FFCP PHASE1:Mm9::chr18:82748407..82748411,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=270|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:82748407..82748411,+|id=chr18:82748407..82748411,+|ontology_enrichment_celltype=CL:0000221!6.13e-10!44;CL:0000133!6.13e-10!44;CL:0002319!5.40e-09!43;CL:0000117!4.54e-08!23;CL:0000337!4.54e-08!23;CL:0002610!7.47e-08!3;CL:0002614!1.29e-07!3;CL:0000055!3.35e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-14,23;CL:0000337,2.02e-14,23;CL:0002610,2.69e-14,3;CL:0002614,8.06e-14,3;CL:0002611,3.00e-10,2;CL:0000540,1.22e-09,33;CL:0000047,1.22e-09,33;CL:0000031,1.22e-09,33;CL:0000404,1.22e-09,33;CL:0002319,1.12e-08,43;CL:0000221,1.91e-08,44;CL:0000133,1.91e-08,44;CL:0000393,6.03e-08,39;CL:0000211,6.03e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.37e-29!75;UBERON:0001016!7.37e-29!75;UBERON:0001017!2.96e-26!73;UBERON:0005743!2.96e-26!73;UBERON:0001049!1.79e-25!52;UBERON:0005068!1.79e-25!52;UBERON:0006241!1.79e-25!52;UBERON:0007135!1.79e-25!52;UBERON:0000955!1.14e-24!50;UBERON:0006238!1.14e-24!50;UBERON:0002616!2.82e-23!49;UBERON:0004121!6.14e-23!102;UBERON:0000924!6.14e-23!102;UBERON:0006601!6.14e-23!102;UBERON:0000033!7.19e-23!63;UBERON:0002346!1.74e-19!71;UBERON:0003075!1.74e-19!71;UBERON:0007284!1.74e-19!71;UBERON:0002020!4.40e-18!34;UBERON:0003076!3.22e-16!12;UBERON:0003057!3.22e-16!12;UBERON:0007811!6.62e-16!86;UBERON:0002021!1.88e-15!10;UBERON:0000411!1.88e-15!10;UBERON:0001950!1.88e-15!10;UBERON:0000153!4.82e-15!94;UBERON:0002298!4.82e-13!6;UBERON:0002791!8.44e-13!29;UBERON:0003528!8.44e-13!29;UBERON:0001893!8.44e-13!29;UBERON:0003080!1.18e-12!40;UBERON:0003056!6.55e-12!49;UBERON:0002780!1.37e-11!39;UBERON:0001890!1.37e-11!39;UBERON:0006240!1.37e-11!39;UBERON:0002619!3.34e-10!17;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002240!3.78e-09!6;UBERON:0005174!3.78e-09!6;UBERON:0001137!3.78e-09!6;UBERON:0002950!4.43e-09!4;UBERON:0001891!4.43e-09!4;UBERON:0009616!4.43e-09!4;UBERON:0004733!1.38e-08!6;UBERON:0004732!1.38e-08!6;UBERON:0002028!1.38e-08!6;UBERON:0007277!1.38e-08!6;UBERON:0000025!1.47e-08!114;UBERON:0004111!2.59e-08!122;UBERON:0004684!7.47e-08!3;UBERON:0002275!7.47e-08!3;UBERON:0002038!1.29e-07!3;UBERON:0002308!1.29e-07!3;UBERON:0009663!1.29e-07!3;UBERON:0009661!1.29e-07!3;UBERON:0006331!1.29e-07!3;UBERON:0000125!1.29e-07!3;UBERON:0001948!1.97e-07!5;UBERON:0002315!1.97e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.33e-26,54;UBERON:0001016,3.24e-22,75;UBERON:0001049,6.71e-21,52;UBERON:0005068,6.71e-21,52;UBERON:0006241,6.71e-21,52;UBERON:0007135,6.71e-21,52;UBERON:0001017,1.24e-20,73;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0003076,1.04e-16,12;UBERON:0003057,1.04e-16,12;UBERON:0002346,1.83e-16,64;UBERON:0003075,1.83e-16,64;UBERON:0007284,1.83e-16,64;UBERON:0004684,2.69e-14,3;UBERON:0002275,2.69e-14,3;UBERON:0010371,4.34e-14,73;UBERON:0002038,8.06e-14,3;UBERON:0009663,8.06e-14,3;UBERON:0009661,8.06e-14,3;UBERON:0000125,8.06e-14,3;UBERON:0002308,8.06e-14,3;UBERON:0002020,1.65e-13,34;UBERON:0002616,2.09e-13,46;UBERON:0000955,4.49e-13,47;UBERON:0006238,4.49e-13,47;UBERON:0002240,1.08e-11,6;UBERON:0005174,1.08e-11,6;UBERON:0001137,1.08e-11,6;UBERON:0010314,1.36e-10,92;UBERON:0002950,1.72e-10,4;UBERON:0001891,1.72e-10,4;UBERON:0009616,1.72e-10,4;UBERON:0010286,1.72e-10,4;UBERON:0002021,2.98e-10,10;UBERON:0000411,2.98e-10,10;UBERON:0001950,2.98e-10,10;UBERON:0002256,3.00e-10,2;UBERON:0001896,1.11e-09,2;UBERON:0002298,1.11e-09,2;UBERON:0005290,1.11e-09,2;UBERON:0010096,1.11e-09,2;UBERON:0002780,2.45e-09,39;UBERON:0001890,2.45e-09,39;UBERON:0006240,2.45e-09,39;UBERON:0003080,4.59e-09,40;UBERON:0001948,1.55e-08,5;UBERON:0002315,1.55e-08,5;UBERON:0003528,2.47e-08,29;UBERON:0002791,2.47e-08,29;UBERON:0001893,2.47e-08,29;UBERON:0000025,5.49e-08,114;UBERON:0004111,2.86e-07,122;UBERON:0003056,4.09e-07,49;UBERON:0004733,6.80e-07,6;UBERON:0004732,6.80e-07,6;UBERON:0002028,6.80e-07,6;UBERON:0007277,6.80e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,7.7125765789027,6.84692476950002,0,0,0,8.8092704799511,5.36286819957788,3.07213066512487,0,0,0,6.42120897703176,1.68828783009504,4.12555268997387,1.47314292736834,0.854230084794618,0,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46612694769419,0,0,0,0,0.449371918214468,0.915001205637253,0,0.521472960576829,0.255715457330331,1.66230435647648,1.94689515681309,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:82748407..82748411,+ | |||
|id=chr18:82748407..82748411,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.13e-10!44;CL:0000133!6.13e-10!44;CL:0002319!5.40e-09!43;CL:0000117!4.54e-08!23;CL:0000337!4.54e-08!23;CL:0002610!7.47e-08!3;CL:0002614!1.29e-07!3;CL:0000055!3.35e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.02e-14,23;CL:0000337,2.02e-14,23;CL:0002610,2.69e-14,3;CL:0002614,8.06e-14,3;CL:0002611,3.00e-10,2;CL:0000540,1.22e-09,33;CL:0000047,1.22e-09,33;CL:0000031,1.22e-09,33;CL:0000404,1.22e-09,33;CL:0002319,1.12e-08,43;CL:0000221,1.91e-08,44;CL:0000133,1.91e-08,44;CL:0000393,6.03e-08,39;CL:0000211,6.03e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.37e-29!75;UBERON:0001016!7.37e-29!75;UBERON:0001017!2.96e-26!73;UBERON:0005743!2.96e-26!73;UBERON:0001049!1.79e-25!52;UBERON:0005068!1.79e-25!52;UBERON:0006241!1.79e-25!52;UBERON:0007135!1.79e-25!52;UBERON:0000955!1.14e-24!50;UBERON:0006238!1.14e-24!50;UBERON:0002616!2.82e-23!49;UBERON:0004121!6.14e-23!102;UBERON:0000924!6.14e-23!102;UBERON:0006601!6.14e-23!102;UBERON:0000033!7.19e-23!63;UBERON:0002346!1.74e-19!71;UBERON:0003075!1.74e-19!71;UBERON:0007284!1.74e-19!71;UBERON:0002020!4.40e-18!34;UBERON:0003076!3.22e-16!12;UBERON:0003057!3.22e-16!12;UBERON:0007811!6.62e-16!86;UBERON:0002021!1.88e-15!10;UBERON:0000411!1.88e-15!10;UBERON:0001950!1.88e-15!10;UBERON:0000153!4.82e-15!94;UBERON:0002298!4.82e-13!6;UBERON:0002791!8.44e-13!29;UBERON:0003528!8.44e-13!29;UBERON:0001893!8.44e-13!29;UBERON:0003080!1.18e-12!40;UBERON:0003056!6.55e-12!49;UBERON:0002780!1.37e-11!39;UBERON:0001890!1.37e-11!39;UBERON:0006240!1.37e-11!39;UBERON:0002619!3.34e-10!17;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002240!3.78e-09!6;UBERON:0005174!3.78e-09!6;UBERON:0001137!3.78e-09!6;UBERON:0002950!4.43e-09!4;UBERON:0001891!4.43e-09!4;UBERON:0009616!4.43e-09!4;UBERON:0004733!1.38e-08!6;UBERON:0004732!1.38e-08!6;UBERON:0002028!1.38e-08!6;UBERON:0007277!1.38e-08!6;UBERON:0000025!1.47e-08!114;UBERON:0004111!2.59e-08!122;UBERON:0004684!7.47e-08!3;UBERON:0002275!7.47e-08!3;UBERON:0002038!1.29e-07!3;UBERON:0002308!1.29e-07!3;UBERON:0009663!1.29e-07!3;UBERON:0009661!1.29e-07!3;UBERON:0006331!1.29e-07!3;UBERON:0000125!1.29e-07!3;UBERON:0001948!1.97e-07!5;UBERON:0002315!1.97e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.33e-26,54;UBERON:0001016,3.24e-22,75;UBERON:0001049,6.71e-21,52;UBERON:0005068,6.71e-21,52;UBERON:0006241,6.71e-21,52;UBERON:0007135,6.71e-21,52;UBERON:0001017,1.24e-20,73;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0003076,1.04e-16,12;UBERON:0003057,1.04e-16,12;UBERON:0002346,1.83e-16,64;UBERON:0003075,1.83e-16,64;UBERON:0007284,1.83e-16,64;UBERON:0004684,2.69e-14,3;UBERON:0002275,2.69e-14,3;UBERON:0010371,4.34e-14,73;UBERON:0002038,8.06e-14,3;UBERON:0009663,8.06e-14,3;UBERON:0009661,8.06e-14,3;UBERON:0000125,8.06e-14,3;UBERON:0002308,8.06e-14,3;UBERON:0002020,1.65e-13,34;UBERON:0002616,2.09e-13,46;UBERON:0000955,4.49e-13,47;UBERON:0006238,4.49e-13,47;UBERON:0002240,1.08e-11,6;UBERON:0005174,1.08e-11,6;UBERON:0001137,1.08e-11,6;UBERON:0010314,1.36e-10,92;UBERON:0002950,1.72e-10,4;UBERON:0001891,1.72e-10,4;UBERON:0009616,1.72e-10,4;UBERON:0010286,1.72e-10,4;UBERON:0002021,2.98e-10,10;UBERON:0000411,2.98e-10,10;UBERON:0001950,2.98e-10,10;UBERON:0002256,3.00e-10,2;UBERON:0001896,1.11e-09,2;UBERON:0002298,1.11e-09,2;UBERON:0005290,1.11e-09,2;UBERON:0010096,1.11e-09,2;UBERON:0002780,2.45e-09,39;UBERON:0001890,2.45e-09,39;UBERON:0006240,2.45e-09,39;UBERON:0003080,4.59e-09,40;UBERON:0001948,1.55e-08,5;UBERON:0002315,1.55e-08,5;UBERON:0003528,2.47e-08,29;UBERON:0002791,2.47e-08,29;UBERON:0001893,2.47e-08,29;UBERON:0000025,5.49e-08,114;UBERON:0004111,2.86e-07,122;UBERON:0003056,4.09e-07,49;UBERON:0004733,6.80e-07,6;UBERON:0004732,6.80e-07,6;UBERON:0002028,6.80e-07,6;UBERON:0007277,6.80e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,7.7125765789027,6.84692476950002,0,0,0,8.8092704799511,5.36286819957788,3.07213066512487,0,0,0,6.42120897703176,1.68828783009504,4.12555268997387,1.47314292736834,0.854230084794618,0,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46612694769419,0,0,0,0,0.449371918214468,0.915001205637253,0,0.521472960576829,0.255715457330331,1.66230435647648,1.94689515681309,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.9266070798535,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,0.572895513439397,0.859265911718438,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr18:82748407..82748411,+ | |||
}} |
Revision as of 16:52, 13 September 2013
Short description: | p@chr18:82748407..82748411, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82748407..82748411, + |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.02e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-14 | 23 |
raphe nuclei neuron | 2.69e-14 | 3 |
neuron of the substantia nigra | 8.06e-14 | 3 |
neuron of the dorsal spinal cord | 3.00e-10 | 2 |
neuron | 1.22e-09 | 33 |
neuronal stem cell | 1.22e-09 | 33 |
neuroblast | 1.22e-09 | 33 |
electrically signaling cell | 1.22e-09 | 33 |
neural cell | 1.12e-08 | 43 |
ectodermal cell | 1.91e-08 | 44 |
neurectodermal cell | 1.91e-08 | 44 |
electrically responsive cell | 6.03e-08 | 39 |
electrically active cell | 6.03e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.