FFCP PHASE1:Hg19::chr5:137911022..137911036,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5244 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000504902_5end | |||
|description=CAGE_peak_2_at_HSPA9_5end | |||
|id=chr5:137911022..137911036,- | |||
|ontology_enrichment_celltype=CL:0000037!8.67e-28!172;CL:0000566!8.67e-28!172;CL:0000988!3.73e-26!182;CL:0000738!1.30e-24!140;CL:0002032!1.49e-24!165;CL:0000837!1.49e-24!165;CL:0002087!6.25e-24!119;CL:0002031!1.21e-21!124;CL:0000763!6.16e-13!112;CL:0000049!6.16e-13!112;CL:0002009!4.41e-12!65;CL:0000557!7.70e-12!71;CL:0000542!8.40e-12!53;CL:0000051!8.40e-12!53;CL:0000838!2.28e-11!52;CL:0002194!3.02e-11!63;CL:0000576!3.02e-11!63;CL:0000040!3.02e-11!63;CL:0000559!3.02e-11!63;CL:0000766!1.89e-10!76;CL:0000839!5.27e-10!70;CL:0000084!9.98e-09!25;CL:0000827!9.98e-09!25;CL:0000860!2.70e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.04e-08;25!CL:0000473;2.58e-07;39!CL:0000234;2.58e-07;39!CL:0000542;4.75e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.15e-27,168;CL:0000988,9.83e-27,177;CL:0000738,1.50e-24,136;CL:0002032,2.00e-24,161;CL:0000837,2.00e-24,161;CL:0002087,6.51e-24,115;CL:0002031,1.41e-21,120;CL:0000763,8.04e-13,108;CL:0000049,8.04e-13,108;CL:0002009,4.34e-12,61;CL:0000557,8.27e-12,67;CL:0000542,8.39e-12,53;CL:0000051,8.39e-12,53;CL:0000838,2.28e-11,52;CL:0002194,3.06e-11,59;CL:0000576,3.06e-11,59;CL:0000040,3.06e-11,59;CL:0000559,3.06e-11,59;CL:0000766,2.18e-10,72;CL:0000839,6.20e-10,66;CL:0000084,9.97e-09,25;CL:0000827,9.97e-09,25;CL:0000473,1.57e-08,48;CL:0000234,1.57e-08,48 | |||
|ontology_enrichment_development_v019=CL:0000051;4.75e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.39e-20!235;DOID:14566!3.39e-20!239;DOID:0050687!6.75e-12!143;DOID:0050686!8.24e-11!137;DOID:305!1.19e-10!106;DOID:2531!1.09e-09!51;DOID:0060083!1.09e-09!51;DOID:1240!4.85e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.42e-20,235;DOID:14566,3.46e-20,239;DOID:0050687,6.88e-12,143;DOID:0050686,8.40e-11,137;DOID:305,1.22e-10,106;DOID:2531,1.09e-09,51;DOID:0060083,1.09e-09,51;DOID:1240,4.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.08e-12!102;UBERON:0003061!7.08e-12!102;UBERON:0001474!2.01e-10!86;UBERON:0002371!1.43e-09!80;UBERON:0002193!1.02e-08!112;UBERON:0002405!6.67e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.79e-12,98;UBERON:0003061,9.79e-12,98;UBERON:0001474,2.68e-10,82;UBERON:0002371,1.90e-09,76;UBERON:0002193,1.49e-08,108;UBERON:0004765,1.43e-07,90;UBERON:0002405,5.24e-07,93 | |||
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| |||
|short_description=p2@HSPA9 | |||
}} |
Revision as of 13:25, 13 September 2013
Short description: | p2@HSPA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HSPA9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504902_5end |
EntrezGene: | HSPA9 |
HGNC: | 5244 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.15e-27 | 168 |
hematopoietic cell | 9.83e-27 | 177 |
leukocyte | 1.50e-24 | 136 |
hematopoietic oligopotent progenitor cell | 2.00e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-24 | 161 |
nongranular leukocyte | 6.51e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 1.41e-21 | 120 |
myeloid cell | 8.04e-13 | 108 |
common myeloid progenitor | 8.04e-13 | 108 |
macrophage dendritic cell progenitor | 4.34e-12 | 61 |
granulocyte monocyte progenitor cell | 8.27e-12 | 67 |
lymphocyte | 8.39e-12 | 53 |
common lymphoid progenitor | 8.39e-12 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-11 | 52 |
monopoietic cell | 3.06e-11 | 59 |
monocyte | 3.06e-11 | 59 |
monoblast | 3.06e-11 | 59 |
promonocyte | 3.06e-11 | 59 |
myeloid leukocyte | 2.18e-10 | 72 |
myeloid lineage restricted progenitor cell | 6.20e-10 | 66 |
T cell | 9.97e-09 | 25 |
pro-T cell | 9.97e-09 | 25 |
defensive cell | 1.57e-08 | 48 |
phagocyte | 1.57e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.79e-12 | 98 |
blood island | 9.79e-12 | 98 |
bone element | 2.68e-10 | 82 |
bone marrow | 1.90e-09 | 76 |
hemolymphoid system | 1.49e-08 | 108 |
skeletal element | 1.43e-07 | 90 |
immune system | 5.24e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.42e-20 | 235 |
disease of cellular proliferation | 3.46e-20 | 239 |
cell type cancer | 6.88e-12 | 143 |
organ system cancer | 8.40e-11 | 137 |
carcinoma | 1.22e-10 | 106 |
hematologic cancer | 1.09e-09 | 51 |
immune system cancer | 1.09e-09 | 51 |
leukemia | 4.85e-07 | 39 |
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