FFCP PHASE1:Mm9::chr16:57471448..57471461,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=343|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:57471448..57471461,+|id=chr16:57471448..57471461,+|ontology_enrichment_celltype=CL:0000838!2.86e-22!12;CL:0000791!2.10e-20!9;CL:0000789!2.10e-20!9;CL:0002420!2.10e-20!9;CL:0002419!2.10e-20!9;CL:0000790!2.10e-20!9;CL:0000542!2.40e-20!13;CL:0000051!2.40e-20!13;CL:0000084!4.96e-20!11;CL:0000827!4.96e-20!11;CL:0000988!2.62e-19!32;CL:0002032!2.62e-19!32;CL:0000037!2.62e-19!32;CL:0000566!2.62e-19!32;CL:0000837!2.62e-19!32;CL:0000624!3.09e-18!8;CL:0002031!3.64e-15!25;CL:0000738!6.42e-15!17;CL:0002087!6.42e-15!17;CL:0000893!7.37e-14!6;CL:0002489!7.37e-14!6;CL:0000898!7.37e-14!6;CL:0000809!7.37e-14!6;CL:0000810!7.37e-14!6;CL:0000895!7.37e-14!6;CL:0000808!7.37e-14!6;CL:0000894!7.37e-14!6;CL:0000806!7.37e-14!6;CL:0000807!7.37e-14!6;CL:0000805!7.37e-14!6;CL:0002425!7.37e-14!6;CL:0002436!7.37e-14!6;CL:0002427!7.37e-14!6;CL:0002428!7.37e-14!6;CL:0002429!7.37e-14!6;CL:0002433!7.37e-14!6;CL:0002431!7.37e-14!6;CL:0002432!7.37e-14!6;CL:0002320!5.35e-12!46;CL:0000134!5.35e-12!46;CL:0000219!1.51e-09!54;CL:0000063!5.14e-07!66|ontology_enrichment_celltype_v019_2=CL:0000791,2.05e-46,9;CL:0000789,2.05e-46,9;CL:0002420,2.05e-46,9;CL:0002419,2.05e-46,9;CL:0000790,2.05e-46,9;CL:0000838,5.18e-43,12;CL:0000624,3.15e-41,8;CL:0000542,1.29e-39,13;CL:0000051,1.29e-39,13;CL:0000084,8.33e-38,11;CL:0000827,8.33e-38,11;CL:0000893,9.09e-31,6;CL:0002489,9.09e-31,6;CL:0000898,9.09e-31,6;CL:0000809,9.09e-31,6;CL:0000810,9.09e-31,6;CL:0000895,9.09e-31,6;CL:0000808,9.09e-31,6;CL:0000894,9.09e-31,6;CL:0000806,9.09e-31,6;CL:0000807,9.09e-31,6;CL:0000805,9.09e-31,6;CL:0002425,9.09e-31,6;CL:0002436,9.09e-31,6;CL:0002427,9.09e-31,6;CL:0002428,9.09e-31,6;CL:0002429,9.09e-31,6;CL:0002433,9.09e-31,6;CL:0002431,9.09e-31,6;CL:0002432,9.09e-31,6;CL:0000988,3.94e-30,32;CL:0002032,3.94e-30,32;CL:0000037,3.94e-30,32;CL:0000837,3.94e-30,32;CL:0000738,5.14e-30,17;CL:0002087,5.14e-30,17;CL:0002320,2.07e-20,46;CL:0000134,2.07e-20,46;CL:0002031,5.19e-20,25;CL:0000219,4.15e-17,54;CL:0000034,1.42e-13,97;CL:0000723,2.38e-09,91;CL:0000048,2.38e-09,91;CL:0000945,5.73e-07,1;CL:0000236,5.73e-07,1;CL:0000826,5.73e-07,1;CL:0000815,7.38e-07,1;CL:0000792,7.38e-07,1;CL:0000625,9.48e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.29e-24!29;UBERON:0002370!5.55e-22!23;UBERON:0000974!5.55e-22!23;UBERON:0004807!5.55e-22!23;UBERON:0005058!5.55e-22!23;UBERON:0003351!5.55e-22!23;UBERON:0009113!5.55e-22!23;UBERON:0003295!5.55e-22!23;UBERON:0009722!5.55e-22!23;UBERON:0005562!5.55e-22!23;UBERON:0007690!5.55e-22!23;UBERON:0002193!3.51e-21!48;UBERON:0002390!6.68e-21!45;UBERON:0003061!6.68e-21!45;UBERON:0006562!6.86e-21!24;UBERON:0003408!6.86e-21!24;UBERON:0001557!6.86e-21!24;UBERON:0001042!6.86e-21!24;UBERON:0008814!6.86e-21!24;UBERON:0009145!6.86e-21!24;UBERON:0000072!4.21e-18!27;UBERON:0000063!7.68e-15!35;UBERON:0002405!1.35e-12!70;UBERON:0002384!5.35e-12!46;UBERON:0000065!6.40e-12!41;UBERON:0001004!1.55e-11!42;UBERON:0005057!2.06e-11!51;UBERON:0003081!1.02e-10!88;UBERON:0003929!7.22e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.07e-20,46;UBERON:0002370,9.24e-08,23;UBERON:0000974,9.24e-08,23;UBERON:0004807,9.24e-08,23;UBERON:0005058,9.24e-08,23;UBERON:0003351,9.24e-08,23;UBERON:0009113,9.24e-08,23;UBERON:0003295,9.24e-08,23;UBERON:0009722,9.24e-08,23;UBERON:0005562,9.24e-08,23;UBERON:0007690,9.24e-08,23;UBERON:0006562,2.03e-07,24;UBERON:0003408,2.03e-07,24;UBERON:0001557,2.03e-07,24;UBERON:0001042,2.03e-07,24;UBERON:0008814,2.03e-07,24;UBERON:0009145,2.03e-07,24|phase1_expression=0,0,0,0,0,0,0,7.36002943616985,2.53419699873,3.97909694747389,1.36974374580404,1.27635454392538,5.47842335779858,7.43073420561478,0,0.404950534779652,0,0.473193248037357,0.685572168028694,0,0,0.695036658406197,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89247812106003,7.25362142011344,7.05796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,2.27648736561249,2.39961092397363,2.28726408731516,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.27338845544205,0.915112692826091,3.90950388985867,4.05859211738608,4.56059913554598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:57471448..57471461,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=343 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:57471448..57471461,+ | |||
|id=chr16:57471448..57471461,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.86e-22!12;CL:0000791!2.10e-20!9;CL:0000789!2.10e-20!9;CL:0002420!2.10e-20!9;CL:0002419!2.10e-20!9;CL:0000790!2.10e-20!9;CL:0000542!2.40e-20!13;CL:0000051!2.40e-20!13;CL:0000084!4.96e-20!11;CL:0000827!4.96e-20!11;CL:0000988!2.62e-19!32;CL:0002032!2.62e-19!32;CL:0000037!2.62e-19!32;CL:0000566!2.62e-19!32;CL:0000837!2.62e-19!32;CL:0000624!3.09e-18!8;CL:0002031!3.64e-15!25;CL:0000738!6.42e-15!17;CL:0002087!6.42e-15!17;CL:0000893!7.37e-14!6;CL:0002489!7.37e-14!6;CL:0000898!7.37e-14!6;CL:0000809!7.37e-14!6;CL:0000810!7.37e-14!6;CL:0000895!7.37e-14!6;CL:0000808!7.37e-14!6;CL:0000894!7.37e-14!6;CL:0000806!7.37e-14!6;CL:0000807!7.37e-14!6;CL:0000805!7.37e-14!6;CL:0002425!7.37e-14!6;CL:0002436!7.37e-14!6;CL:0002427!7.37e-14!6;CL:0002428!7.37e-14!6;CL:0002429!7.37e-14!6;CL:0002433!7.37e-14!6;CL:0002431!7.37e-14!6;CL:0002432!7.37e-14!6;CL:0002320!5.35e-12!46;CL:0000134!5.35e-12!46;CL:0000219!1.51e-09!54;CL:0000063!5.14e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.05e-46,9;CL:0000789,2.05e-46,9;CL:0002420,2.05e-46,9;CL:0002419,2.05e-46,9;CL:0000790,2.05e-46,9;CL:0000838,5.18e-43,12;CL:0000624,3.15e-41,8;CL:0000542,1.29e-39,13;CL:0000051,1.29e-39,13;CL:0000084,8.33e-38,11;CL:0000827,8.33e-38,11;CL:0000893,9.09e-31,6;CL:0002489,9.09e-31,6;CL:0000898,9.09e-31,6;CL:0000809,9.09e-31,6;CL:0000810,9.09e-31,6;CL:0000895,9.09e-31,6;CL:0000808,9.09e-31,6;CL:0000894,9.09e-31,6;CL:0000806,9.09e-31,6;CL:0000807,9.09e-31,6;CL:0000805,9.09e-31,6;CL:0002425,9.09e-31,6;CL:0002436,9.09e-31,6;CL:0002427,9.09e-31,6;CL:0002428,9.09e-31,6;CL:0002429,9.09e-31,6;CL:0002433,9.09e-31,6;CL:0002431,9.09e-31,6;CL:0002432,9.09e-31,6;CL:0000988,3.94e-30,32;CL:0002032,3.94e-30,32;CL:0000037,3.94e-30,32;CL:0000837,3.94e-30,32;CL:0000738,5.14e-30,17;CL:0002087,5.14e-30,17;CL:0002320,2.07e-20,46;CL:0000134,2.07e-20,46;CL:0002031,5.19e-20,25;CL:0000219,4.15e-17,54;CL:0000034,1.42e-13,97;CL:0000723,2.38e-09,91;CL:0000048,2.38e-09,91;CL:0000945,5.73e-07,1;CL:0000236,5.73e-07,1;CL:0000826,5.73e-07,1;CL:0000815,7.38e-07,1;CL:0000792,7.38e-07,1;CL:0000625,9.48e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.29e-24!29;UBERON:0002370!5.55e-22!23;UBERON:0000974!5.55e-22!23;UBERON:0004807!5.55e-22!23;UBERON:0005058!5.55e-22!23;UBERON:0003351!5.55e-22!23;UBERON:0009113!5.55e-22!23;UBERON:0003295!5.55e-22!23;UBERON:0009722!5.55e-22!23;UBERON:0005562!5.55e-22!23;UBERON:0007690!5.55e-22!23;UBERON:0002193!3.51e-21!48;UBERON:0002390!6.68e-21!45;UBERON:0003061!6.68e-21!45;UBERON:0006562!6.86e-21!24;UBERON:0003408!6.86e-21!24;UBERON:0001557!6.86e-21!24;UBERON:0001042!6.86e-21!24;UBERON:0008814!6.86e-21!24;UBERON:0009145!6.86e-21!24;UBERON:0000072!4.21e-18!27;UBERON:0000063!7.68e-15!35;UBERON:0002405!1.35e-12!70;UBERON:0002384!5.35e-12!46;UBERON:0000065!6.40e-12!41;UBERON:0001004!1.55e-11!42;UBERON:0005057!2.06e-11!51;UBERON:0003081!1.02e-10!88;UBERON:0003929!7.22e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.07e-20,46;UBERON:0002370,9.24e-08,23;UBERON:0000974,9.24e-08,23;UBERON:0004807,9.24e-08,23;UBERON:0005058,9.24e-08,23;UBERON:0003351,9.24e-08,23;UBERON:0009113,9.24e-08,23;UBERON:0003295,9.24e-08,23;UBERON:0009722,9.24e-08,23;UBERON:0005562,9.24e-08,23;UBERON:0007690,9.24e-08,23;UBERON:0006562,2.03e-07,24;UBERON:0003408,2.03e-07,24;UBERON:0001557,2.03e-07,24;UBERON:0001042,2.03e-07,24;UBERON:0008814,2.03e-07,24;UBERON:0009145,2.03e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,7.36002943616985,2.53419699873,3.97909694747389,1.36974374580404,1.27635454392538,5.47842335779858,7.43073420561478,0,0.404950534779652,0,0.473193248037357,0.685572168028694,0,0,0.695036658406197,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89247812106003,7.25362142011344,7.05796978199174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.510914110417183,2.27648736561249,2.39961092397363,2.28726408731516,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.27338845544205,0.915112692826091,3.90950388985867,4.05859211738608,4.56059913554598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.403865799792591,0.0762068066549998,0.201652370273681,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:57471448..57471461,+ | |||
}} |
Revision as of 12:57, 13 September 2013
Short description: | p@chr16:57471448..57471461, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:57471448..57471461, + |
Coexpression cluster: | MCL_coexpression_mm9:343 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.07e-20 | 46 |
thymus | 9.24e-08 | 23 |
neck | 9.24e-08 | 23 |
respiratory system epithelium | 9.24e-08 | 23 |
hemolymphoid system gland | 9.24e-08 | 23 |
pharyngeal epithelium | 9.24e-08 | 23 |
thymic region | 9.24e-08 | 23 |
pharyngeal gland | 9.24e-08 | 23 |
entire pharyngeal arch endoderm | 9.24e-08 | 23 |
thymus primordium | 9.24e-08 | 23 |
early pharyngeal endoderm | 9.24e-08 | 23 |
pharynx | 2.03e-07 | 24 |
gland of gut | 2.03e-07 | 24 |
upper respiratory tract | 2.03e-07 | 24 |
chordate pharynx | 2.03e-07 | 24 |
pharyngeal arch system | 2.03e-07 | 24 |
pharyngeal region of foregut | 2.03e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.