FFCP PHASE1:Mm9::chr19:42826949..42827007,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74580|HGNC=|MCL_coexpression_id=88|UniProt=E9QPD2,Q3U4I7,B9EIT1,B7ZN16|association_with_transcript=257bp_to_ENSMUST00000076505,NM_029011,uc008hnu.1,uc008hnv.1,uc008hnw.1,uc012bly.1,uc012blz.1_5end|description=CAGE_peak_1_at_Pyroxd2_5end|id=chr19:42826949..42827007,-|ontology_enrichment_celltype=CL:0000066!1.35e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,4.64e-08,25;CL:0000223,8.20e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!8.08e-11!49;UBERON:0005173!8.08e-11!49;UBERON:0002417!8.08e-11!49;UBERON:0000916!8.08e-11!49;UBERON:0009569!4.32e-08!66;UBERON:0000344!4.89e-08!15;UBERON:0005256!9.95e-08!47;UBERON:0001242!6.09e-07!13;UBERON:0000060!6.09e-07!13;UBERON:0001262!6.09e-07!13;UBERON:0004786!6.09e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.23e-10,49;UBERON:0005173,1.23e-10,49;UBERON:0002417,1.23e-10,49;UBERON:0000916,1.23e-10,49;UBERON:0003104,1.53e-09,61;UBERON:0009142,1.53e-09,61;UBERON:0000160,2.01e-08,31;UBERON:0009569,3.31e-08,66;UBERON:0000344,4.05e-08,15;UBERON:0005256,5.21e-08,45;UBERON:0001242,5.21e-07,13;UBERON:0001262,5.21e-07,13;UBERON:0004786,5.21e-07,13|phase1_expression=6.24580503708696,54.091188184101,48.6849186146804,123.405398213187,127.227515406372,17.7952028226603,13.0823078733494,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0.699561878128147,0.157731082679119,0.274228867211478,1.27316895539409,11.6509307506966,0,0,21.4389846543165,19.4997888907094,35.0281498110162,27.1380057580217,17.2376986148711,30.0237002741071,25.2030129759931,7.09537634096975,0.635030673459631,0.61506478758457,0,14.4425809875637,9.64160943079256,11.8418226632174,0,0,0,0.588231488031014,0,0,5.03587271902309,6.48812359804893,8.62669735159903,25.8189143634853,1.09012578190223,3.51497892375155,2.72201858703997,4.19959264876088,2.87505128729943,0,0,0,4.11615097657515,4.87106847895886,6.18806510732931,0.809265843438391,0.528990979272033,0.633831403506179,5.08266798103698,5.33576877666684,5.84934816232909,5.93319817540185,6.3943210345149,5.69240209984969,11.9107674649682,0.725827286159344,1.08004750665353,0.420649922702764,3.42781181284564,2.20868540951614,0.61245399607477,0.575072826109418,0,1.10115880999389,2.042997409363,0.921639199537461,1.31886287730194,1.00636407962651,1.04182674111352,4.18774498502071,3.93933827022176,3.36156145108982,1.76777151284201,2.42031857358475,1.4911955666024,0,0.453429360640713,5.50742528533188,18.0689014166091,13.599426674155,22.6675340487883,22.0923981932207,16.1289679355041,10.5333315098814,4.26075806445144,1.81850203222008,5.65343319216544,1.12674735821344,21.815501160434,15.2883143823987,42.6640021891999,0,0,0,23.5218792221264,2.07150306917737,14.8442139064825,4.68410382268567,9.43842982767638,11.0695438682908,18.38816214742,19.519725384527,21.1119873433855,8.40462890296871,1.87979163995885,0,3.72063754879041,1.32504911076236,2.42437626567611,5.59175283654366,0.878342391034642,1.8850203613211,5.8755122697976,0.359445373517761,0.599902730993408,0.762421362438388,0.898743836428936,0.457500602818626,0.753926112677186,1.39059456153821,1.02286182932132,1.0389402227978,0.811206315338788,9.67473956578005,6.46916247172484,21.9868799837297,3.78795340595653,0.650602214813519,2.06911893990126,1.44049703844279,3.46621081022145,2.4493139694478,2.562274405697,3.5606655332697,1.29351685369508,0.215567992932842,1.13463648100692,1.05570674498369,2.41115305670332,1.11218899690239,3.48252166522167,2.26360350048738,6.36909653819178,1.40442637462647,0.51469581422943,2.55747149456033,2.07125772535502,2.81431271977315,3.96136535214233,3.55117103377815,4.9191057936851,4.9365476123961,3.25547522650571,3.21928081679543,4.55384835231961,4.77223564749093,2.79084688934462,2.1888578577381,2.19299981137998,2.41505126820156,2.14730270016595,1.05144974282064,2.26390147234426,1.65209391491899,25.3872543997003,1.2797295032114,2.78684006232526,3.09281907173024,9.4791256572971,12.8979265430025,14.4571475845545,0.474529061544512,9.55253937399263,18.3474702424197,16.5133871794155,15.5971269695296,3.59527763461689,1.94524244887225,5.97423819763102,3.03468641524931,4.68418901699888,4.50830942692322,5.09128319613286,8.33995694820791,11.8529535614638,25.1681417754544,35.5740456630841,37.67969468193,46.7675251263624,14.2297261001831,1.66845105716094,0.786235980452812,0.899448449539415,2.43432145666204,3.85883455603867,5.85639459097266,7.48009957372108,3.89124544260085,8.51140380883053,18.6898668485561,12.2806512730606,14.0416952901552,11.36604950762,25.4744327201115,18.8152973331713,1.10851914099963,2.27389694124582,3.25929952884052,5.43184274480602,4.22442446919304,5.86271901046355,3.80869825417622,3.51240566144038,4.88668946729192,4.4292937929755,5.89982644032702,1.14704320301017,3.28101465545202,2.16973587872267,0,1.08781136763742,9.34352118736169,7.72622889653251,0.642202359951168,0.586058432961016,2.29508923527346,1.51482556322624,0,1.56175497718655,1.50796378412959,0.955875191810208,2.45078541490634,1.132306123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| ||
|EntrezGene=74580 | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=E9QPD2,Q3U4I7,B9EIT1,B7ZN16 | |||
|association_with_transcript=257bp_to_ENSMUST00000076505,NM_029011,uc008hnu.1,uc008hnv.1,uc008hnw.1,uc012bly.1,uc012blz.1_5end | |||
|description=CAGE_peak_1_at_Pyroxd2_5end | |||
|id=chr19:42826949..42827007,- | |||
|ontology_enrichment_celltype=CL:0000066!1.35e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.64e-08,25;CL:0000223,8.20e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!8.08e-11!49;UBERON:0005173!8.08e-11!49;UBERON:0002417!8.08e-11!49;UBERON:0000916!8.08e-11!49;UBERON:0009569!4.32e-08!66;UBERON:0000344!4.89e-08!15;UBERON:0005256!9.95e-08!47;UBERON:0001242!6.09e-07!13;UBERON:0000060!6.09e-07!13;UBERON:0001262!6.09e-07!13;UBERON:0004786!6.09e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.23e-10,49;UBERON:0005173,1.23e-10,49;UBERON:0002417,1.23e-10,49;UBERON:0000916,1.23e-10,49;UBERON:0003104,1.53e-09,61;UBERON:0009142,1.53e-09,61;UBERON:0000160,2.01e-08,31;UBERON:0009569,3.31e-08,66;UBERON:0000344,4.05e-08,15;UBERON:0005256,5.21e-08,45;UBERON:0001242,5.21e-07,13;UBERON:0001262,5.21e-07,13;UBERON:0004786,5.21e-07,13 | |||
|phase1_expression=6.24580503708696,54.091188184101,48.6849186146804,123.405398213187,127.227515406372,17.7952028226603,13.0823078733494,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0.699561878128147,0.157731082679119,0.274228867211478,1.27316895539409,11.6509307506966,0,0,21.4389846543165,19.4997888907094,35.0281498110162,27.1380057580217,17.2376986148711,30.0237002741071,25.2030129759931,7.09537634096975,0.635030673459631,0.61506478758457,0,14.4425809875637,9.64160943079256,11.8418226632174,0,0,0,0.588231488031014,0,0,5.03587271902309,6.48812359804893,8.62669735159903,25.8189143634853,1.09012578190223,3.51497892375155,2.72201858703997,4.19959264876088,2.87505128729943,0,0,0,4.11615097657515,4.87106847895886,6.18806510732931,0.809265843438391,0.528990979272033,0.633831403506179,5.08266798103698,5.33576877666684,5.84934816232909,5.93319817540185,6.3943210345149,5.69240209984969,11.9107674649682,0.725827286159344,1.08004750665353,0.420649922702764,3.42781181284564,2.20868540951614,0.61245399607477,0.575072826109418,0,1.10115880999389,2.042997409363,0.921639199537461,1.31886287730194,1.00636407962651,1.04182674111352,4.18774498502071,3.93933827022176,3.36156145108982,1.76777151284201,2.42031857358475,1.4911955666024,0,0.453429360640713,5.50742528533188,18.0689014166091,13.599426674155,22.6675340487883,22.0923981932207,16.1289679355041,10.5333315098814,4.26075806445144,1.81850203222008,5.65343319216544,1.12674735821344,21.815501160434,15.2883143823987,42.6640021891999,0,0,0,23.5218792221264,2.07150306917737,14.8442139064825,4.68410382268567,9.43842982767638,11.0695438682908,18.38816214742,19.519725384527,21.1119873433855,8.40462890296871,1.87979163995885,0,3.72063754879041,1.32504911076236,2.42437626567611,5.59175283654366,0.878342391034642,1.8850203613211,5.8755122697976,0.359445373517761,0.599902730993408,0.762421362438388,0.898743836428936,0.457500602818626,0.753926112677186,1.39059456153821,1.02286182932132,1.0389402227978,0.811206315338788,9.67473956578005,6.46916247172484,21.9868799837297,3.78795340595653,0.650602214813519,2.06911893990126,1.44049703844279,3.46621081022145,2.4493139694478,2.562274405697,3.5606655332697,1.29351685369508,0.215567992932842,1.13463648100692,1.05570674498369,2.41115305670332,1.11218899690239,3.48252166522167,2.26360350048738,6.36909653819178,1.40442637462647,0.51469581422943,2.55747149456033,2.07125772535502,2.81431271977315,3.96136535214233,3.55117103377815,4.9191057936851,4.9365476123961,3.25547522650571,3.21928081679543,4.55384835231961,4.77223564749093,2.79084688934462,2.1888578577381,2.19299981137998,2.41505126820156,2.14730270016595,1.05144974282064,2.26390147234426,1.65209391491899,25.3872543997003,1.2797295032114,2.78684006232526,3.09281907173024,9.4791256572971,12.8979265430025,14.4571475845545,0.474529061544512,9.55253937399263,18.3474702424197,16.5133871794155,15.5971269695296,3.59527763461689,1.94524244887225,5.97423819763102,3.03468641524931,4.68418901699888,4.50830942692322,5.09128319613286,8.33995694820791,11.8529535614638,25.1681417754544,35.5740456630841,37.67969468193,46.7675251263624,14.2297261001831,1.66845105716094,0.786235980452812,0.899448449539415,2.43432145666204,3.85883455603867,5.85639459097266,7.48009957372108,3.89124544260085,8.51140380883053,18.6898668485561,12.2806512730606,14.0416952901552,11.36604950762,25.4744327201115,18.8152973331713,1.10851914099963,2.27389694124582,3.25929952884052,5.43184274480602,4.22442446919304,5.86271901046355,3.80869825417622,3.51240566144038,4.88668946729192,4.4292937929755,5.89982644032702,1.14704320301017,3.28101465545202,2.16973587872267,0,1.08781136763742,9.34352118736169,7.72622889653251,0.642202359951168,0.586058432961016,2.29508923527346,1.51482556322624,0,1.56175497718655,1.50796378412959,0.955875191810208,2.45078541490634,1.13230612315533,0,1.75353514746787,0.395287777946524,1.28528526568723,14.9037089468682,10.3278050127008,9.77321756121457,13.6925202067204,1.32745138339963,1.21390318077491,2.41858845571801,1.13163047853539,3.2483208216885,5.53383266299069,5.16856586336442,5.08947221268508,3.56497378384721,1.58018378967908,2.10837217149998,1.03135543248187,1.02131881726136,2.16073312837572,2.97524972700335,4.28674070063185,5.32020700926821,5.70780216326626,7.0756078858912,4.87143918583359,1.87737366450968,5.50763384245932,11.2469483008031,3.2977250588296,3.22928853391811,2.17126529741361,1.55184047204077,2.1338316966858,4.95517422270746,0.370850604021019,1.70870880797853,3.30218988741156,1.48155621895769,3.39063222608444,1.36694227721025,2.0590035588587,0.339956859987711,0.279902904647316,0.552799895217695,2.86401185404534,1.73984796469624,4.06638934253697,3.99619761040665,2.29997125615916,1.9652630737156,3.37160865962052,5.12451425497083,1.57053565190418,5.4438288782553,5.59205381778233,0,8.22341003241883,8.76929999422617,11.8615224889869,11.6243841129958,10.8131920314098,11.6183666259296,10.0257376329842,7.86445083192831,1.20792060413003,0,0,2.63542779877213,1.33524244314275,1.16928740680016,0.17902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| |||
|short_description=p1@Pyroxd2 | |||
}} |
Revision as of 17:40, 13 September 2013
Short description: | p1@Pyroxd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pyroxd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | 257bp_to_ENSMUST00000076505, NM_029011, uc008hnu.1, uc008hnv.1, uc008hnw.1, uc012bly.1, uc012blz.1_5end |
EntrezGene: | Pyroxd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.64e-08 | 25 |
endodermal cell | 8.20e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.23e-10 | 49 |
abdominal segment element | 1.23e-10 | 49 |
abdominal segment of trunk | 1.23e-10 | 49 |
abdomen | 1.23e-10 | 49 |
mesenchyme | 1.53e-09 | 61 |
entire embryonic mesenchyme | 1.53e-09 | 61 |
intestine | 2.01e-08 | 31 |
subdivision of trunk | 3.31e-08 | 66 |
mucosa | 4.05e-08 | 15 |
trunk mesenchyme | 5.21e-08 | 45 |
intestinal mucosa | 5.21e-07 | 13 |
wall of intestine | 5.21e-07 | 13 |
gastrointestinal system mucosa | 5.21e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.