160854549,0.562210347358373,1.55222022443409,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.9551876352064,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,1.12385412991454,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340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| ||
|EntrezGene=238205 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BXA0 | |||
|association_with_transcript=-25bp_to_ENSMUST00000055815,ENSMUST00000119481_5end | |||
|description=CAGE_peak_6_at_Lrfn5_5end | |||
|id=chr12:62624876..62624909,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.56e-18!23;CL:0000337!4.56e-18!23;CL:0000540!6.03e-11!33;CL:0000047!6.03e-11!33;CL:0000031!6.03e-11!33;CL:0000404!6.03e-11!33;CL:0000393!6.48e-08!39;CL:0000211!6.48e-08!39;CL:0000221!4.17e-07!44;CL:0000133!4.17e-07!44;CL:0002319!6.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-26,23;CL:0000337,1.24e-26,23;CL:0000540,9.51e-19,33;CL:0000047,9.51e-19,33;CL:0000031,9.51e-19,33;CL:0000404,9.51e-19,33;CL:0000393,5.23e-15,39;CL:0000211,5.23e-15,39;CL:0002319,4.20e-13,43;CL:0000221,1.11e-12,44;CL:0000133,1.11e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.81e-25!63;UBERON:0002020!8.62e-25!34;UBERON:0001049!1.30e-24!52;UBERON:0005068!1.30e-24!52;UBERON:0006241!1.30e-24!52;UBERON:0007135!1.30e-24!52;UBERON:0000955!8.34e-23!50;UBERON:0006238!8.34e-23!50;UBERON:0002616!4.13e-22!49;UBERON:0001017!2.27e-21!73;UBERON:0005743!2.27e-21!73;UBERON:0000073!5.03e-21!75;UBERON:0001016!5.03e-21!75;UBERON:0003056!6.14e-21!49;UBERON:0002346!1.03e-20!71;UBERON:0003075!1.03e-20!71;UBERON:0007284!1.03e-20!71;UBERON:0002791!1.81e-20!29;UBERON:0003528!1.81e-20!29;UBERON:0001893!1.81e-20!29;UBERON:0003080!2.96e-19!40;UBERON:0004121!3.03e-19!102;UBERON:0000924!3.03e-19!102;UBERON:0006601!3.03e-19!102;UBERON:0002780!2.01e-18!39;UBERON:0001890!2.01e-18!39;UBERON:0006240!2.01e-18!39;UBERON:0000956!5.68e-15!21;UBERON:0001869!5.68e-15!21;UBERON:0000203!5.68e-15!21;UBERON:0007811!2.74e-13!86;UBERON:0000153!1.78e-12!94;UBERON:0002619!1.67e-11!17;UBERON:0002021!1.03e-10!10;UBERON:0000411!1.03e-10!10;UBERON:0001950!1.03e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.90e-38,34;UBERON:0000073,5.55e-38,54;UBERON:0001049,9.20e-35,52;UBERON:0005068,9.20e-35,52;UBERON:0006241,9.20e-35,52;UBERON:0007135,9.20e-35,52;UBERON:0001017,2.91e-34,73;UBERON:0001016,4.47e-33,75;UBERON:0003528,3.33e-30,29;UBERON:0002791,3.33e-30,29;UBERON:0001893,3.33e-30,29;UBERON:0002346,2.43e-28,64;UBERON:0003075,2.43e-28,64;UBERON:0007284,2.43e-28,64;UBERON:0000955,3.11e-27,47;UBERON:0006238,3.11e-27,47;UBERON:0003080,1.03e-26,40;UBERON:0002616,5.09e-26,46;UBERON:0004121,1.97e-25,95;UBERON:0000924,1.97e-25,95;UBERON:0006601,1.97e-25,95;UBERON:0010371,3.01e-25,73;UBERON:0002780,3.26e-25,39;UBERON:0001890,3.26e-25,39;UBERON:0006240,3.26e-25,39;UBERON:0000956,3.54e-24,21;UBERON:0001869,3.54e-24,21;UBERON:0000203,3.54e-24,21;UBERON:0003056,3.16e-22,49;UBERON:0002021,1.11e-19,10;UBERON:0000411,1.11e-19,10;UBERON:0001950,1.11e-19,10;UBERON:0010314,4.29e-18,92;UBERON:0002619,1.62e-17,17;UBERON:0000025,5.48e-11,114;UBERON:0002240,1.21e-10,6;UBERON:0005174,1.21e-10,6;UBERON:0001137,1.21e-10,6;UBERON:0004111,1.68e-10,122;UBERON:0001948,1.99e-09,5;UBERON:0002315,1.99e-09,5;UBERON:0003076,3.11e-08,12;UBERON:0003057,3.11e-08,12;UBERON:0002420,3.23e-07,8;UBERON:0007245,3.23e-07,8;UBERON:0010009,3.23e-07,8;UBERON:0010011,3.23e-07,8;UBERON:0000454,3.23e-07,8;UBERON:0002950,3.93e-07,4;UBERON:0001891,3.93e-07,4;UBERON:0009616,3.93e-07,4;UBERON:0010286,3.93e-07,4 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,3.83651565541367,2.43010688997043,3.99617426567626,1.42825492201902,2.65042249141936,1.95985278743926,0.958454710182364,0.919218786610021,2.20231761998777,2.93680877595932,2.30409799884365,2.2420668914133,2.8361169516747,1.56274011167028,1.11673199600552,2.25105044012672,1.98637722109853,3.24091444021034,4.12877874317399,3.35519002485541,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,2.99581278809645,0.915001205637253,0.753926112677186,5.04090528557602,5.62574006126727,2.49345653471472,4.05603157669394,0,0,0,0.420883711772948,0,0,0.360124259610698,0.753524089178575,0.544291993210623,0.384341160854549,0.562210347358373,1.55222022443409,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.9551876352064,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,1.12385412991454,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.58678619322877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.64751842617067,5.52390283808612,4.58316410751517,3.43706364687375,5.48066015816514,3.7769694869485,3.37511250115903,8.55610286126019,4.98456649882625,4.65984280576638,0,0.798049746802062,0.512200817262403,0.486213434136588,0.419226325255965,0.735374033800057,0.44449345560323,1.03017528619447,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,0.936415074698824,0.89635213366817,0.746661096422973,2.38146845641537,0.231768651889711,0.77163688185482,0.412085900803307,0.735994600671987,0.342869252385415,1.06485483695602,0.238436189947321,1.0174249164263,0.941093804153306,0.846146078916765,0.548783918618318,1.31534855718921,0.271608227691724,1.12228454331548,1.18635018124174,0.788035859004508,0,1.08455788830176,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0.463735671240843 | |||
|short_description=p6@Lrfn5 | |||
}} |
Revision as of 23:01, 12 September 2013
Short description: | p6@Lrfn5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lrfn5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -25bp_to_ENSMUST00000055815, ENSMUST00000119481_5end |
EntrezGene: | Lrfn5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-26 | 23 |
neuron | 9.51e-19 | 33 |
neuronal stem cell | 9.51e-19 | 33 |
neuroblast | 9.51e-19 | 33 |
electrically signaling cell | 9.51e-19 | 33 |
electrically responsive cell | 5.23e-15 | 39 |
electrically active cell | 5.23e-15 | 39 |
neural cell | 4.20e-13 | 43 |
ectodermal cell | 1.11e-12 | 44 |
neurectodermal cell | 1.11e-12 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.