Personal tools

FFCP PHASE1:Mm9::chr17:34047191..34047206,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=13163|HGNC=|MCL_coexpression_id=1279|UniProt=|association_with_transcript=-15bp_to_ENSMUST00000172859_5end|description=CAGE_peak_3_at_Daxx_5end|id=chr17:34047191..34047206,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.31e-10!48;UBERON:0002390!3.65e-10!45;UBERON:0003061!3.65e-10!45;UBERON:0002405!7.84e-10!70;UBERON:0004119!1.51e-07!130;UBERON:0000925!1.51e-07!130;UBERON:0006595!1.51e-07!130;UBERON:0004923!1.77e-07!24;UBERON:0004177!2.19e-07!29;UBERON:0000490!4.82e-07!66;UBERON:0003081!4.93e-07!88;UBERON:0001007!8.97e-07!128;UBERON:0001555!8.97e-07!128;UBERON:0007026!8.97e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-12,45;UBERON:0003061,1.37e-12,45;UBERON:0002193,1.63e-12,48;UBERON:0002405,1.63e-12,48;UBERON:0000077,2.05e-10,35;UBERON:0004177,3.03e-09,29;UBERON:0005057,3.03e-09,29;UBERON:0003081,1.53e-08,87;UBERON:0000926,3.97e-08,120;UBERON:0004120,3.97e-08,120;UBERON:0006603,3.97e-08,120;UBERON:0004119,1.30e-07,118;UBERON:0000925,1.30e-07,118;UBERON:0006595,1.30e-07,118;UBERON:0002370,1.80e-07,23;UBERON:0000974,1.80e-07,23;UBERON:0004807,1.80e-07,23;UBERON:0005058,1.80e-07,23;UBERON:0003351,1.80e-07,23;UBERON:0009113,1.80e-07,23;UBERON:0003295,1.80e-07,23;UBERON:0009722,1.80e-07,23;UBERON:0005562,1.80e-07,23;UBERON:0007690,1.80e-07,23;UBERON:0006562,5.46e-07,24;UBERON:0003408,5.46e-07,24;UBERON:0001557,5.46e-07,24;UBERON:0001042,5.46e-07,24;UBERON:0008814,5.46e-07,24;UBERON:0009145,5.46e-07,24;UBERON:0004921,6.99e-07,114;UBERON:0000490,7.27e-07,66|phase1_expression=0.320297694209588,2.09385244583617,2.27499619694768,2.41971369045464,3.00537437967808,0.671517087647559,0.700837921786577,7.48915275961142,1.12630977721333,1.17032263160997,0.34243593645101,0.159544317990673,13.8672591244277,6.90621179110079,0.666219523631325,2.02475267389826,1.39912375625629,1.41957974411207,0.822686601634433,0.84877930359606,1.27564935226605,0,0.261199789138935,0.639969691173627,0.22940928106717,0,1.7230479846363,1.29282739611533,1.33016393619462,0.504060259519861,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,1.67412652294763,0.7813353445238,2.61761871986899,1.17646297606203,3.41522742479223,4.36959317728038,0.251793635951155,0.304130793658544,0,2.34717403304412,0,0.219686182734472,0.194429899074283,0.279972843250725,0,1.34226084846189,6.5282592781021,3.02484419228218,3.60163210450326,1.14613375975503,3.09403255366465,0,0,0,0.338844532069132,0.889294796111139,2.2497492932035,8.89979726310277,4.2628806896766,2.09720077362883,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0.529000920747499,31.5952292684829,1.72084775396277,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0.779358013808606,0,0,1.28326477414318,0,0,0.432982082022428,0,0,1.37020655662872,4.40194402200192,0.29688427812965,0.173485326766136,0.304465478312141,0,0.60289056221049,1.29347577849275,0.376999773989026,2.22475470960936,1.59059292611903,1.76922110389975,0,0.441683036920787,0.969750506270444,0,0,0,1.78819938646014,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0.804820204198858,0.467061369468678,0,0,0.162137619091711,0.146199987425332,0.878200461164203,0,0,0,3.96502539580558,7.66906643324278,0,0,0.257734922644187,0,0.444756087689741,1.33157938278791,0.474529061544512,1.15289268306808,0.502670417600539,1.39269530428806,2.9244613067868,2.69645822596266,1.72910439899755,0.995706366271836,0.758671603812327,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.627994911365499,0.123397163921801,0.889357881261447,0.333690211432188,0,0,0.202860121388503,0.964708639009667,0.50925170356284,1.43848068725405,0.648540907100142,0,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,1.25578189465339,0,1.47802552133284,0,0,0.169745085775188,0.234690248288502,0,1.42826184531608,0,0.472905432318573,1.32878813789265,0.159454768657487,1.3109065177259,1.72684981865896,0.723245292907558,15.0791283939272,33.1782467129413,0,0.827810238914197,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0,0.295301892880773,0,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,9.38686832254841,6.35496212591461,0,0.98931751764888,1.93757312035087,0.542816324353403,0.358117032009409,0.328281799490123,2.04036585640896,0,2.39219233116994,0.619160603889667,2.22233432843654,0.753473828018764,1.50363650493128,2.51655990527175,0.169978429993855,0.839708713941948,0.690999869022119,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.87345025498471,0.404593039154462,0.330613822901344,0.785267825952089,0.777689839750757,0,1.12738587736838,0,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.911430693907651,3.25063967719704,2.17425708743405,3.16833006883652,2.21207784439725,0,0.924398614483445,1.94881234466693,0.895133478337407,1.39076948346885,1.80293174279953,1.77227432609493,1.41353029927407,1.5241361331,1.31074040677893,1.8516997340553,2.30908419936791,2.10378423926824,0.680191150845634,1.33191572024439,0.179427713218951,1.67884616364078,0,6.56888664079137,1.83151624267265,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.532427418478012,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0,1.16965804222704,0.214871054048298,0.382576664137687,0.220591419119515,0.463735671240843|short_description=p3@Daxx}}
|EntrezGene=13163
|HGNC=
|MCL_coexpression_id=1279
|UniProt=
|association_with_transcript=-15bp_to_ENSMUST00000172859_5end
|description=CAGE_peak_3_at_Daxx_5end
|id=chr17:34047191..34047206,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.31e-10!48;UBERON:0002390!3.65e-10!45;UBERON:0003061!3.65e-10!45;UBERON:0002405!7.84e-10!70;UBERON:0004119!1.51e-07!130;UBERON:0000925!1.51e-07!130;UBERON:0006595!1.51e-07!130;UBERON:0004923!1.77e-07!24;UBERON:0004177!2.19e-07!29;UBERON:0000490!4.82e-07!66;UBERON:0003081!4.93e-07!88;UBERON:0001007!8.97e-07!128;UBERON:0001555!8.97e-07!128;UBERON:0007026!8.97e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-12,45;UBERON:0003061,1.37e-12,45;UBERON:0002193,1.63e-12,48;UBERON:0002405,1.63e-12,48;UBERON:0000077,2.05e-10,35;UBERON:0004177,3.03e-09,29;UBERON:0005057,3.03e-09,29;UBERON:0003081,1.53e-08,87;UBERON:0000926,3.97e-08,120;UBERON:0004120,3.97e-08,120;UBERON:0006603,3.97e-08,120;UBERON:0004119,1.30e-07,118;UBERON:0000925,1.30e-07,118;UBERON:0006595,1.30e-07,118;UBERON:0002370,1.80e-07,23;UBERON:0000974,1.80e-07,23;UBERON:0004807,1.80e-07,23;UBERON:0005058,1.80e-07,23;UBERON:0003351,1.80e-07,23;UBERON:0009113,1.80e-07,23;UBERON:0003295,1.80e-07,23;UBERON:0009722,1.80e-07,23;UBERON:0005562,1.80e-07,23;UBERON:0007690,1.80e-07,23;UBERON:0006562,5.46e-07,24;UBERON:0003408,5.46e-07,24;UBERON:0001557,5.46e-07,24;UBERON:0001042,5.46e-07,24;UBERON:0008814,5.46e-07,24;UBERON:0009145,5.46e-07,24;UBERON:0004921,6.99e-07,114;UBERON:0000490,7.27e-07,66
|phase1_expression=0.320297694209588,2.09385244583617,2.27499619694768,2.41971369045464,3.00537437967808,0.671517087647559,0.700837921786577,7.48915275961142,1.12630977721333,1.17032263160997,0.34243593645101,0.159544317990673,13.8672591244277,6.90621179110079,0.666219523631325,2.02475267389826,1.39912375625629,1.41957974411207,0.822686601634433,0.84877930359606,1.27564935226605,0,0.261199789138935,0.639969691173627,0.22940928106717,0,1.7230479846363,1.29282739611533,1.33016393619462,0.504060259519861,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,1.67412652294763,0.7813353445238,2.61761871986899,1.17646297606203,3.41522742479223,4.36959317728038,0.251793635951155,0.304130793658544,0,2.34717403304412,0,0.219686182734472,0.194429899074283,0.279972843250725,0,1.34226084846189,6.5282592781021,3.02484419228218,3.60163210450326,1.14613375975503,3.09403255366465,0,0,0,0.338844532069132,0.889294796111139,2.2497492932035,8.89979726310277,4.2628806896766,2.09720077362883,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0.529000920747499,31.5952292684829,1.72084775396277,0,0,0.649776417447669,0,0.280888840263504,0.340860645156116,0.779358013808606,0,0,1.28326477414318,0,0,0.432982082022428,0,0,1.37020655662872,4.40194402200192,0.29688427812965,0.173485326766136,0.304465478312141,0,0.60289056221049,1.29347577849275,0.376999773989026,2.22475470960936,1.59059292611903,1.76922110389975,0,0.441683036920787,0.969750506270444,0,0,0,1.78819938646014,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0.804820204198858,0.467061369468678,0,0,0.162137619091711,0.146199987425332,0.878200461164203,0,0,0,3.96502539580558,7.66906643324278,0,0,0.257734922644187,0,0.444756087689741,1.33157938278791,0.474529061544512,1.15289268306808,0.502670417600539,1.39269530428806,2.9244613067868,2.69645822596266,1.72910439899755,0.995706366271836,0.758671603812327,0,0,0,0,0.210407459670956,0.0632365371242573,0,0.627994911365499,0.123397163921801,0.889357881261447,0.333690211432188,0,0,0.202860121388503,0.964708639009667,0.50925170356284,1.43848068725405,0.648540907100142,0,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,1.25578189465339,0,1.47802552133284,0,0,0.169745085775188,0.234690248288502,0,1.42826184531608,0,0.472905432318573,1.32878813789265,0.159454768657487,1.3109065177259,1.72684981865896,0.723245292907558,15.0791283939272,33.1782467129413,0,0.827810238914197,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0,0.295301892880773,0,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,9.38686832254841,6.35496212591461,0,0.98931751764888,1.93757312035087,0.542816324353403,0.358117032009409,0.328281799490123,2.04036585640896,0,2.39219233116994,0.619160603889667,2.22233432843654,0.753473828018764,1.50363650493128,2.51655990527175,0.169978429993855,0.839708713941948,0.690999869022119,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.87345025498471,0.404593039154462,0.330613822901344,0.785267825952089,0.777689839750757,0,1.12738587736838,0,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.911430693907651,3.25063967719704,2.17425708743405,3.16833006883652,2.21207784439725,0,0.924398614483445,1.94881234466693,0.895133478337407,1.39076948346885,1.80293174279953,1.77227432609493,1.41353029927407,1.5241361331,1.31074040677893,1.8516997340553,2.30908419936791,2.10378423926824,0.680191150845634,1.33191572024439,0.179427713218951,1.67884616364078,0,6.56888664079137,1.83151624267265,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.532427418478012,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0,0,1.16965804222704,0.214871054048298,0.382576664137687,0.220591419119515,0.463735671240843
|short_description=p3@Daxx
}}

Revision as of 14:09, 13 September 2013

Short description:p3@Daxx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Daxx_5end
Coexpression cluster:MCL_coexpression_mm9:1279
Association with transcript: -15bp_to_ENSMUST00000172859_5end
EntrezGene:Daxx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Daxx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G36.35
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system1.37e-1245
blood island1.37e-1245
hemolymphoid system1.63e-1248
immune system1.63e-1248
mixed endoderm/mesoderm-derived structure2.05e-1035
hemopoietic organ3.03e-0929
immune organ3.03e-0929
lateral plate mesoderm1.53e-0887
mesoderm3.97e-08120
mesoderm-derived structure3.97e-08120
presumptive mesoderm3.97e-08120
endoderm-derived structure1.30e-07118
endoderm1.30e-07118
presumptive endoderm1.30e-07118
thymus1.80e-0723
neck1.80e-0723
respiratory system epithelium1.80e-0723
hemolymphoid system gland1.80e-0723
pharyngeal epithelium1.80e-0723
thymic region1.80e-0723
pharyngeal gland1.80e-0723
entire pharyngeal arch endoderm1.80e-0723
thymus primordium1.80e-0723
early pharyngeal endoderm1.80e-0723
pharynx5.46e-0724
gland of gut5.46e-0724
upper respiratory tract5.46e-0724
chordate pharynx5.46e-0724
pharyngeal arch system5.46e-0724
pharyngeal region of foregut5.46e-0724
subdivision of digestive tract6.99e-07114
unilaminar epithelium7.27e-0766







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:34047191..34047206,%2B&oldid=2942494"