FFCP PHASE1:Mm9::chr16:72663276..72663289,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19876|HGNC=|MCL_coexpression_id=459|UniProt=G5E843,E9Q833,O89026,Q3UQ03,Q3UXH3,Q3V357,Q3UQW4|association_with_transcript=-104bp_to_ENSMUST00000023600,ENSMUST00000171732,NM_019413,uc007zqz.1,uc007zra.1,uc007zrb.1_5end|description=CAGE_peak_6_at_Robo1_5end|id=chr16:72663276..72663289,+|ontology_enrichment_celltype=CL:0000117!3.58e-11!23;CL:0000337!3.58e-11!23;CL:0000540!2.35e-09!33;CL:0000047!2.35e-09!33;CL:0000031!2.35e-09!33;CL:0000404!2.35e-09!33;CL:0000393!4.41e-07!39;CL:0000211!4.41e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-18,23;CL:0000337,1.74e-18,23;CL:0002609,3.09e-16,6;CL:0002608,6.76e-13,3;CL:0002613,1.15e-12,3;CL:0000540,2.71e-12,33;CL:0000047,2.71e-12,33;CL:0000031,2.71e-12,33;CL:0000404,2.71e-12,33;CL:0000393,4.21e-10,39;CL:0000211,4.21e-10,39;CL:0002319,5.57e-09,43;CL:0000221,9.87e-09,44;CL:0000133,9.87e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.57e-13!71;UBERON:0003075!1.57e-13!71;UBERON:0007284!1.57e-13!71;UBERON:0004121!1.51e-12!102;UBERON:0000924!1.51e-12!102;UBERON:0006601!1.51e-12!102;UBERON:0001049!4.28e-11!52;UBERON:0005068!4.28e-11!52;UBERON:0006241!4.28e-11!52;UBERON:0007135!4.28e-11!52;UBERON:0003056!8.09e-11!49;UBERON:0002020!8.95e-10!34;UBERON:0001017!9.90e-10!73;UBERON:0005743!9.90e-10!73;UBERON:0000033!3.03e-09!63;UBERON:0003080!3.66e-09!40;UBERON:0000073!5.84e-09!75;UBERON:0001016!5.84e-09!75;UBERON:0002616!9.01e-09!49;UBERON:0002780!9.74e-09!39;UBERON:0001890!9.74e-09!39;UBERON:0006240!9.74e-09!39;UBERON:0000955!2.60e-08!50;UBERON:0006238!2.60e-08!50;UBERON:0002791!7.35e-08!29;UBERON:0003528!7.35e-08!29;UBERON:0001893!7.35e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.94e-20,5;UBERON:0002435,3.94e-20,5;UBERON:0000204,3.94e-20,5;UBERON:0010082,3.94e-20,5;UBERON:0002020,1.80e-14,34;UBERON:0002420,1.70e-12,8;UBERON:0007245,1.70e-12,8;UBERON:0010009,1.70e-12,8;UBERON:0010011,1.70e-12,8;UBERON:0000454,1.70e-12,8;UBERON:0003528,4.71e-12,29;UBERON:0002791,4.71e-12,29;UBERON:0001893,4.71e-12,29;UBERON:0002780,2.33e-10,39;UBERON:0001890,2.33e-10,39;UBERON:0006240,2.33e-10,39;UBERON:0001049,2.49e-10,52;UBERON:0005068,2.49e-10,52;UBERON:0006241,2.49e-10,52;UBERON:0007135,2.49e-10,52;UBERON:0003080,4.74e-10,40;UBERON:0000073,7.39e-10,54;UBERON:0010371,3.59e-09,73;UBERON:0002616,1.76e-08,46;UBERON:0000955,2.93e-08,47;UBERON:0006238,2.93e-08,47;UBERON:0002346,6.14e-08,64;UBERON:0003075,6.14e-08,64;UBERON:0007284,6.14e-08,64;UBERON:0001017,7.40e-08,73;UBERON:0003056,7.67e-08,49;UBERON:0001016,1.41e-07,75;UBERON:0004121,1.91e-07,95;UBERON:0000924,1.91e-07,95;UBERON:0006601,1.91e-07,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,1.0165335962074,0,0,0,0,0,0,1.65903379693564,1.08004750665353,0.841299845405528,0.285650984403804,0.220868540951614,2.44981598429908,2.20444583341944,3.67687514644008,0,0.255374676170375,0.46081959976873,2.1101806036831,1.82975287204819,2.6045668527838,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,1.13897344639282,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0,0.608930956624282,0.691846491768175,0.452167921657868,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.599162557619291,1.83000241127451,8.04187853522332,0.347648640384553,0.511430914660661,0,0.973447578406546,0.203678727700633,0.124406970610093,0,0.210441855886474,0.910843100738926,0.229902104433473,0,0.452114453507145,0.476255494059295,0.384341160854549,0.843315521037559,0.258703370739016,0.431135985865684,0.945530400839096,1.40760899331159,1.09597866213787,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0.414251545071004,0,0.540186184383045,0.473489471170421,0.787056926989615,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0.420579897128254,0.823236899034275,0,0.264450566663544,0.426576501070468,1.62565670302307,0.38660238396628,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0.799739588268102,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0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| ||
|EntrezGene=19876 | |||
|HGNC= | |||
|MCL_coexpression_id=459 | |||
|UniProt=G5E843,E9Q833,O89026,Q3UQ03,Q3UXH3,Q3V357,Q3UQW4 | |||
|association_with_transcript=-104bp_to_ENSMUST00000023600,ENSMUST00000171732,NM_019413,uc007zqz.1,uc007zra.1,uc007zrb.1_5end | |||
|description=CAGE_peak_6_at_Robo1_5end | |||
|id=chr16:72663276..72663289,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.58e-11!23;CL:0000337!3.58e-11!23;CL:0000540!2.35e-09!33;CL:0000047!2.35e-09!33;CL:0000031!2.35e-09!33;CL:0000404!2.35e-09!33;CL:0000393!4.41e-07!39;CL:0000211!4.41e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-18,23;CL:0000337,1.74e-18,23;CL:0002609,3.09e-16,6;CL:0002608,6.76e-13,3;CL:0002613,1.15e-12,3;CL:0000540,2.71e-12,33;CL:0000047,2.71e-12,33;CL:0000031,2.71e-12,33;CL:0000404,2.71e-12,33;CL:0000393,4.21e-10,39;CL:0000211,4.21e-10,39;CL:0002319,5.57e-09,43;CL:0000221,9.87e-09,44;CL:0000133,9.87e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.57e-13!71;UBERON:0003075!1.57e-13!71;UBERON:0007284!1.57e-13!71;UBERON:0004121!1.51e-12!102;UBERON:0000924!1.51e-12!102;UBERON:0006601!1.51e-12!102;UBERON:0001049!4.28e-11!52;UBERON:0005068!4.28e-11!52;UBERON:0006241!4.28e-11!52;UBERON:0007135!4.28e-11!52;UBERON:0003056!8.09e-11!49;UBERON:0002020!8.95e-10!34;UBERON:0001017!9.90e-10!73;UBERON:0005743!9.90e-10!73;UBERON:0000033!3.03e-09!63;UBERON:0003080!3.66e-09!40;UBERON:0000073!5.84e-09!75;UBERON:0001016!5.84e-09!75;UBERON:0002616!9.01e-09!49;UBERON:0002780!9.74e-09!39;UBERON:0001890!9.74e-09!39;UBERON:0006240!9.74e-09!39;UBERON:0000955!2.60e-08!50;UBERON:0006238!2.60e-08!50;UBERON:0002791!7.35e-08!29;UBERON:0003528!7.35e-08!29;UBERON:0001893!7.35e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.94e-20,5;UBERON:0002435,3.94e-20,5;UBERON:0000204,3.94e-20,5;UBERON:0010082,3.94e-20,5;UBERON:0002020,1.80e-14,34;UBERON:0002420,1.70e-12,8;UBERON:0007245,1.70e-12,8;UBERON:0010009,1.70e-12,8;UBERON:0010011,1.70e-12,8;UBERON:0000454,1.70e-12,8;UBERON:0003528,4.71e-12,29;UBERON:0002791,4.71e-12,29;UBERON:0001893,4.71e-12,29;UBERON:0002780,2.33e-10,39;UBERON:0001890,2.33e-10,39;UBERON:0006240,2.33e-10,39;UBERON:0001049,2.49e-10,52;UBERON:0005068,2.49e-10,52;UBERON:0006241,2.49e-10,52;UBERON:0007135,2.49e-10,52;UBERON:0003080,4.74e-10,40;UBERON:0000073,7.39e-10,54;UBERON:0010371,3.59e-09,73;UBERON:0002616,1.76e-08,46;UBERON:0000955,2.93e-08,47;UBERON:0006238,2.93e-08,47;UBERON:0002346,6.14e-08,64;UBERON:0003075,6.14e-08,64;UBERON:0007284,6.14e-08,64;UBERON:0001017,7.40e-08,73;UBERON:0003056,7.67e-08,49;UBERON:0001016,1.41e-07,75;UBERON:0004121,1.91e-07,95;UBERON:0000924,1.91e-07,95;UBERON:0006601,1.91e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,1.0165335962074,0,0,0,0,0,0,1.65903379693564,1.08004750665353,0.841299845405528,0.285650984403804,0.220868540951614,2.44981598429908,2.20444583341944,3.67687514644008,0,0.255374676170375,0.46081959976873,2.1101806036831,1.82975287204819,2.6045668527838,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,1.13897344639282,1.3047961207771,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0,0,0,0.148442139064825,0,0.608930956624282,0.691846491768175,0.452167921657868,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.599162557619291,1.83000241127451,8.04187853522332,0.347648640384553,0.511430914660661,0,0.973447578406546,0.203678727700633,0.124406970610093,0,0.210441855886474,0.910843100738926,0.229902104433473,0,0.452114453507145,0.476255494059295,0.384341160854549,0.843315521037559,0.258703370739016,0.431135985865684,0.945530400839096,1.40760899331159,1.09597866213787,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0.414251545071004,0,0.540186184383045,0.473489471170421,0.787056926989615,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0.420579897128254,0.823236899034275,0,0.264450566663544,0.426576501070468,1.62565670302307,0.38660238396628,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0.799739588268102,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,1.50035924522115,0.886701168211368,0.535106452806212,0.493647061806363,0,0,0,0,0.16488625294148,0.645857706783622,0.844380948994182,1.07435109602823,1.80554989719567,0,0.556275906031529,0.170870880797853,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,0,1.04661582230785,0.66183396182839,0,0.258319646955462,0,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0.31136204275253,0.798049746802062,1.19513524027894,0,0.838452650511929,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,1.13175804831646,0.468207537349412,0.384150914429216,0.34461281373368,0.476293691283074,0.463537303779422,0.77163688185482,0,0.147198920134397,0,0.887379030796687,0.715308569841963,0.436039249896986,0.282328141245992,0.338458431566706,0,0.263069711437843,0,0,0.474540072496697,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.999242311751784,0.467863216890817,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p6@Robo1 | |||
}} |
Revision as of 13:04, 13 September 2013
Short description: | p6@Robo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Robo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | -104bp_to_ENSMUST00000023600, ENSMUST00000171732, NM_019413, uc007zqz.1, uc007zra.1, uc007zrb.1_5end |
EntrezGene: | Robo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.74e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.74e-18 | 23 |
neuron of cerebral cortex | 3.09e-16 | 6 |
hippocampal neuron | 6.76e-13 | 3 |
striatum neuron | 1.15e-12 | 3 |
neuron | 2.71e-12 | 33 |
neuronal stem cell | 2.71e-12 | 33 |
neuroblast | 2.71e-12 | 33 |
electrically signaling cell | 2.71e-12 | 33 |
electrically responsive cell | 4.21e-10 | 39 |
electrically active cell | 4.21e-10 | 39 |
neural cell | 5.57e-09 | 43 |
ectodermal cell | 9.87e-09 | 44 |
neurectodermal cell | 9.87e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.