FFCP PHASE1:Mm9::chr15:80003635..80003659,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17309|HGNC=|MCL_coexpression_id=1|UniProt=Q5RKT9|association_with_transcript=-491bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end|description=CAGE_peak_7_at_Mgat3_5end|id=chr15:80003635..80003659,+|ontology_enrichment_celltype=CL:0000540!1.58e-11!33;CL:0000047!1.58e-11!33;CL:0000031!1.58e-11!33;CL:0000404!1.58e-11!33;CL:0000117!2.04e-10!23;CL:0000337!2.04e-10!23;CL:0000221!1.71e-09!44;CL:0000133!1.71e-09!44;CL:0002319!4.46e-09!43;CL:0000393!5.42e-09!39;CL:0000211!5.42e-09!39;CL:0000055!6.55e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-18,23;CL:0000337,2.00e-18,23;CL:0000540,3.75e-15,33;CL:0000047,3.75e-15,33;CL:0000031,3.75e-15,33;CL:0000404,3.75e-15,33;CL:0000221,4.76e-12,44;CL:0000133,4.76e-12,44;CL:0000393,7.14e-12,39;CL:0000211,7.14e-12,39;CL:0002319,2.63e-11,43;CL:0002321,1.79e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.36e-23!73;UBERON:0005743!8.36e-23!73;UBERON:0000073!1.02e-22!75;UBERON:0001016!1.02e-22!75;UBERON:0004121!1.84e-18!102;UBERON:0000924!1.84e-18!102;UBERON:0006601!1.84e-18!102;UBERON:0001049!6.20e-18!52;UBERON:0005068!6.20e-18!52;UBERON:0006241!6.20e-18!52;UBERON:0007135!6.20e-18!52;UBERON:0002346!3.50e-17!71;UBERON:0003075!3.50e-17!71;UBERON:0007284!3.50e-17!71;UBERON:0002020!9.26e-17!34;UBERON:0000033!1.30e-15!63;UBERON:0000955!5.07e-15!50;UBERON:0006238!5.07e-15!50;UBERON:0002616!1.97e-14!49;UBERON:0003056!9.15e-14!49;UBERON:0003080!2.66e-13!40;UBERON:0002791!2.67e-13!29;UBERON:0003528!2.67e-13!29;UBERON:0001893!2.67e-13!29;UBERON:0002780!8.44e-13!39;UBERON:0001890!8.44e-13!39;UBERON:0006240!8.44e-13!39;UBERON:0007811!4.50e-11!86;UBERON:0000956!2.50e-10!21;UBERON:0001869!2.50e-10!21;UBERON:0000203!2.50e-10!21;UBERON:0000153!8.98e-10!94;UBERON:0002619!1.73e-08!17;UBERON:0002021!3.19e-08!10;UBERON:0000411!3.19e-08!10;UBERON:0001950!3.19e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.74e-35,73;UBERON:0001016,9.30e-34,75;UBERON:0000073,6.12e-33,54;UBERON:0001049,1.68e-32,52;UBERON:0005068,1.68e-32,52;UBERON:0006241,1.68e-32,52;UBERON:0007135,1.68e-32,52;UBERON:0002020,1.96e-32,34;UBERON:0002346,3.47e-27,64;UBERON:0003075,3.47e-27,64;UBERON:0007284,3.47e-27,64;UBERON:0004121,2.27e-26,95;UBERON:0000924,2.27e-26,95;UBERON:0006601,2.27e-26,95;UBERON:0000955,7.67e-26,47;UBERON:0006238,7.67e-26,47;UBERON:0003528,3.01e-25,29;UBERON:0002791,3.01e-25,29;UBERON:0001893,3.01e-25,29;UBERON:0002616,1.19e-24,46;UBERON:0010371,9.33e-24,73;UBERON:0003080,1.39e-21,40;UBERON:0002780,1.37e-20,39;UBERON:0001890,1.37e-20,39;UBERON:0006240,1.37e-20,39;UBERON:0000956,3.49e-18,21;UBERON:0001869,3.49e-18,21;UBERON:0000203,3.49e-18,21;UBERON:0003056,2.17e-17,49;UBERON:0010314,1.93e-16,92;UBERON:0002619,6.76e-16,17;UBERON:0002021,2.08e-15,10;UBERON:0000411,2.08e-15,10;UBERON:0001950,2.08e-15,10;UBERON:0003076,1.92e-11,12;UBERON:0003057,1.92e-11,12;UBERON:0011216,8.18e-10,194;UBERON:0004111,9.51e-10,122;UBERON:0000025,1.30e-09,114;UBERON:0002240,1.45e-09,6;UBERON:0005174,1.45e-09,6;UBERON:0001137,1.45e-09,6;UBERON:0001948,1.62e-08,5;UBERON:0002315,1.62e-08,5;UBERON:0002420,3.93e-08,8;UBERON:0007245,3.93e-08,8;UBERON:0010009,3.93e-08,8;UBERON:0010011,3.93e-08,8;UBERON:0000454,3.93e-08,8;UBERON:0000369,1.97e-07,5;UBERON:0002435,1.97e-07,5;UBERON:0000204,1.97e-07,5;UBERON:0010082,1.97e-07,5|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.02316460859598,1.05798195854407,3.1691570175309,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,2.02508907497536,1.68259969081106,3.71346279724945,5.30084498283872,1.34739879136449,0.862609239164127,4.5960939330501,0,2.93680877595932,2.15049146558741,2.50583946687368,1.73826522844578,3.12548022334056,2.51264699101243,0,1.68078072554491,5.30331453852602,3.98640706237488,5.59198337475902,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.54927761754349,0,0,0,3.24736561516821,1.26679932737549,2.52762222507392,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,1.75668478206928,2.09446706813455,0,0,0,0,1.9472783122627,4.11750542536764,2.89005009859588,5.38855392596057,3.83573185995496,2.70124457927428,7.78758062725237,0.305518091550949,0.248813941220186,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,0.340182495756639,0.512454881139399,0.468508622798644,1.29351685369508,0,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,5.46753866266731,2.26390147234426,0.330418782983798,0,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.889512175379481,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0.189491411770485,0.651859905768103,0,0.704070744865506,0.167506257441816,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.318909537314974,0.491589944147214,0,0.433947175744535,0,0,0,0,2.88991061978026,7.14991288212439,0,0.504941854408746,0,0.780877488593277,1.29254038639679,0.477937595905104,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0,0.534196811001766,0.162886959353576,0.329940245945071,0,1.45668381692989,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.646793418913773,0,0.532020700926821,0.178368817602071,0.658196082408484,0,2.11204537257339,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,2.22510362412612,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,0.86404272657441,1.04544148007234,1.09181281873089,0.539457385539283,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0,0.496375471371293,0.777804753376191,0.258319646955462,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0,0.596044064343795,0.480781798079875,0.295379054349154,0.605798699688886,0.228620419965,0.201652370273681,0.682205165178267,0.384847366561318,0.233753804363138,0.453460767230423,0,0,0,2.70465431645067,1.31377732815827,0.183151624267265,0,0,7.34177395402186,4.60325236507177,4.01026859407578,7.73339320546594,2.74033007908257,2.2661816921691,6.07520250208625,4.5032120322422,4.07828168085784,5.69536342927002,0.103787347584177,0,0.170733605754134,0.729320151204882,1.04806581313991,0.735374033800057,0,0.412070114477788,0,0.758091635291392,0.760437899670719,1.32038438970253,0.655490552289177,0.320125762024346,0.402048282689293,0.952587382566147,0.231768651889711,0.192909220463705,0.824171801606613,0.735994600671987,0.342869252385415,1.06485483695602,0.238436189947321,0.726732083161643,0.564656282491984,0.25384382367503,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.29551344712669,1.63692417267876,1.54936841185966,0.192906610981141,1.49886346762768,0.701794825336225,0.429742108096597,0,0.441182838239031,1.15933917810211|short_description=p7@Mgat3}} | ||
|EntrezGene=17309 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q5RKT9 | |||
|association_with_transcript=-491bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end | |||
|description=CAGE_peak_7_at_Mgat3_5end | |||
|id=chr15:80003635..80003659,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.58e-11!33;CL:0000047!1.58e-11!33;CL:0000031!1.58e-11!33;CL:0000404!1.58e-11!33;CL:0000117!2.04e-10!23;CL:0000337!2.04e-10!23;CL:0000221!1.71e-09!44;CL:0000133!1.71e-09!44;CL:0002319!4.46e-09!43;CL:0000393!5.42e-09!39;CL:0000211!5.42e-09!39;CL:0000055!6.55e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-18,23;CL:0000337,2.00e-18,23;CL:0000540,3.75e-15,33;CL:0000047,3.75e-15,33;CL:0000031,3.75e-15,33;CL:0000404,3.75e-15,33;CL:0000221,4.76e-12,44;CL:0000133,4.76e-12,44;CL:0000393,7.14e-12,39;CL:0000211,7.14e-12,39;CL:0002319,2.63e-11,43;CL:0002321,1.79e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.36e-23!73;UBERON:0005743!8.36e-23!73;UBERON:0000073!1.02e-22!75;UBERON:0001016!1.02e-22!75;UBERON:0004121!1.84e-18!102;UBERON:0000924!1.84e-18!102;UBERON:0006601!1.84e-18!102;UBERON:0001049!6.20e-18!52;UBERON:0005068!6.20e-18!52;UBERON:0006241!6.20e-18!52;UBERON:0007135!6.20e-18!52;UBERON:0002346!3.50e-17!71;UBERON:0003075!3.50e-17!71;UBERON:0007284!3.50e-17!71;UBERON:0002020!9.26e-17!34;UBERON:0000033!1.30e-15!63;UBERON:0000955!5.07e-15!50;UBERON:0006238!5.07e-15!50;UBERON:0002616!1.97e-14!49;UBERON:0003056!9.15e-14!49;UBERON:0003080!2.66e-13!40;UBERON:0002791!2.67e-13!29;UBERON:0003528!2.67e-13!29;UBERON:0001893!2.67e-13!29;UBERON:0002780!8.44e-13!39;UBERON:0001890!8.44e-13!39;UBERON:0006240!8.44e-13!39;UBERON:0007811!4.50e-11!86;UBERON:0000956!2.50e-10!21;UBERON:0001869!2.50e-10!21;UBERON:0000203!2.50e-10!21;UBERON:0000153!8.98e-10!94;UBERON:0002619!1.73e-08!17;UBERON:0002021!3.19e-08!10;UBERON:0000411!3.19e-08!10;UBERON:0001950!3.19e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.74e-35,73;UBERON:0001016,9.30e-34,75;UBERON:0000073,6.12e-33,54;UBERON:0001049,1.68e-32,52;UBERON:0005068,1.68e-32,52;UBERON:0006241,1.68e-32,52;UBERON:0007135,1.68e-32,52;UBERON:0002020,1.96e-32,34;UBERON:0002346,3.47e-27,64;UBERON:0003075,3.47e-27,64;UBERON:0007284,3.47e-27,64;UBERON:0004121,2.27e-26,95;UBERON:0000924,2.27e-26,95;UBERON:0006601,2.27e-26,95;UBERON:0000955,7.67e-26,47;UBERON:0006238,7.67e-26,47;UBERON:0003528,3.01e-25,29;UBERON:0002791,3.01e-25,29;UBERON:0001893,3.01e-25,29;UBERON:0002616,1.19e-24,46;UBERON:0010371,9.33e-24,73;UBERON:0003080,1.39e-21,40;UBERON:0002780,1.37e-20,39;UBERON:0001890,1.37e-20,39;UBERON:0006240,1.37e-20,39;UBERON:0000956,3.49e-18,21;UBERON:0001869,3.49e-18,21;UBERON:0000203,3.49e-18,21;UBERON:0003056,2.17e-17,49;UBERON:0010314,1.93e-16,92;UBERON:0002619,6.76e-16,17;UBERON:0002021,2.08e-15,10;UBERON:0000411,2.08e-15,10;UBERON:0001950,2.08e-15,10;UBERON:0003076,1.92e-11,12;UBERON:0003057,1.92e-11,12;UBERON:0011216,8.18e-10,194;UBERON:0004111,9.51e-10,122;UBERON:0000025,1.30e-09,114;UBERON:0002240,1.45e-09,6;UBERON:0005174,1.45e-09,6;UBERON:0001137,1.45e-09,6;UBERON:0001948,1.62e-08,5;UBERON:0002315,1.62e-08,5;UBERON:0002420,3.93e-08,8;UBERON:0007245,3.93e-08,8;UBERON:0010009,3.93e-08,8;UBERON:0010011,3.93e-08,8;UBERON:0000454,3.93e-08,8;UBERON:0000369,1.97e-07,5;UBERON:0002435,1.97e-07,5;UBERON:0000204,1.97e-07,5;UBERON:0010082,1.97e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.02316460859598,1.05798195854407,3.1691570175309,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.622137673850866,2.02508907497536,1.68259969081106,3.71346279724945,5.30084498283872,1.34739879136449,0.862609239164127,4.5960939330501,0,2.93680877595932,2.15049146558741,2.50583946687368,1.73826522844578,3.12548022334056,2.51264699101243,0,1.68078072554491,5.30331453852602,3.98640706237488,5.59198337475902,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.54927761754349,0,0,0,3.24736561516821,1.26679932737549,2.52762222507392,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,1.75668478206928,2.09446706813455,0,0,0,0,1.9472783122627,4.11750542536764,2.89005009859588,5.38855392596057,3.83573185995496,2.70124457927428,7.78758062725237,0.305518091550949,0.248813941220186,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,0.340182495756639,0.512454881139399,0.468508622798644,1.29351685369508,0,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,5.46753866266731,2.26390147234426,0.330418782983798,0,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.889512175379481,0.380451252225118,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0.189491411770485,0.651859905768103,0,0.704070744865506,0.167506257441816,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.318909537314974,0.491589944147214,0,0.433947175744535,0,0,0,0,2.88991061978026,7.14991288212439,0,0.504941854408746,0,0.780877488593277,1.29254038639679,0.477937595905104,0.668396022247182,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,2.89189184779626,0,0.534196811001766,0.162886959353576,0.329940245945071,0,1.45668381692989,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.646793418913773,0,0.532020700926821,0.178368817602071,0.658196082408484,0,2.11204537257339,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,2.22510362412612,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,0.86404272657441,1.04544148007234,1.09181281873089,0.539457385539283,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0,0.496375471371293,0.777804753376191,0.258319646955462,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0,0.596044064343795,0.480781798079875,0.295379054349154,0.605798699688886,0.228620419965,0.201652370273681,0.682205165178267,0.384847366561318,0.233753804363138,0.453460767230423,0,0,0,2.70465431645067,1.31377732815827,0.183151624267265,0,0,7.34177395402186,4.60325236507177,4.01026859407578,7.73339320546594,2.74033007908257,2.2661816921691,6.07520250208625,4.5032120322422,4.07828168085784,5.69536342927002,0.103787347584177,0,0.170733605754134,0.729320151204882,1.04806581313991,0.735374033800057,0,0.412070114477788,0,0.758091635291392,0.760437899670719,1.32038438970253,0.655490552289177,0.320125762024346,0.402048282689293,0.952587382566147,0.231768651889711,0.192909220463705,0.824171801606613,0.735994600671987,0.342869252385415,1.06485483695602,0.238436189947321,0.726732083161643,0.564656282491984,0.25384382367503,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.29551344712669,1.63692417267876,1.54936841185966,0.192906610981141,1.49886346762768,0.701794825336225,0.429742108096597,0,0.441182838239031,1.15933917810211 | |||
|short_description=p7@Mgat3 | |||
}} |
Revision as of 11:13, 13 September 2013
Short description: | p7@Mgat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Mgat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -491bp_to_ENSMUST00000044970, NM_010795, uc007wvf.1_5end |
EntrezGene: | Mgat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.00e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.00e-18 | 23 |
neuron | 3.75e-15 | 33 |
neuronal stem cell | 3.75e-15 | 33 |
neuroblast | 3.75e-15 | 33 |
electrically signaling cell | 3.75e-15 | 33 |
ectodermal cell | 4.76e-12 | 44 |
neurectodermal cell | 4.76e-12 | 44 |
electrically responsive cell | 7.14e-12 | 39 |
electrically active cell | 7.14e-12 | 39 |
neural cell | 2.63e-11 | 43 |
embryonic cell | 1.79e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.