FFCP PHASE1:Hg19::chr5:73936195..73936201,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8507|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3345|TSSclassifier=N|UniProt=O14682|association_with_transcript=315bp_to_AF059611_5end|coexpression_cluster_id=C4519|description=CAGE_peak_19_at_ENC1_5end|id=chr5:73936195..73936201,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;1.53e-15;3!CL:0000540;1.58e-08;6!CL:0000404;1.58e-08;6!CL:0002589;9.01e-07;2|ontology_enrichment_celltype_v019_2=CL:0002615,1.91e-15,3;CL:0000540,1.67e-08,6;CL:0000031,1.67e-08,6;CL:0000404,1.67e-08,6;CL:0002589,7.61e-07,2|ontology_enrichment_development_v019=CL:0000031;1.58e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!1.07e-23!32;UBERON:0001893!2.34e-23!34;UBERON:0000956!1.12e-22!25;UBERON:0000203!1.12e-22!25;UBERON:0002791!3.23e-22!33;UBERON:0002020!7.46e-20!34;UBERON:0003528!7.46e-20!34;UBERON:0001950!5.46e-19!20;UBERON:0002619!5.56e-19!22;UBERON:0002780!6.62e-18!41;UBERON:0001890!6.62e-18!41;UBERON:0006240!6.62e-18!41;UBERON:0003080!2.81e-17!42;UBERON:0001017!1.96e-15!82;UBERON:0005743!3.61e-14!86;UBERON:0001049!1.22e-13!57;UBERON:0005068!1.22e-13!57;UBERON:0006241!1.22e-13!57;UBERON:0007135!1.22e-13!57;UBERON:0000073!1.84e-12!94;UBERON:0001016!1.84e-12!94;UBERON:0003056!2.63e-12!61;UBERON:0002616!7.07e-12!59;UBERON:0000955!1.83e-11!69;UBERON:0006238!1.83e-11!69;UBERON:0003075!1.74e-10!86;UBERON:0007284!1.74e-10!86;UBERON:0002346!1.40e-09!90;UBERON:0000200!8.40e-09!6;UBERON:0001871!9.91e-09!7;UBERON:0000153!1.76e-07!129;UBERON:0007811!1.76e-07!129;UBERON:0000025!3.76e-07!194;UBERON:0000033!3.81e-07!123;UBERON:0004121!6.60e-07!169|ontology_enrichment_uberon_v019=UBERON:0001871;2.91e-15;6!UBERON:0000956;4.38e-15;25!UBERON:0000203;4.38e-15;25!UBERON:0001950;2.81e-13;20!UBERON:0002619;4.07e-12;22!UBERON:0002791;5.84e-12;32!UBERON:0001869;5.84e-12;32!UBERON:0001893;8.80e-10;34!UBERON:0002021;1.06e-09;5!UBERON:0003528;3.16e-09;34!UBERON:0002020;3.16e-09;34!UBERON:0003688;3.13e-08;6!UBERON:0002358;3.13e-08;6!UBERON:0003684;3.13e-08;6!UBERON:0001178;3.13e-08;6!UBERON:0001017;5.45e-08;75!UBERON:0002771;4.82e-07;2!UBERON:0001876;5.89e-07;2!UBERON:0002360;9.01e-07;2!UBERON:0000094;9.01e-07;2!UBERON:0001529;9.01e-07;2!UBERON:0007204;9.01e-07;2!UBERON:0010743;9.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.71e-15,6;UBERON:0000956,4.44e-15,25;UBERON:0000203,4.44e-15,25;UBERON:0001017,9.59e-15,81;UBERON:0001950,2.93e-13,20;UBERON:0001016,3.74e-13,89;UBERON:0002619,4.22e-12,22;UBERON:0002791,8.33e-12,32;UBERON:0001869,8.33e-12,32;UBERON:0003528,4.14e-11,34;UBERON:0002020,4.14e-11,34;UBERON:0001893,4.14e-11,34;UBERON:0002021,1.21e-09,5;UBERON:0000955,2.78e-09,68;UBERON:0006238,2.78e-09,68;UBERON:0002780,3.41e-09,41;UBERON:0001890,3.41e-09,41;UBERON:0003080,3.41e-09,41;UBERON:0006240,3.41e-09,41;UBERON:0003688,3.50e-08,6;UBERON:0002358,3.50e-08,6;UBERON:0003684,3.50e-08,6;UBERON:0001178,3.50e-08,6;UBERON:0000073,4.66e-07,53;UBERON:0002616,4.66e-07,53;UBERON:0002771,5.11e-07,2;UBERON:0001876,5.41e-07,2;UBERON:0002360,6.80e-07,2;UBERON:0000094,6.80e-07,2;UBERON:0010743,6.80e-07,2;UBERON:0001529,7.61e-07,2;UBERON:0007204,7.61e-07,2|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0,0.572471974262113,1.23186982565596,0.376627918784408,0.0764134057479513,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41151501647669,0,0.799783929456456,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.646882724578552,0,0.254094624222463,0,2.31986643833309,0.502548796003046,3.18969375826582,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3345 | |||
|TSSclassifier=N | |||
|UniProt=O14682 | |||
|association_with_transcript=315bp_to_AF059611_5end | |||
|coexpression_cluster_id=C4519 | |||
|description=CAGE_peak_19_at_ENC1_5end | |||
|id=chr5:73936195..73936201,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.53e-15;3!CL:0000540;1.58e-08;6!CL:0000404;1.58e-08;6!CL:0002589;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.91e-15,3;CL:0000540,1.67e-08,6;CL:0000031,1.67e-08,6;CL:0000404,1.67e-08,6;CL:0002589,7.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.58e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.07e-23!32;UBERON:0001893!2.34e-23!34;UBERON:0000956!1.12e-22!25;UBERON:0000203!1.12e-22!25;UBERON:0002791!3.23e-22!33;UBERON:0002020!7.46e-20!34;UBERON:0003528!7.46e-20!34;UBERON:0001950!5.46e-19!20;UBERON:0002619!5.56e-19!22;UBERON:0002780!6.62e-18!41;UBERON:0001890!6.62e-18!41;UBERON:0006240!6.62e-18!41;UBERON:0003080!2.81e-17!42;UBERON:0001017!1.96e-15!82;UBERON:0005743!3.61e-14!86;UBERON:0001049!1.22e-13!57;UBERON:0005068!1.22e-13!57;UBERON:0006241!1.22e-13!57;UBERON:0007135!1.22e-13!57;UBERON:0000073!1.84e-12!94;UBERON:0001016!1.84e-12!94;UBERON:0003056!2.63e-12!61;UBERON:0002616!7.07e-12!59;UBERON:0000955!1.83e-11!69;UBERON:0006238!1.83e-11!69;UBERON:0003075!1.74e-10!86;UBERON:0007284!1.74e-10!86;UBERON:0002346!1.40e-09!90;UBERON:0000200!8.40e-09!6;UBERON:0001871!9.91e-09!7;UBERON:0000153!1.76e-07!129;UBERON:0007811!1.76e-07!129;UBERON:0000025!3.76e-07!194;UBERON:0000033!3.81e-07!123;UBERON:0004121!6.60e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;2.91e-15;6!UBERON:0000956;4.38e-15;25!UBERON:0000203;4.38e-15;25!UBERON:0001950;2.81e-13;20!UBERON:0002619;4.07e-12;22!UBERON:0002791;5.84e-12;32!UBERON:0001869;5.84e-12;32!UBERON:0001893;8.80e-10;34!UBERON:0002021;1.06e-09;5!UBERON:0003528;3.16e-09;34!UBERON:0002020;3.16e-09;34!UBERON:0003688;3.13e-08;6!UBERON:0002358;3.13e-08;6!UBERON:0003684;3.13e-08;6!UBERON:0001178;3.13e-08;6!UBERON:0001017;5.45e-08;75!UBERON:0002771;4.82e-07;2!UBERON:0001876;5.89e-07;2!UBERON:0002360;9.01e-07;2!UBERON:0000094;9.01e-07;2!UBERON:0001529;9.01e-07;2!UBERON:0007204;9.01e-07;2!UBERON:0010743;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.71e-15,6;UBERON:0000956,4.44e-15,25;UBERON:0000203,4.44e-15,25;UBERON:0001017,9.59e-15,81;UBERON:0001950,2.93e-13,20;UBERON:0001016,3.74e-13,89;UBERON:0002619,4.22e-12,22;UBERON:0002791,8.33e-12,32;UBERON:0001869,8.33e-12,32;UBERON:0003528,4.14e-11,34;UBERON:0002020,4.14e-11,34;UBERON:0001893,4.14e-11,34;UBERON:0002021,1.21e-09,5;UBERON:0000955,2.78e-09,68;UBERON:0006238,2.78e-09,68;UBERON:0002780,3.41e-09,41;UBERON:0001890,3.41e-09,41;UBERON:0003080,3.41e-09,41;UBERON:0006240,3.41e-09,41;UBERON:0003688,3.50e-08,6;UBERON:0002358,3.50e-08,6;UBERON:0003684,3.50e-08,6;UBERON:0001178,3.50e-08,6;UBERON:0000073,4.66e-07,53;UBERON:0002616,4.66e-07,53;UBERON:0002771,5.11e-07,2;UBERON:0001876,5.41e-07,2;UBERON:0002360,6.80e-07,2;UBERON:0000094,6.80e-07,2;UBERON:0010743,6.80e-07,2;UBERON:0001529,7.61e-07,2;UBERON:0007204,7.61e-07,2 | |||
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|short_description=p19@ENC1 | |||
}} |
Revision as of 16:23, 13 September 2013
Short description: | p19@ENC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_ENC1_5end |
Coexpression cluster: | C4519_medial_Neurons_brain_duodenum_Mesothelial_amygdala_cerebral |
Association with transcript: | 315bp_to_AF059611_5end |
EntrezGene: | ENC1 |
HGNC: | 3345 |
UniProt: | O14682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.91e-15 | 3 |
neuron | 1.67e-08 | 6 |
neuroblast | 1.67e-08 | 6 |
electrically signaling cell | 1.67e-08 | 6 |
smooth muscle cell of the brachiocephalic vasculature | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.71e-15 | 6 |
cerebral cortex | 4.44e-15 | 25 |
pallium | 4.44e-15 | 25 |
central nervous system | 9.59e-15 | 81 |
neocortex | 2.93e-13 | 20 |
nervous system | 3.74e-13 | 89 |
regional part of cerebral cortex | 4.22e-12 | 22 |
regional part of telencephalon | 8.33e-12 | 32 |
cerebral hemisphere | 8.33e-12 | 32 |
brain grey matter | 4.14e-11 | 34 |
gray matter | 4.14e-11 | 34 |
telencephalon | 4.14e-11 | 34 |
occipital lobe | 1.21e-09 | 5 |
brain | 2.78e-09 | 68 |
future brain | 2.78e-09 | 68 |
regional part of forebrain | 3.41e-09 | 41 |
forebrain | 3.41e-09 | 41 |
anterior neural tube | 3.41e-09 | 41 |
future forebrain | 3.41e-09 | 41 |
omentum | 3.50e-08 | 6 |
peritoneum | 3.50e-08 | 6 |
abdominal cavity | 3.50e-08 | 6 |
visceral peritoneum | 3.50e-08 | 6 |
regional part of nervous system | 4.66e-07 | 53 |
regional part of brain | 4.66e-07 | 53 |
middle temporal gyrus | 5.11e-07 | 2 |
amygdala | 5.41e-07 | 2 |
meninx | 6.80e-07 | 2 |
membrane organ | 6.80e-07 | 2 |
meningeal cluster | 6.80e-07 | 2 |
brachiocephalic artery | 7.61e-07 | 2 |
brachiocephalic vasculature | 7.61e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.