FFCP PHASE1:Mm9::chr17:44271679..44271697,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:44271679..44271697,+|id=chr17:44271679..44271697,+|ontology_enrichment_celltype=CL:0002563!3.22e-09!9;CL:0002251!3.22e-09!9;CL:0000239!1.02e-07!6;CL:0000677!1.02e-07!6;CL:0000212!1.02e-07!6;CL:0000584!1.02e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,5.56e-13,6;CL:0000677,5.56e-13,6;CL:0000584,5.56e-13,6;CL:0000075,5.32e-11,7;CL:0002563,6.52e-11,9;CL:0002251,6.52e-11,9;CL:0000066,6.78e-08,25;CL:0000682,4.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.00e-21!43;UBERON:0005409!1.40e-17!59;UBERON:0000344!1.84e-15!15;UBERON:0001242!1.76e-13!13;UBERON:0000060!1.76e-13!13;UBERON:0001262!1.76e-13!13;UBERON:0004786!1.76e-13!13;UBERON:0003350!3.22e-09!9;UBERON:0004808!3.22e-09!9;UBERON:0001277!3.22e-09!9;UBERON:0001007!3.56e-08!128;UBERON:0001555!3.56e-08!128;UBERON:0007026!3.56e-08!128;UBERON:0004119!7.90e-08!130;UBERON:0000925!7.90e-08!130;UBERON:0006595!7.90e-08!130;UBERON:0004923!1.02e-07!24;UBERON:0004921!3.39e-07!126;UBERON:0004185!3.39e-07!126;UBERON:0000485!4.54e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.92e-45,31;UBERON:0005409,1.93e-29,47;UBERON:0000344,4.73e-22,15;UBERON:0001242,1.87e-18,13;UBERON:0001262,1.87e-18,13;UBERON:0004786,1.87e-18,13;UBERON:0004923,1.51e-12,24;UBERON:0003350,6.52e-11,9;UBERON:0004808,6.52e-11,9;UBERON:0001277,6.52e-11,9;UBERON:0001007,2.88e-10,116;UBERON:0001555,2.88e-10,116;UBERON:0007026,2.88e-10,116;UBERON:0004119,5.77e-10,118;UBERON:0000925,5.77e-10,118;UBERON:0006595,5.77e-10,118;UBERON:0002108,3.03e-09,4;UBERON:0000485,1.04e-08,11;UBERON:0004921,1.04e-08,114;UBERON:0000331,2.42e-07,3;UBERON:0002116,2.42e-07,3;UBERON:0001204,2.42e-07,3;UBERON:0001168,2.42e-07,3|phase1_expression=0,28.6159834264276,20.0199665331396,54.4435580352294,62.1110705133471,6.5472916045637,11.9142446703718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,16.6392119705143,15.5998311125676,18.9496548157957,13.7843838770904,17.6686410802429,43.705386474966,32.2598566092711,9.3126814475228,0,0,0,0.577703239502549,1.49611180822643,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,1.07940638327563,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,5.1382745873577,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,30.9103036802396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2236550135373,30.6762657329711,0.426576501070468,0.464473343720877,4.38149368495117,12.9077455758939,16.4559752445204,15.7887269673424,31.7934471234823,12.3524216043008,10.0534083520108,11.1415624343044,10.5280607044325,26.9645822596266,25.0720137854645,25.0918004300503,0,0.228497025219458,2.25415471346161,0.203651327845314,0.775809948670503,0.210407459670956,0.885311519739602,0.885660887877613,1.56998727841375,1.60416313098341,0,0.333690211432188,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0.505157755894224,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1929094402776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.436725127492355,0,0.247960367176008,0,5.57344385154709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33348036680969,0.618105171716683,0,0.758091635291392,0.760437899670719,1.13175804831646,0.468207537349412,0.576226371643824,0.631790158511746,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.588795680537589,0,1.24233064311536,0.238436189947321,0.872078499793971,0.846984423737976,0.338458431566706,1.46342378298218,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.394017929502254,0,1.08455788830176,0.771626443924566,0,1.16965804222704,0.859484216193193,0,0,0|short_description=p@chr17:44271679..44271697,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:44271679..44271697,+ | |||
|id=chr17:44271679..44271697,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.22e-09!9;CL:0002251!3.22e-09!9;CL:0000239!1.02e-07!6;CL:0000677!1.02e-07!6;CL:0000212!1.02e-07!6;CL:0000584!1.02e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.56e-13,6;CL:0000677,5.56e-13,6;CL:0000584,5.56e-13,6;CL:0000075,5.32e-11,7;CL:0002563,6.52e-11,9;CL:0002251,6.52e-11,9;CL:0000066,6.78e-08,25;CL:0000682,4.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.00e-21!43;UBERON:0005409!1.40e-17!59;UBERON:0000344!1.84e-15!15;UBERON:0001242!1.76e-13!13;UBERON:0000060!1.76e-13!13;UBERON:0001262!1.76e-13!13;UBERON:0004786!1.76e-13!13;UBERON:0003350!3.22e-09!9;UBERON:0004808!3.22e-09!9;UBERON:0001277!3.22e-09!9;UBERON:0001007!3.56e-08!128;UBERON:0001555!3.56e-08!128;UBERON:0007026!3.56e-08!128;UBERON:0004119!7.90e-08!130;UBERON:0000925!7.90e-08!130;UBERON:0006595!7.90e-08!130;UBERON:0004923!1.02e-07!24;UBERON:0004921!3.39e-07!126;UBERON:0004185!3.39e-07!126;UBERON:0000485!4.54e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.92e-45,31;UBERON:0005409,1.93e-29,47;UBERON:0000344,4.73e-22,15;UBERON:0001242,1.87e-18,13;UBERON:0001262,1.87e-18,13;UBERON:0004786,1.87e-18,13;UBERON:0004923,1.51e-12,24;UBERON:0003350,6.52e-11,9;UBERON:0004808,6.52e-11,9;UBERON:0001277,6.52e-11,9;UBERON:0001007,2.88e-10,116;UBERON:0001555,2.88e-10,116;UBERON:0007026,2.88e-10,116;UBERON:0004119,5.77e-10,118;UBERON:0000925,5.77e-10,118;UBERON:0006595,5.77e-10,118;UBERON:0002108,3.03e-09,4;UBERON:0000485,1.04e-08,11;UBERON:0004921,1.04e-08,114;UBERON:0000331,2.42e-07,3;UBERON:0002116,2.42e-07,3;UBERON:0001204,2.42e-07,3;UBERON:0001168,2.42e-07,3 | |||
|phase1_expression=0,28.6159834264276,20.0199665331396,54.4435580352294,62.1110705133471,6.5472916045637,11.9142446703718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,16.6392119705143,15.5998311125676,18.9496548157957,13.7843838770904,17.6686410802429,43.705386474966,32.2598566092711,9.3126814475228,0,0,0,0.577703239502549,1.49611180822643,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,1.07940638327563,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,5.1382745873577,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,30.9103036802396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2236550135373,30.6762657329711,0.426576501070468,0.464473343720877,4.38149368495117,12.9077455758939,16.4559752445204,15.7887269673424,31.7934471234823,12.3524216043008,10.0534083520108,11.1415624343044,10.5280607044325,26.9645822596266,25.0720137854645,25.0918004300503,0,0.228497025219458,2.25415471346161,0.203651327845314,0.775809948670503,0.210407459670956,0.885311519739602,0.885660887877613,1.56998727841375,1.60416313098341,0,0.333690211432188,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0.505157755894224,0,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1929094402776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.436725127492355,0,0.247960367176008,0,5.57344385154709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33348036680969,0.618105171716683,0,0.758091635291392,0.760437899670719,1.13175804831646,0.468207537349412,0.576226371643824,0.631790158511746,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.588795680537589,0,1.24233064311536,0.238436189947321,0.872078499793971,0.846984423737976,0.338458431566706,1.46342378298218,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.394017929502254,0,1.08455788830176,0.771626443924566,0,1.16965804222704,0.859484216193193,0,0,0 | |||
|short_description=p@chr17:44271679..44271697,+ | |||
}} |
Revision as of 14:35, 13 September 2013
Short description: | p@chr17:44271679..44271697, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:44271679..44271697, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.56e-13 | 6 |
gut absorptive cell | 5.56e-13 | 6 |
enterocyte | 5.56e-13 | 6 |
columnar/cuboidal epithelial cell | 5.32e-11 | 7 |
intestinal epithelial cell | 6.52e-11 | 9 |
epithelial cell of alimentary canal | 6.52e-11 | 9 |
epithelial cell | 6.78e-08 | 25 |
M cell of gut | 4.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.92e-45 | 31 |
gastrointestinal system | 1.93e-29 | 47 |
mucosa | 4.73e-22 | 15 |
intestinal mucosa | 1.87e-18 | 13 |
wall of intestine | 1.87e-18 | 13 |
gastrointestinal system mucosa | 1.87e-18 | 13 |
organ component layer | 1.51e-12 | 24 |
epithelium of mucosa | 6.52e-11 | 9 |
gastrointestinal system epithelium | 6.52e-11 | 9 |
intestinal epithelium | 6.52e-11 | 9 |
digestive system | 2.88e-10 | 116 |
digestive tract | 2.88e-10 | 116 |
primitive gut | 2.88e-10 | 116 |
endoderm-derived structure | 5.77e-10 | 118 |
endoderm | 5.77e-10 | 118 |
presumptive endoderm | 5.77e-10 | 118 |
small intestine | 3.03e-09 | 4 |
simple columnar epithelium | 1.04e-08 | 11 |
subdivision of digestive tract | 1.04e-08 | 114 |
ileal mucosa | 2.42e-07 | 3 |
ileum | 2.42e-07 | 3 |
mucosa of small intestine | 2.42e-07 | 3 |
wall of small intestine | 2.42e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.