FFCP PHASE1:Hg19::chr5:76081484..76081487,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:76081484..76081487,-|id=chr5:76081484..76081487,-|ontology_enrichment_celltype=CL:0000066!7.51e-15!254;CL:0000076!8.86e-11!62;CL:0000548!8.93e-09!679;CL:0000004!8.93e-09!679;CL:0000255!8.93e-09!679;CL:0000012!1.37e-08!682;CL:0000213!5.11e-08!57;CL:0000215!5.11e-08!57;CL:0002202!6.63e-08!9;CL:0002632!6.63e-08!9;CL:0000220!1.73e-07!246;CL:0002321!2.59e-07!248;CL:0000063!6.05e-07!578;CL:0000071!9.61e-07!18;CL:0002546!9.61e-07!18|ontology_enrichment_celltype_v019=CL:1001319;8.72e-18;1!CL:1000600;8.72e-18;1!CL:0002367;1.44e-09;2!CL:0002202;2.24e-08;9!CL:0002632;2.24e-08;9!CL:0000322;5.97e-07;3!CL:0000307;8.62e-07;3|ontology_enrichment_celltype_v019_2=CL:1001319,1.70e-17,1;CL:1000600,1.70e-17,1;CL:0002367,1.57e-09,2;CL:0002202,2.46e-08,9;CL:0002632,2.46e-08,9;CL:0000322,6.14e-07,3;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3|ontology_enrichment_development_v019=CL:0000377;8.62e-07;3|ontology_enrichment_disease=DOID:305!7.67e-16!106;DOID:0050687!1.70e-13!143;DOID:162!1.02e-12!235;DOID:14566!4.48e-12!239;DOID:1749!1.97e-08!14;DOID:299!9.91e-07!25|ontology_enrichment_disease_v019=DOID:3910;8.32e-10;2!DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:3498;1.44e-09;2|ontology_enrichment_disease_v019_2=DOID:3910,8.69e-10,2;DOID:4074,1.44e-09,2;DOID:4905,1.44e-09,2;DOID:3498,1.44e-09,2|ontology_enrichment_uberon=UBERON:0000487!4.10e-09!22;UBERON:0006914!1.28e-07!25;UBERON:0001986!9.61e-07!18;UBERON:0004638!9.61e-07!18;UBERON:0004852!9.61e-07!18|ontology_enrichment_uberon_v019=UBERON:0004645;8.72e-18;1!UBERON:0001256;8.72e-18;1!UBERON:0001259;8.72e-18;1!UBERON:0004903;8.32e-10;2!UBERON:0002173;8.32e-10;2!UBERON:0002186;8.32e-10;2!UBERON:0001255;1.44e-09;2!UBERON:0005969;1.44e-09;2!UBERON:0001556;1.44e-09;2!UBERON:0003956;1.44e-09;2!UBERON:0004821;5.97e-07;3!UBERON:0007499;5.97e-07;3!UBERON:0003215;5.97e-07;3!UBERON:0010368;5.97e-07;3!UBERON:0009911;5.97e-07;3!UBERON:0002299;5.97e-07;3!UBERON:0006524;5.97e-07;3!UBERON:0008874;5.97e-07;3!UBERON:0002169;5.97e-07;3!UBERON:0004894;5.97e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.70e-17,1;UBERON:0001256,1.70e-17,1;UBERON:0001259,1.70e-17,1;UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0005969,1.57e-09,2;UBERON:0003956,1.57e-09,2;UBERON:0001255,2.02e-09,2;UBERON:0001556,2.02e-09,2;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0,0,0.22452937262617,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,1.13841952129715,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,3.40963376167696,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,3.64139034513599,0.2542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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:76081484..76081487,- | |||
|id=chr5:76081484..76081487,- | |||
|ontology_enrichment_celltype=CL:0000066!7.51e-15!254;CL:0000076!8.86e-11!62;CL:0000548!8.93e-09!679;CL:0000004!8.93e-09!679;CL:0000255!8.93e-09!679;CL:0000012!1.37e-08!682;CL:0000213!5.11e-08!57;CL:0000215!5.11e-08!57;CL:0002202!6.63e-08!9;CL:0002632!6.63e-08!9;CL:0000220!1.73e-07!246;CL:0002321!2.59e-07!248;CL:0000063!6.05e-07!578;CL:0000071!9.61e-07!18;CL:0002546!9.61e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1001319;8.72e-18;1!CL:1000600;8.72e-18;1!CL:0002367;1.44e-09;2!CL:0002202;2.24e-08;9!CL:0002632;2.24e-08;9!CL:0000322;5.97e-07;3!CL:0000307;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.70e-17,1;CL:1000600,1.70e-17,1;CL:0002367,1.57e-09,2;CL:0002202,2.46e-08,9;CL:0002632,2.46e-08,9;CL:0000322,6.14e-07,3;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;8.62e-07;3 | |||
|ontology_enrichment_disease=DOID:305!7.67e-16!106;DOID:0050687!1.70e-13!143;DOID:162!1.02e-12!235;DOID:14566!4.48e-12!239;DOID:1749!1.97e-08!14;DOID:299!9.91e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3910;8.32e-10;2!DOID:4074;1.44e-09;2!DOID:4905;1.44e-09;2!DOID:3498;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.69e-10,2;DOID:4074,1.44e-09,2;DOID:4905,1.44e-09,2;DOID:3498,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000487!4.10e-09!22;UBERON:0006914!1.28e-07!25;UBERON:0001986!9.61e-07!18;UBERON:0004638!9.61e-07!18;UBERON:0004852!9.61e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.72e-18;1!UBERON:0001256;8.72e-18;1!UBERON:0001259;8.72e-18;1!UBERON:0004903;8.32e-10;2!UBERON:0002173;8.32e-10;2!UBERON:0002186;8.32e-10;2!UBERON:0001255;1.44e-09;2!UBERON:0005969;1.44e-09;2!UBERON:0001556;1.44e-09;2!UBERON:0003956;1.44e-09;2!UBERON:0004821;5.97e-07;3!UBERON:0007499;5.97e-07;3!UBERON:0003215;5.97e-07;3!UBERON:0010368;5.97e-07;3!UBERON:0009911;5.97e-07;3!UBERON:0002299;5.97e-07;3!UBERON:0006524;5.97e-07;3!UBERON:0008874;5.97e-07;3!UBERON:0002169;5.97e-07;3!UBERON:0004894;5.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.70e-17,1;UBERON:0001256,1.70e-17,1;UBERON:0001259,1.70e-17,1;UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0005969,1.57e-09,2;UBERON:0003956,1.57e-09,2;UBERON:0001255,2.02e-09,2;UBERON:0001556,2.02e-09,2;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0.735326160691737,0,0,0.22452937262617,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,1.13841952129715,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,3.40963376167696,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,3.64139034513599,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0.326465616318295,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0.103688191397247,0.664653872707185,0,0,0,0,0,0,0.195984794828755,0.261177619741208,0,0,0,0.0730893170861856,0,0,0,0,0.411125773940253,0.397429223405979,0,0,0.240476460754601,0,0,0.288180834308212,0,0,0.864328787928898,0.124252535565433,0,1.35904206073614,0.627617077873999,0.407992870545287,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0.121792598380896,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.466311601748341,0.295710299979268,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0.337884881306145,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825788063434183,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,0.49131575253029,0.887136517302272,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0.171488009437418,0,0,0,0.556157009460346,0,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0.335566295393377,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.407955318967927,0.26721740526556,0,0,0,0,0,0,0,0,0,0,1.56984607612859,0,0,0,0,0,0,0,1.05824249194267,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr5:76081484..76081487,- | |||
}} |
Revision as of 16:28, 13 September 2013
Short description: | p@chr5:76081484..76081487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:76081484..76081487, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.70e-17 | 1 |
lower urinary tract cell | 1.70e-17 | 1 |
trabecular meshwork cell | 1.57e-09 | 2 |
epithelial cell of tracheobronchial tree | 2.46e-08 | 9 |
epithelial cell of lower respiratory tract | 2.46e-08 | 9 |
pneumocyte | 6.14e-07 | 3 |
duct epithelial cell | 9.64e-07 | 3 |
branched duct epithelial cell | 9.64e-07 | 3 |
tracheal epithelial cell | 9.64e-07 | 3 |
tracheoblast | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.70e-17 | 1 |
wall of urinary bladder | 1.70e-17 | 1 |
mucosa of urinary bladder | 1.70e-17 | 1 |
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
reticulum trabeculare | 1.57e-09 | 2 |
aqueous drainage system | 1.57e-09 | 2 |
urinary bladder | 2.02e-09 | 2 |
lower urinary tract | 2.02e-09 | 2 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.69e-10 | 2 |
pancreas adenocarcinoma | 1.44e-09 | 2 |
pancreatic carcinoma | 1.44e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.44e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.