FFCP PHASE1:Mm9::chr17:57221131..57221148,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:57221131..57221148,-|id=chr17:57221131..57221148,-|ontology_enrichment_celltype=CL:0000117!1.90e-24!23;CL:0000337!1.90e-24!23;CL:0000540!1.83e-20!33;CL:0000047!1.83e-20!33;CL:0000031!1.83e-20!33;CL:0000404!1.83e-20!33;CL:0002319!2.02e-20!43;CL:0000221!1.03e-19!44;CL:0000133!1.03e-19!44;CL:0000055!4.31e-16!50;CL:0000393!6.46e-16!39;CL:0000211!6.46e-16!39;CL:0002321!1.02e-08!70;CL:0000220!1.02e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,8.29e-24,23;CL:0000337,8.29e-24,23;CL:0000540,1.34e-15,33;CL:0000047,1.34e-15,33;CL:0000031,1.34e-15,33;CL:0000404,1.34e-15,33;CL:0002319,5.01e-13,43;CL:0000393,1.06e-12,39;CL:0000211,1.06e-12,39;CL:0000221,1.19e-12,44;CL:0000133,1.19e-12,44;CL:0002610,5.81e-10,3;CL:0002613,2.91e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.43e-43!73;UBERON:0005743!8.43e-43!73;UBERON:0000073!1.12e-42!75;UBERON:0001016!1.12e-42!75;UBERON:0001049!2.56e-36!52;UBERON:0005068!2.56e-36!52;UBERON:0006241!2.56e-36!52;UBERON:0007135!2.56e-36!52;UBERON:0000955!2.11e-34!50;UBERON:0006238!2.11e-34!50;UBERON:0002616!1.37e-33!49;UBERON:0004121!3.24e-33!102;UBERON:0000924!3.24e-33!102;UBERON:0006601!3.24e-33!102;UBERON:0002346!1.31e-32!71;UBERON:0003075!1.31e-32!71;UBERON:0007284!1.31e-32!71;UBERON:0002020!5.87e-31!34;UBERON:0000033!6.60e-28!63;UBERON:0003080!9.56e-26!40;UBERON:0002791!1.38e-25!29;UBERON:0003528!1.38e-25!29;UBERON:0001893!1.38e-25!29;UBERON:0002780!1.03e-24!39;UBERON:0001890!1.03e-24!39;UBERON:0006240!1.03e-24!39;UBERON:0003056!1.93e-22!49;UBERON:0000956!7.78e-20!21;UBERON:0001869!7.78e-20!21;UBERON:0000203!7.78e-20!21;UBERON:0007811!1.47e-16!86;UBERON:0002619!2.86e-16!17;UBERON:0000153!5.74e-14!94;UBERON:0002021!4.85e-13!10;UBERON:0000411!4.85e-13!10;UBERON:0001950!4.85e-13!10;UBERON:0000025!1.95e-11!114;UBERON:0003076!1.10e-10!12;UBERON:0003057!1.10e-10!12;UBERON:0004111!8.77e-10!122;UBERON:0002298!1.05e-07!6;UBERON:0002240!1.75e-07!6;UBERON:0005174!1.75e-07!6;UBERON:0001137!1.75e-07!6;UBERON:0002420!6.81e-07!8;UBERON:0007245!6.81e-07!8;UBERON:0010009!6.81e-07!8;UBERON:0010011!6.81e-07!8;UBERON:0000454!6.81e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-38,54;UBERON:0001017,6.16e-36,73;UBERON:0001016,8.01e-35,75;UBERON:0001049,2.11e-33,52;UBERON:0005068,2.11e-33,52;UBERON:0006241,2.11e-33,52;UBERON:0007135,2.11e-33,52;UBERON:0002020,9.78e-29,34;UBERON:0002021,2.40e-27,10;UBERON:0000411,2.40e-27,10;UBERON:0001950,2.40e-27,10;UBERON:0004121,2.97e-26,95;UBERON:0000924,2.97e-26,95;UBERON:0006601,2.97e-26,95;UBERON:0002346,4.18e-26,64;UBERON:0003075,4.18e-26,64;UBERON:0007284,4.18e-26,64;UBERON:0002616,9.10e-25,46;UBERON:0000955,3.88e-24,47;UBERON:0006238,3.88e-24,47;UBERON:0010371,3.34e-22,73;UBERON:0003528,8.29e-22,29;UBERON:0002791,8.29e-22,29;UBERON:0001893,8.29e-22,29;UBERON:0003080,2.40e-21,40;UBERON:0002780,1.15e-19,39;UBERON:0001890,1.15e-19,39;UBERON:0006240,1.15e-19,39;UBERON:0003056,1.21e-16,49;UBERON:0010314,1.83e-16,92;UBERON:0002619,2.86e-15,17;UBERON:0000956,1.44e-14,21;UBERON:0001869,1.44e-14,21;UBERON:0000203,1.44e-14,21;UBERON:0003076,8.89e-13,12;UBERON:0003057,8.89e-13,12;UBERON:0000025,3.35e-12,114;UBERON:0004111,4.96e-11,122;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0004684,5.81e-10,3;UBERON:0002275,5.81e-10,3;UBERON:0011216,9.64e-10,194;UBERON:0001948,1.72e-08,5;UBERON:0002315,1.72e-08,5;UBERON:0002420,1.73e-08,8;UBERON:0007245,1.73e-08,8;UBERON:0010009,1.73e-08,8;UBERON:0010011,1.73e-08,8;UBERON:0000454,1.73e-08,8;UBERON:0002950,4.51e-07,4;UBERON:0001891,4.51e-07,4;UBERON:0009616,4.51e-07,4;UBERON:0010286,4.51e-07,4|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0,0,0,0,0,0.898800331555214,3.84218305321555,0.414758449233911,2.8351247049655,0.420649922702764,2.57085885963423,2.42955395046775,0.244981598429908,0.958454710182364,0.919218786610021,5.50579404996943,5.36286819957788,4.91540906419979,1.18697658957174,2.8361169516747,1.04182674111352,11.725685958058,0.56276261003168,4.5839474333043,1.47314292736834,0.996601765593721,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,3.77004072264219,0,0,0,0,1.49790639404823,0,0.125654352112864,0.869121600961382,0.255715457330331,2.49345653471472,1.78465389374533,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:57221131..57221148,- | |||
|id=chr17:57221131..57221148,- | |||
|ontology_enrichment_celltype=CL:0000117!1.90e-24!23;CL:0000337!1.90e-24!23;CL:0000540!1.83e-20!33;CL:0000047!1.83e-20!33;CL:0000031!1.83e-20!33;CL:0000404!1.83e-20!33;CL:0002319!2.02e-20!43;CL:0000221!1.03e-19!44;CL:0000133!1.03e-19!44;CL:0000055!4.31e-16!50;CL:0000393!6.46e-16!39;CL:0000211!6.46e-16!39;CL:0002321!1.02e-08!70;CL:0000220!1.02e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.29e-24,23;CL:0000337,8.29e-24,23;CL:0000540,1.34e-15,33;CL:0000047,1.34e-15,33;CL:0000031,1.34e-15,33;CL:0000404,1.34e-15,33;CL:0002319,5.01e-13,43;CL:0000393,1.06e-12,39;CL:0000211,1.06e-12,39;CL:0000221,1.19e-12,44;CL:0000133,1.19e-12,44;CL:0002610,5.81e-10,3;CL:0002613,2.91e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.43e-43!73;UBERON:0005743!8.43e-43!73;UBERON:0000073!1.12e-42!75;UBERON:0001016!1.12e-42!75;UBERON:0001049!2.56e-36!52;UBERON:0005068!2.56e-36!52;UBERON:0006241!2.56e-36!52;UBERON:0007135!2.56e-36!52;UBERON:0000955!2.11e-34!50;UBERON:0006238!2.11e-34!50;UBERON:0002616!1.37e-33!49;UBERON:0004121!3.24e-33!102;UBERON:0000924!3.24e-33!102;UBERON:0006601!3.24e-33!102;UBERON:0002346!1.31e-32!71;UBERON:0003075!1.31e-32!71;UBERON:0007284!1.31e-32!71;UBERON:0002020!5.87e-31!34;UBERON:0000033!6.60e-28!63;UBERON:0003080!9.56e-26!40;UBERON:0002791!1.38e-25!29;UBERON:0003528!1.38e-25!29;UBERON:0001893!1.38e-25!29;UBERON:0002780!1.03e-24!39;UBERON:0001890!1.03e-24!39;UBERON:0006240!1.03e-24!39;UBERON:0003056!1.93e-22!49;UBERON:0000956!7.78e-20!21;UBERON:0001869!7.78e-20!21;UBERON:0000203!7.78e-20!21;UBERON:0007811!1.47e-16!86;UBERON:0002619!2.86e-16!17;UBERON:0000153!5.74e-14!94;UBERON:0002021!4.85e-13!10;UBERON:0000411!4.85e-13!10;UBERON:0001950!4.85e-13!10;UBERON:0000025!1.95e-11!114;UBERON:0003076!1.10e-10!12;UBERON:0003057!1.10e-10!12;UBERON:0004111!8.77e-10!122;UBERON:0002298!1.05e-07!6;UBERON:0002240!1.75e-07!6;UBERON:0005174!1.75e-07!6;UBERON:0001137!1.75e-07!6;UBERON:0002420!6.81e-07!8;UBERON:0007245!6.81e-07!8;UBERON:0010009!6.81e-07!8;UBERON:0010011!6.81e-07!8;UBERON:0000454!6.81e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-38,54;UBERON:0001017,6.16e-36,73;UBERON:0001016,8.01e-35,75;UBERON:0001049,2.11e-33,52;UBERON:0005068,2.11e-33,52;UBERON:0006241,2.11e-33,52;UBERON:0007135,2.11e-33,52;UBERON:0002020,9.78e-29,34;UBERON:0002021,2.40e-27,10;UBERON:0000411,2.40e-27,10;UBERON:0001950,2.40e-27,10;UBERON:0004121,2.97e-26,95;UBERON:0000924,2.97e-26,95;UBERON:0006601,2.97e-26,95;UBERON:0002346,4.18e-26,64;UBERON:0003075,4.18e-26,64;UBERON:0007284,4.18e-26,64;UBERON:0002616,9.10e-25,46;UBERON:0000955,3.88e-24,47;UBERON:0006238,3.88e-24,47;UBERON:0010371,3.34e-22,73;UBERON:0003528,8.29e-22,29;UBERON:0002791,8.29e-22,29;UBERON:0001893,8.29e-22,29;UBERON:0003080,2.40e-21,40;UBERON:0002780,1.15e-19,39;UBERON:0001890,1.15e-19,39;UBERON:0006240,1.15e-19,39;UBERON:0003056,1.21e-16,49;UBERON:0010314,1.83e-16,92;UBERON:0002619,2.86e-15,17;UBERON:0000956,1.44e-14,21;UBERON:0001869,1.44e-14,21;UBERON:0000203,1.44e-14,21;UBERON:0003076,8.89e-13,12;UBERON:0003057,8.89e-13,12;UBERON:0000025,3.35e-12,114;UBERON:0004111,4.96e-11,122;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0004684,5.81e-10,3;UBERON:0002275,5.81e-10,3;UBERON:0011216,9.64e-10,194;UBERON:0001948,1.72e-08,5;UBERON:0002315,1.72e-08,5;UBERON:0002420,1.73e-08,8;UBERON:0007245,1.73e-08,8;UBERON:0010009,1.73e-08,8;UBERON:0010011,1.73e-08,8;UBERON:0000454,1.73e-08,8;UBERON:0002950,4.51e-07,4;UBERON:0001891,4.51e-07,4;UBERON:0009616,4.51e-07,4;UBERON:0010286,4.51e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0.633831403506179,0,0,0,0,0,0.898800331555214,3.84218305321555,0.414758449233911,2.8351247049655,0.420649922702764,2.57085885963423,2.42955395046775,0.244981598429908,0.958454710182364,0.919218786610021,5.50579404996943,5.36286819957788,4.91540906419979,1.18697658957174,2.8361169516747,1.04182674111352,11.725685958058,0.56276261003168,4.5839474333043,1.47314292736834,0.996601765593721,1.1183966749518,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,3.77004072264219,0,0,0,0,1.49790639404823,0,0.125654352112864,0.869121600961382,0.255715457330331,2.49345653471472,1.78465389374533,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.44495530989013,1.64096361229084,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,1.6942555278512,3.22227665555024,5.15605962095457,5.15559547031063,2.74033007908257,7.55393897389701,4.72515750162264,4.05289082901798,2.26571204492102,2.5888015587591,0,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.38581844092741,0,0,0,0,0,0,0,0,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:57221131..57221148,- | |||
}} |
Revision as of 15:02, 13 September 2013
Short description: | p@chr17:57221131..57221148, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57221131..57221148, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.29e-24 | 23 |
neuroblast (sensu Vertebrata) | 8.29e-24 | 23 |
neuron | 1.34e-15 | 33 |
neuronal stem cell | 1.34e-15 | 33 |
neuroblast | 1.34e-15 | 33 |
electrically signaling cell | 1.34e-15 | 33 |
neural cell | 5.01e-13 | 43 |
electrically responsive cell | 1.06e-12 | 39 |
electrically active cell | 1.06e-12 | 39 |
ectodermal cell | 1.19e-12 | 44 |
neurectodermal cell | 1.19e-12 | 44 |
raphe nuclei neuron | 5.81e-10 | 3 |
striatum neuron | 2.91e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.