FFCP PHASE1:Hg19::chr6:135505482..135505486,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1970|description=CAGE_peak_at_chr6:135505482..135505486,+|id=chr6:135505482..135505486,+|ontology_enrichment_celltype=CL:0000988!3.64e-32!182;CL:0000037!2.14e-31!172;CL:0000566!2.14e-31!172;CL:0002032!8.40e-28!165;CL:0000837!8.40e-28!165;CL:0000763!2.16e-20!112;CL:0000049!2.16e-20!112;CL:0000738!9.29e-12!140;CL:0002031!1.20e-09!124;CL:0002274!1.57e-07!5;CL:0000457!1.57e-07!5;CL:0002191!1.57e-07!5;CL:0000097!1.57e-07!5;CL:0000831!1.57e-07!5;CL:0002028!1.57e-07!5;CL:0000542!3.37e-07!53;CL:0000051!3.37e-07!53|ontology_enrichment_celltype_v019=CL:0000784;1.02e-09;3|ontology_enrichment_celltype_v019_2=CL:0000988,5.15e-19,177;CL:0000037,7.07e-15,168;CL:0000763,2.08e-14,108;CL:0000049,2.08e-14,108;CL:0002032,4.14e-14,161;CL:0000837,4.14e-14,161;CL:0000784,8.58e-10,3|ontology_enrichment_development_v019=UBERON:0005425;6.62e-08;1|ontology_enrichment_disease=DOID:2531!3.44e-49!51;DOID:0060083!3.44e-49!51;DOID:1240!1.71e-45!39;DOID:8692!2.74e-35!31;DOID:0050686!3.39e-17!137;DOID:1036!5.59e-12!8;DOID:0060058!3.57e-10!10;DOID:162!2.16e-09!235;DOID:14566!7.42e-09!239|ontology_enrichment_disease_v019=DOID:1240;1.37e-46;39!DOID:8692;3.13e-44;31!DOID:2531;2.67e-27;51!DOID:0060083;2.67e-27;51!DOID:1036;6.10e-08;8!DOID:225;6.62e-08;1|ontology_enrichment_disease_v019_2=DOID:1240,4.70e-58,39;DOID:8692,9.83e-46,31;DOID:2531,1.57e-43,51;DOID:0060083,1.57e-43,51;DOID:0050686,1.01e-13,137;DOID:225,6.19e-08,1;DOID:1036,7.77e-08,8|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;6.62e-08;1!UBERON:0001785;6.62e-08;1!UBERON:0002464;6.62e-08;1!UBERON:0004904;6.62e-08;1!UBERON:0001021;6.62e-08;1!UBERON:0002331;7.38e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.63e-08,1;UBERON:0001785,6.63e-08,1;UBERON:0002464,6.63e-08,1;UBERON:0004904,6.63e-08,1;UBERON:0001021,6.63e-08,1;UBERON:0003902,6.63e-08,1;UBERON:0005425,6.63e-08,1;UBERON:0002331,7.17e-07,10;UBERON:0000358,7.17e-07,10;UBERON:0000307,7.17e-07,10;UBERON:0000091,7.17e-07,10;UBERON:0000087,7.17e-07,10;UBERON:0007010,7.17e-07,10;UBERON:0007806,7.17e-07,10;UBERON:0008780,7.17e-07,10;UBERON:0005728,7.17e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.305653622991805,0.328402357799783,0,0,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.568676929949686,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0.324547393654683,0,0,1.90792499444274,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,1.49682337822484,0.621984346622316,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.247528499761764,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,1.4939787103167,1.59426272728822,0.997896857164083,0.957526850661834,2.54008299268659,2.27235358192189,1.40398589056729,1.36940807419915,1.88015874927628,2.50634477090067,0,2.56940920165919,5.65039180134933,1.27753871307098,1.37402137902306,0.307240764308458,1.56573275524691,0.667396566847634,2.73543333562856,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0,0.988823245360557,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0,0,3.06943422136123,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,1.56980256395025,0.831058409500782,1.1279783030859,0.784250137270958,0.839107934879214,0.189753732724185,0.635746315921515,0,0,0,0,0,0,0,3.85477467284809,3.70691816839509,3.34150238417457,0,0,0,0.547364367646998,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1970 | |||
|description=CAGE_peak_at_chr6:135505482..135505486,+ | |||
|id=chr6:135505482..135505486,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.64e-32!182;CL:0000037!2.14e-31!172;CL:0000566!2.14e-31!172;CL:0002032!8.40e-28!165;CL:0000837!8.40e-28!165;CL:0000763!2.16e-20!112;CL:0000049!2.16e-20!112;CL:0000738!9.29e-12!140;CL:0002031!1.20e-09!124;CL:0002274!1.57e-07!5;CL:0000457!1.57e-07!5;CL:0002191!1.57e-07!5;CL:0000097!1.57e-07!5;CL:0000831!1.57e-07!5;CL:0002028!1.57e-07!5;CL:0000542!3.37e-07!53;CL:0000051!3.37e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.02e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.15e-19,177;CL:0000037,7.07e-15,168;CL:0000763,2.08e-14,108;CL:0000049,2.08e-14,108;CL:0002032,4.14e-14,161;CL:0000837,4.14e-14,161;CL:0000784,8.58e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.62e-08;1 | |||
|ontology_enrichment_disease=DOID:2531!3.44e-49!51;DOID:0060083!3.44e-49!51;DOID:1240!1.71e-45!39;DOID:8692!2.74e-35!31;DOID:0050686!3.39e-17!137;DOID:1036!5.59e-12!8;DOID:0060058!3.57e-10!10;DOID:162!2.16e-09!235;DOID:14566!7.42e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.37e-46;39!DOID:8692;3.13e-44;31!DOID:2531;2.67e-27;51!DOID:0060083;2.67e-27;51!DOID:1036;6.10e-08;8!DOID:225;6.62e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.70e-58,39;DOID:8692,9.83e-46,31;DOID:2531,1.57e-43,51;DOID:0060083,1.57e-43,51;DOID:0050686,1.01e-13,137;DOID:225,6.19e-08,1;DOID:1036,7.77e-08,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.62e-08;1!UBERON:0001785;6.62e-08;1!UBERON:0002464;6.62e-08;1!UBERON:0004904;6.62e-08;1!UBERON:0001021;6.62e-08;1!UBERON:0002331;7.38e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.63e-08,1;UBERON:0001785,6.63e-08,1;UBERON:0002464,6.63e-08,1;UBERON:0004904,6.63e-08,1;UBERON:0001021,6.63e-08,1;UBERON:0003902,6.63e-08,1;UBERON:0005425,6.63e-08,1;UBERON:0002331,7.17e-07,10;UBERON:0000358,7.17e-07,10;UBERON:0000307,7.17e-07,10;UBERON:0000091,7.17e-07,10;UBERON:0000087,7.17e-07,10;UBERON:0007010,7.17e-07,10;UBERON:0007806,7.17e-07,10;UBERON:0008780,7.17e-07,10;UBERON:0005728,7.17e-07,10 | |||
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|short_description=p@chr6:135505482..135505486,+ | |||
}} |
Revision as of 18:08, 13 September 2013
Short description: | p@chr6:135505482..135505486, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:135505482..135505486, + |
Coexpression cluster: | C1970_biphenotypic_acute_non_chronic_myelodysplastic_cord_Hodgkin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.15e-19 | 177 |
hematopoietic stem cell | 7.07e-15 | 168 |
myeloid cell | 2.08e-14 | 108 |
common myeloid progenitor | 2.08e-14 | 108 |
hematopoietic oligopotent progenitor cell | 4.14e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.14e-14 | 161 |
plasmacytoid dendritic cell | 8.58e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.63e-08 | 1 |
cranial nerve | 6.63e-08 | 1 |
nerve trunk | 6.63e-08 | 1 |
nerve connecting eye with brain | 6.63e-08 | 1 |
nerve | 6.63e-08 | 1 |
retinal neural layer | 6.63e-08 | 1 |
presumptive neural retina | 6.63e-08 | 1 |
umbilical cord | 7.17e-07 | 10 |
blastocyst | 7.17e-07 | 10 |
blastula | 7.17e-07 | 10 |
bilaminar disc | 7.17e-07 | 10 |
inner cell mass | 7.17e-07 | 10 |
cleaving embryo | 7.17e-07 | 10 |
connecting stalk | 7.17e-07 | 10 |
inner cell mass derived epiblast | 7.17e-07 | 10 |
extraembryonic mesoderm | 7.17e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.70e-58 | 39 |
myeloid leukemia | 9.83e-46 | 31 |
hematologic cancer | 1.57e-43 | 51 |
immune system cancer | 1.57e-43 | 51 |
organ system cancer | 1.01e-13 | 137 |
syndrome | 6.19e-08 | 1 |
chronic leukemia | 7.77e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.