FFCP PHASE1:Mm9::chr17:57201948..57201965,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224912|HGNC=|MCL_coexpression_id=12|UniProt=E9PZ04|association_with_transcript=17bp_to_ENSMUST00000163628_5end|description=CAGE_peak_3_at_Crb3_5end|id=chr17:57201948..57201965,+|ontology_enrichment_celltype=CL:0000066!1.65e-07!25;CL:0002563!4.81e-07!9;CL:0002251!4.81e-07!9;CL:0000223!8.70e-07!20|ontology_enrichment_celltype_v019_2=CL:0002563,4.07e-10,9;CL:0002251,4.07e-10,9;CL:0000066,6.83e-10,25;CL:0000239,1.24e-08,6;CL:0000677,1.24e-08,6;CL:0000584,1.24e-08,6;CL:0000223,3.81e-08,20;CL:0000075,3.37e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.79e-25!128;UBERON:0001555!3.79e-25!128;UBERON:0007026!3.79e-25!128;UBERON:0004119!7.06e-25!130;UBERON:0000925!7.06e-25!130;UBERON:0006595!7.06e-25!130;UBERON:0004921!1.29e-23!126;UBERON:0004185!1.29e-23!126;UBERON:0000160!3.18e-21!43;UBERON:0005409!9.23e-21!59;UBERON:0009569!6.32e-14!66;UBERON:0005177!9.06e-13!85;UBERON:0000344!1.02e-11!15;UBERON:0009854!1.38e-10!23;UBERON:0009856!1.38e-10!23;UBERON:0001242!3.33e-10!13;UBERON:0000060!3.33e-10!13;UBERON:0001262!3.33e-10!13;UBERON:0004786!3.33e-10!13;UBERON:0002107!5.01e-10!22;UBERON:0007499!5.01e-10!22;UBERON:0006925!5.01e-10!22;UBERON:0009497!5.01e-10!22;UBERON:0000015!5.01e-10!22;UBERON:0002423!5.01e-10!22;UBERON:0006235!5.01e-10!22;UBERON:0008835!5.01e-10!22;UBERON:0003894!5.01e-10!22;UBERON:0004161!5.01e-10!22;UBERON:0008836!5.01e-10!22;UBERON:0005172!1.96e-09!49;UBERON:0005173!1.96e-09!49;UBERON:0002417!1.96e-09!49;UBERON:0000916!1.96e-09!49;UBERON:0000466!7.11e-09!79;UBERON:0002100!9.71e-09!98;UBERON:0002365!1.26e-08!25;UBERON:0002330!1.26e-08!25;UBERON:0000481!2.27e-08!230;UBERON:0005911!3.29e-07!69;UBERON:0003350!4.81e-07!9;UBERON:0004808!4.81e-07!9;UBERON:0001277!4.81e-07!9;UBERON:0004923!5.69e-07!24;UBERON:0001041!5.76e-07!92;UBERON:0000077!8.73e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-31,31;UBERON:0005409,8.68e-27,47;UBERON:0001007,1.16e-21,116;UBERON:0001555,1.16e-21,116;UBERON:0007026,1.16e-21,116;UBERON:0004119,5.38e-21,118;UBERON:0000925,5.38e-21,118;UBERON:0006595,5.38e-21,118;UBERON:0004921,7.91e-20,114;UBERON:0000344,2.15e-17,15;UBERON:0001242,4.96e-15,13;UBERON:0001262,4.96e-15,13;UBERON:0004786,4.96e-15,13;UBERON:0004923,1.94e-10,24;UBERON:0003350,4.07e-10,9;UBERON:0004808,4.07e-10,9;UBERON:0001277,4.07e-10,9;UBERON:0009854,2.78e-09,23;UBERON:0009856,2.78e-09,23;UBERON:0002107,1.59e-08,22;UBERON:0007499,1.59e-08,22;UBERON:0006925,1.59e-08,22;UBERON:0009497,1.59e-08,22;UBERON:0000015,1.59e-08,22;UBERON:0002423,1.59e-08,22;UBERON:0006235,1.59e-08,22;UBERON:0008835,1.59e-08,22;UBERON:0003894,1.59e-08,22;UBERON:0004161,1.59e-08,22;UBERON:0008836,1.59e-08,22;UBERON:0005177,4.80e-08,79;UBERON:0000485,7.58e-08,11;UBERON:0002365,5.15e-07,25;UBERON:0002330,5.15e-07,25;UBERON:0005172,7.79e-07,49;UBERON:0005173,7.79e-07,49;UBERON:0002417,7.79e-07,49;UBERON:0000916,7.79e-07,49|phase1_expression=0,19.5426228278042,24.5699589270349,20.8700305801713,30.0537437967808,8.2260843236826,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,13.4393635146462,14.4527847072317,29.860062133981,17.6612418425221,16.1603424514417,23.5629040125904,18.3981994724749,13.7472916606289,0,0,0,1.44425809875637,1.49611180822643,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,3.44169550792555,5.439770669662,3.77792234146472,1.94932925234301,0.896053774194671,1.54488862144927,0,0,0,0,0,0,0,1.08245520505607,0.253359865475099,0.505524445014783,2.96878087269556,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0.125666591329675,4.44950941921873,0,0,0,0,0,3.72783522436244,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.505445516867349,0,0.260240885925407,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,20.1555457620117,13.4869788998408,1.06644125267617,0.928946687441754,4.25262622362908,6.25218926332362,6.22658522765637,9.70150693174052,11.8632265386128,12.0230236948528,10.304743560811,7.36138946552258,5.8489226135736,10.7858329038507,8.42938394511308,9.35963984295526,0.948339504765408,1.71372768914593,6.76246414038483,1.62921062276251,3.49114476901726,1.8936671370386,2.78240763346732,1.91893192373483,2.35498091762062,2.83813477020141,5.63259991465583,0.667380422864376,0.589676985339609,0.674586337154561,0.608580364165509,1.4470629585145,2.03700681425136,2.30156909960649,2.10775794807546,3.29473695825698,11.5014565221884,1.86070473834252,0.936113019343682,2.02063102357689,2.33216637578486,3.85954817090694,0.739012760666419,0.37898282354097,0.814824882210129,0.339490171550376,1.87752198630802,2.84760637651087,2.38043640886014,2.53673742215138,0.945810864637146,0.664394068946325,0.797273843287435,0.655453258862952,0.863424909329478,0.723245292907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| ||
|EntrezGene=224912 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=E9PZ04 | |||
|association_with_transcript=17bp_to_ENSMUST00000163628_5end | |||
|description=CAGE_peak_3_at_Crb3_5end | |||
|id=chr17:57201948..57201965,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.65e-07!25;CL:0002563!4.81e-07!9;CL:0002251!4.81e-07!9;CL:0000223!8.70e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.07e-10,9;CL:0002251,4.07e-10,9;CL:0000066,6.83e-10,25;CL:0000239,1.24e-08,6;CL:0000677,1.24e-08,6;CL:0000584,1.24e-08,6;CL:0000223,3.81e-08,20;CL:0000075,3.37e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.79e-25!128;UBERON:0001555!3.79e-25!128;UBERON:0007026!3.79e-25!128;UBERON:0004119!7.06e-25!130;UBERON:0000925!7.06e-25!130;UBERON:0006595!7.06e-25!130;UBERON:0004921!1.29e-23!126;UBERON:0004185!1.29e-23!126;UBERON:0000160!3.18e-21!43;UBERON:0005409!9.23e-21!59;UBERON:0009569!6.32e-14!66;UBERON:0005177!9.06e-13!85;UBERON:0000344!1.02e-11!15;UBERON:0009854!1.38e-10!23;UBERON:0009856!1.38e-10!23;UBERON:0001242!3.33e-10!13;UBERON:0000060!3.33e-10!13;UBERON:0001262!3.33e-10!13;UBERON:0004786!3.33e-10!13;UBERON:0002107!5.01e-10!22;UBERON:0007499!5.01e-10!22;UBERON:0006925!5.01e-10!22;UBERON:0009497!5.01e-10!22;UBERON:0000015!5.01e-10!22;UBERON:0002423!5.01e-10!22;UBERON:0006235!5.01e-10!22;UBERON:0008835!5.01e-10!22;UBERON:0003894!5.01e-10!22;UBERON:0004161!5.01e-10!22;UBERON:0008836!5.01e-10!22;UBERON:0005172!1.96e-09!49;UBERON:0005173!1.96e-09!49;UBERON:0002417!1.96e-09!49;UBERON:0000916!1.96e-09!49;UBERON:0000466!7.11e-09!79;UBERON:0002100!9.71e-09!98;UBERON:0002365!1.26e-08!25;UBERON:0002330!1.26e-08!25;UBERON:0000481!2.27e-08!230;UBERON:0005911!3.29e-07!69;UBERON:0003350!4.81e-07!9;UBERON:0004808!4.81e-07!9;UBERON:0001277!4.81e-07!9;UBERON:0004923!5.69e-07!24;UBERON:0001041!5.76e-07!92;UBERON:0000077!8.73e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-31,31;UBERON:0005409,8.68e-27,47;UBERON:0001007,1.16e-21,116;UBERON:0001555,1.16e-21,116;UBERON:0007026,1.16e-21,116;UBERON:0004119,5.38e-21,118;UBERON:0000925,5.38e-21,118;UBERON:0006595,5.38e-21,118;UBERON:0004921,7.91e-20,114;UBERON:0000344,2.15e-17,15;UBERON:0001242,4.96e-15,13;UBERON:0001262,4.96e-15,13;UBERON:0004786,4.96e-15,13;UBERON:0004923,1.94e-10,24;UBERON:0003350,4.07e-10,9;UBERON:0004808,4.07e-10,9;UBERON:0001277,4.07e-10,9;UBERON:0009854,2.78e-09,23;UBERON:0009856,2.78e-09,23;UBERON:0002107,1.59e-08,22;UBERON:0007499,1.59e-08,22;UBERON:0006925,1.59e-08,22;UBERON:0009497,1.59e-08,22;UBERON:0000015,1.59e-08,22;UBERON:0002423,1.59e-08,22;UBERON:0006235,1.59e-08,22;UBERON:0008835,1.59e-08,22;UBERON:0003894,1.59e-08,22;UBERON:0004161,1.59e-08,22;UBERON:0008836,1.59e-08,22;UBERON:0005177,4.80e-08,79;UBERON:0000485,7.58e-08,11;UBERON:0002365,5.15e-07,25;UBERON:0002330,5.15e-07,25;UBERON:0005172,7.79e-07,49;UBERON:0005173,7.79e-07,49;UBERON:0002417,7.79e-07,49;UBERON:0000916,7.79e-07,49 | |||
|phase1_expression=0,19.5426228278042,24.5699589270349,20.8700305801713,30.0537437967808,8.2260843236826,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,13.4393635146462,14.4527847072317,29.860062133981,17.6612418425221,16.1603424514417,23.5629040125904,18.3981994724749,13.7472916606289,0,0,0,1.44425809875637,1.49611180822643,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,3.44169550792555,5.439770669662,3.77792234146472,1.94932925234301,0.896053774194671,1.54488862144927,0,0,0,0,0,0,0,1.08245520505607,0.253359865475099,0.505524445014783,2.96878087269556,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0.125666591329675,4.44950941921873,0,0,0,0,0,3.72783522436244,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.505445516867349,0,0.260240885925407,0.229902104433473,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,20.1555457620117,13.4869788998408,1.06644125267617,0.928946687441754,4.25262622362908,6.25218926332362,6.22658522765637,9.70150693174052,11.8632265386128,12.0230236948528,10.304743560811,7.36138946552258,5.8489226135736,10.7858329038507,8.42938394511308,9.35963984295526,0.948339504765408,1.71372768914593,6.76246414038483,1.62921062276251,3.49114476901726,1.8936671370386,2.78240763346732,1.91893192373483,2.35498091762062,2.83813477020141,5.63259991465583,0.667380422864376,0.589676985339609,0.674586337154561,0.608580364165509,1.4470629585145,2.03700681425136,2.30156909960649,2.10775794807546,3.29473695825698,11.5014565221884,1.86070473834252,0.936113019343682,2.02063102357689,2.33216637578486,3.85954817090694,0.739012760666419,0.37898282354097,0.814824882210129,0.339490171550376,1.87752198630802,2.84760637651087,2.38043640886014,2.53673742215138,0.945810864637146,0.664394068946325,0.797273843287435,0.655453258862952,0.863424909329478,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.325773918707152,0.329940245945071,0,2.18502572539483,2.41858845571801,1.88605079755898,2.06711325016541,2.45948118355142,3.35956781118687,1.45413491791002,0,0.948110273807448,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0,0,0,0,10.4933101186746,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.316335993581135,1.62655573701479,1.83609079397062,0.627264888043406,1.31017538247707,0.944050424693745,1.07449492442937,2.09404753587224,6.99920855775682,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.750729901804728,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,0.824140228955577,0.64183841918363,0,0.760437899670719,0.565879024158229,0.655490552289177,0.384150914429216,0.516919220600519,0.476293691283074,0.927074607558844,0.38581844092741,0.412085900803307,0.294397840268795,0,1.06485483695602,0.953744759789284,1.16277133305863,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0,0.949080144993393,0.591026894253381,0,1.39443157067369,0.578719832943424,0,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p3@Crb3 | |||
}} |
Revision as of 15:01, 13 September 2013
Short description: | p3@Crb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Crb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 17bp_to_ENSMUST00000163628_5end |
EntrezGene: | Crb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.07e-10 | 9 |
epithelial cell of alimentary canal | 4.07e-10 | 9 |
epithelial cell | 6.83e-10 | 25 |
brush border epithelial cell | 1.24e-08 | 6 |
gut absorptive cell | 1.24e-08 | 6 |
enterocyte | 1.24e-08 | 6 |
endodermal cell | 3.81e-08 | 20 |
columnar/cuboidal epithelial cell | 3.37e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.