FFCP PHASE1:Mm9::chr17:32673561..32673575,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70101|HGNC=|MCL_coexpression_id=12|UniProt=E9QB04,Q99N17,Q3V1F1|association_with_transcript=0bp_to_ENSMUST00000169252,NM_024442,uc008bxf.1,uc008bxg.1,uc008bxh.1_5end|description=CAGE_peak_3_at_Cyp4f16_5end|id=chr17:32673561..32673575,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.07e-14,6;CL:0000677,1.07e-14,6;CL:0000584,1.07e-14,6;CL:0000075,1.73e-12,7;CL:0000066,1.03e-09,25;CL:0002563,1.53e-09,9;CL:0002251,1.53e-09,9;CL:0000682,1.05e-08,3;CL:0002076,4.68e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.69e-10!43;UBERON:0000344!5.66e-10!15;UBERON:0005409!1.68e-09!59;UBERON:0001242!2.38e-08!13;UBERON:0000060!2.38e-08!13;UBERON:0001262!2.38e-08!13;UBERON:0004786!2.38e-08!13;UBERON:0004923!3.23e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.89e-40,31;UBERON:0005409,2.45e-24,47;UBERON:0000344,3.13e-22,15;UBERON:0001242,1.20e-17,13;UBERON:0001262,1.20e-17,13;UBERON:0004786,1.20e-17,13;UBERON:0004923,7.66e-13,24;UBERON:0002108,3.22e-10,4;UBERON:0001007,4.48e-10,116;UBERON:0001555,4.48e-10,116;UBERON:0007026,4.48e-10,116;UBERON:0004119,8.52e-10,118;UBERON:0000925,8.52e-10,118;UBERON:0006595,8.52e-10,118;UBERON:0003350,1.53e-09,9;UBERON:0004808,1.53e-09,9;UBERON:0001277,1.53e-09,9;UBERON:0002465,2.59e-08,3;UBERON:0004921,2.79e-08,114;UBERON:0000331,3.82e-08,3;UBERON:0002116,3.82e-08,3;UBERON:0001204,3.82e-08,3;UBERON:0001168,3.82e-08,3;UBERON:0000485,1.15e-07,11|phase1_expression=0,32.4547129104606,20.0199665331396,46.5794885412518,59.6065918636153,1.34303417529512,3.73780224952841,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,1.10411757875383,1.91960207048034,0.42438965179803,0,0.297872853602656,0,50.3976131799231,45.6524469323668,22.9692785646008,56.8605834929979,38.78482188346,32.1139578881272,12.0974462284767,7.76056787293567,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0.573066879877513,0,0,0,0,0.338844532069132,0,1.3498495759221,1.97773272513395,0.7104801149461,0.599200221036809,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.604572480854284,1.15945795480671,0,0,0,0,0,2.24711072210803,0,0,0.70667914902068,0,1.28326477414318,0,0,0,0,0,1.25602267690966,3.10725460376606,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,13.2837668708468,0,0,0.127070227073065,0,0,0,0,0,0.41557608911912,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0.378212160335639,0,0,0,0,0,0.398068533636986,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0,0,27.755177770639,18.2470890997846,0,0.464473343720877,0.128867461322093,2.21851877085677,2.00140239460383,3.23383564391351,10.4396393539793,3.62337700392824,5.02670417600539,5.76973768919337,7.01870713628832,9.88701349519644,10.3746263939853,2.98711909881551,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.714130922658041,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0.160550589987792,0.35163505977661,0,0,0,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0.790575555893047,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,2.32585463851399,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0.220528398054962,0.65954501176592,0,0.120625849856312,0,0,8.16146342563582,0.18542530201051,0.683483523191411,0,0,0.188368457004691,0.546776910884101,0.686334519619568,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.777689839750757,0,0,0.299033092087958,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.467507608726276,0,0,0,0,0,0.563047426353546,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0,0.701794825336225,0.429742108096597,0,0,0|short_description=p3@Cyp4f16}} | ||
|EntrezGene=70101 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=E9QB04,Q99N17,Q3V1F1 | |||
|association_with_transcript=0bp_to_ENSMUST00000169252,NM_024442,uc008bxf.1,uc008bxg.1,uc008bxh.1_5end | |||
|description=CAGE_peak_3_at_Cyp4f16_5end | |||
|id=chr17:32673561..32673575,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.07e-14,6;CL:0000677,1.07e-14,6;CL:0000584,1.07e-14,6;CL:0000075,1.73e-12,7;CL:0000066,1.03e-09,25;CL:0002563,1.53e-09,9;CL:0002251,1.53e-09,9;CL:0000682,1.05e-08,3;CL:0002076,4.68e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.69e-10!43;UBERON:0000344!5.66e-10!15;UBERON:0005409!1.68e-09!59;UBERON:0001242!2.38e-08!13;UBERON:0000060!2.38e-08!13;UBERON:0001262!2.38e-08!13;UBERON:0004786!2.38e-08!13;UBERON:0004923!3.23e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.89e-40,31;UBERON:0005409,2.45e-24,47;UBERON:0000344,3.13e-22,15;UBERON:0001242,1.20e-17,13;UBERON:0001262,1.20e-17,13;UBERON:0004786,1.20e-17,13;UBERON:0004923,7.66e-13,24;UBERON:0002108,3.22e-10,4;UBERON:0001007,4.48e-10,116;UBERON:0001555,4.48e-10,116;UBERON:0007026,4.48e-10,116;UBERON:0004119,8.52e-10,118;UBERON:0000925,8.52e-10,118;UBERON:0006595,8.52e-10,118;UBERON:0003350,1.53e-09,9;UBERON:0004808,1.53e-09,9;UBERON:0001277,1.53e-09,9;UBERON:0002465,2.59e-08,3;UBERON:0004921,2.79e-08,114;UBERON:0000331,3.82e-08,3;UBERON:0002116,3.82e-08,3;UBERON:0001204,3.82e-08,3;UBERON:0001168,3.82e-08,3;UBERON:0000485,1.15e-07,11 | |||
|phase1_expression=0,32.4547129104606,20.0199665331396,46.5794885412518,59.6065918636153,1.34303417529512,3.73780224952841,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,1.10411757875383,1.91960207048034,0.42438965179803,0,0.297872853602656,0,50.3976131799231,45.6524469323668,22.9692785646008,56.8605834929979,38.78482188346,32.1139578881272,12.0974462284767,7.76056787293567,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0.573066879877513,0,0,0,0,0.338844532069132,0,1.3498495759221,1.97773272513395,0.7104801149461,0.599200221036809,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0.604572480854284,1.15945795480671,0,0,0,0,0,2.24711072210803,0,0,0.70667914902068,0,1.28326477414318,0,0,0,0,0,1.25602267690966,3.10725460376606,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,13.2837668708468,0,0,0.127070227073065,0,0,0,0,0,0.41557608911912,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0.378212160335639,0,0,0,0,0,0.398068533636986,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0,0,27.755177770639,18.2470890997846,0,0.464473343720877,0.128867461322093,2.21851877085677,2.00140239460383,3.23383564391351,10.4396393539793,3.62337700392824,5.02670417600539,5.76973768919337,7.01870713628832,9.88701349519644,10.3746263939853,2.98711909881551,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.714130922658041,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0.160550589987792,0.35163505977661,0,0,0,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0.790575555893047,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,2.32585463851399,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0.220528398054962,0.65954501176592,0,0.120625849856312,0,0,8.16146342563582,0.18542530201051,0.683483523191411,0,0,0.188368457004691,0.546776910884101,0.686334519619568,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.777689839750757,0,0,0.299033092087958,0,0,0,0,0,0.39061315453185,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.467507608726276,0,0,0,0,0,0.563047426353546,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.17230640686684,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0,0.701794825336225,0.429742108096597,0,0,0 | |||
|short_description=p3@Cyp4f16 | |||
}} |
Revision as of 14:07, 13 September 2013
Short description: | p3@Cyp4f16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp4f16_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000169252, NM_024442, uc008bxf.1, uc008bxg.1, uc008bxh.1_5end |
EntrezGene: | Cyp4f16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.07e-14 | 6 |
gut absorptive cell | 1.07e-14 | 6 |
enterocyte | 1.07e-14 | 6 |
columnar/cuboidal epithelial cell | 1.73e-12 | 7 |
epithelial cell | 1.03e-09 | 25 |
intestinal epithelial cell | 1.53e-09 | 9 |
epithelial cell of alimentary canal | 1.53e-09 | 9 |
M cell of gut | 1.05e-08 | 3 |
endo-epithelial cell | 4.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.89e-40 | 31 |
gastrointestinal system | 2.45e-24 | 47 |
mucosa | 3.13e-22 | 15 |
intestinal mucosa | 1.20e-17 | 13 |
wall of intestine | 1.20e-17 | 13 |
gastrointestinal system mucosa | 1.20e-17 | 13 |
organ component layer | 7.66e-13 | 24 |
small intestine | 3.22e-10 | 4 |
digestive system | 4.48e-10 | 116 |
digestive tract | 4.48e-10 | 116 |
primitive gut | 4.48e-10 | 116 |
endoderm-derived structure | 8.52e-10 | 118 |
endoderm | 8.52e-10 | 118 |
presumptive endoderm | 8.52e-10 | 118 |
epithelium of mucosa | 1.53e-09 | 9 |
gastrointestinal system epithelium | 1.53e-09 | 9 |
intestinal epithelium | 1.53e-09 | 9 |
lymphoid system | 2.59e-08 | 3 |
subdivision of digestive tract | 2.79e-08 | 114 |
ileal mucosa | 3.82e-08 | 3 |
ileum | 3.82e-08 | 3 |
mucosa of small intestine | 3.82e-08 | 3 |
wall of small intestine | 3.82e-08 | 3 |
simple columnar epithelium | 1.15e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.