FFCP PHASE1:Hg19::chr6:30131287..30131298,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89870|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16284|TSSclassifier=N|UniProt=A6NL11|association_with_transcript=-163bp_to_ENST00000376688_5end|description=CAGE_peak_2_at_TRIM15_5end|id=chr6:30131287..30131298,+|ontology_enrichment_celltype=CL:0000181!5.06e-18!12;CL:0000417!5.06e-18!12;CL:0000668!5.06e-18!12;CL:0000414!5.06e-18!12;CL:0000412!5.06e-18!12;CL:0000182!5.06e-18!12;CL:0000223!5.92e-14!59;CL:0002178!6.36e-07!3|ontology_enrichment_celltype_v019=CL:0000182;6.16e-17;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.22e-17,12;CL:0000223,6.61e-10,58|ontology_enrichment_development_v019=UBERON:0004161;2.67e-18;11!UBERON:0009497;1.55e-15;13!UBERON:0003104;6.19e-10;31!CL:0000223;4.77e-08;58!UBERON:0001041;7.34e-07;30!UBERON:0006595;8.09e-07;86|ontology_enrichment_disease=DOID:305!1.02e-10!106;DOID:299!3.31e-10!25;DOID:4929!9.97e-10!2;DOID:3119!7.94e-08!14;DOID:0050687!6.84e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009497!1.05e-27!25;UBERON:0000015!1.05e-27!25;UBERON:0002423!1.05e-27!25;UBERON:0006235!1.05e-27!25;UBERON:0004161!1.05e-27!25;UBERON:0009854!7.80e-26!23;UBERON:0005409!1.66e-25!35;UBERON:0000160!2.92e-25!27;UBERON:0008835!1.08e-22!22;UBERON:0003894!1.08e-22!22;UBERON:0009856!1.47e-22!26;UBERON:0007499!1.06e-19!25;UBERON:0004921!2.01e-19!129;UBERON:0004185!2.01e-19!129;UBERON:0001007!5.11e-18!155;UBERON:0001555!5.11e-18!155;UBERON:0007026!5.11e-18!155;UBERON:0003929!8.18e-18!54;UBERON:0004119!5.51e-16!169;UBERON:0000925!5.51e-16!169;UBERON:0006595!5.51e-16!169;UBERON:0002294!1.98e-15!7;UBERON:0001173!1.98e-15!7;UBERON:0004912!1.98e-15!7;UBERON:0000059!6.41e-15!11;UBERON:0002107!2.32e-14!19;UBERON:0006925!2.32e-14!19;UBERON:0008836!2.32e-14!19;UBERON:0001155!6.65e-13!9;UBERON:0005911!5.48e-12!82;UBERON:0000077!1.35e-11!130;UBERON:0002108!1.73e-10!14;UBERON:0002394!3.19e-10!4;UBERON:0003928!3.19e-10!4;UBERON:0005057!3.84e-10!26;UBERON:0005172!2.10e-09!55;UBERON:0005173!2.10e-09!55;UBERON:0004907!6.89e-09!5;UBERON:0002365!2.68e-08!31;UBERON:0002330!2.68e-08!31;UBERON:0000949!2.79e-08!45;UBERON:0002417!3.05e-08!61;UBERON:0000916!3.05e-08!61;UBERON:0001041!4.23e-08!98;UBERON:0002368!3.32e-07!35;UBERON:0000481!5.97e-07!347;UBERON:0002110!6.55e-07!3;UBERON:0006242!6.55e-07!3|ontology_enrichment_uberon_v019=UBERON:0000160;2.73e-43;17!UBERON:0005409;1.34e-42;22!UBERON:0004921;1.16e-23;33!UBERON:0002108;2.66e-23;4!UBERON:0000059;2.67e-18;11!UBERON:0002107;2.36e-16;19!UBERON:0006925;2.36e-16;19!UBERON:0001155;4.79e-13;9!UBERON:0002423;1.99e-12;25!UBERON:0001007;2.34e-12;81!UBERON:0002365;1.16e-09;31!UBERON:0002330;1.16e-09;31!UBERON:0001555;1.62e-08;54!UBERON:0002368;5.11e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.02e-43,17;UBERON:0005409,1.31e-37,25;UBERON:0002108,2.77e-23,4;UBERON:0004921,9.15e-22,118;UBERON:0000059,2.09e-18,11;UBERON:0001007,1.99e-17,145;UBERON:0001555,1.99e-17,145;UBERON:0007026,1.99e-17,145;UBERON:0002107,2.32e-16,19;UBERON:0006925,2.32e-16,19;UBERON:0008836,2.32e-16,19;UBERON:0004119,1.21e-15,160;UBERON:0000925,1.21e-15,160;UBERON:0006595,1.21e-15,160;UBERON:0008835,3.95e-14,22;UBERON:0003894,3.95e-14,22;UBERON:0009854,1.63e-13,23;UBERON:0001155,4.23e-13,9;UBERON:0007499,1.97e-12,25;UBERON:0009497,1.97e-12,25;UBERON:0000015,1.97e-12,25;UBERON:0002423,1.97e-12,25;UBERON:0006235,1.97e-12,25;UBERON:0004161,1.97e-12,25;UBERON:0011216,2.82e-12,223;UBERON:0009856,5.95e-12,26;UBERON:0003929,1.09e-10,54;UBERON:0002365,5.14e-10,31;UBERON:0002330,5.14e-10,31;UBERON:0002368,7.33e-09,35;UBERON:0002530,2.96e-07,59;UBERON:0000949,7.21e-07,45;UBERON:0005911,7.87e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.503865495708552,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89870 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16284 | |||
|TSSclassifier=N | |||
|UniProt=A6NL11 | |||
|association_with_transcript=-163bp_to_ENST00000376688_5end | |||
|description=CAGE_peak_2_at_TRIM15_5end | |||
|id=chr6:30131287..30131298,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.06e-18!12;CL:0000417!5.06e-18!12;CL:0000668!5.06e-18!12;CL:0000414!5.06e-18!12;CL:0000412!5.06e-18!12;CL:0000182!5.06e-18!12;CL:0000223!5.92e-14!59;CL:0002178!6.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.16e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.22e-17,12;CL:0000223,6.61e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.67e-18;11!UBERON:0009497;1.55e-15;13!UBERON:0003104;6.19e-10;31!CL:0000223;4.77e-08;58!UBERON:0001041;7.34e-07;30!UBERON:0006595;8.09e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.02e-10!106;DOID:299!3.31e-10!25;DOID:4929!9.97e-10!2;DOID:3119!7.94e-08!14;DOID:0050687!6.84e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.05e-27!25;UBERON:0000015!1.05e-27!25;UBERON:0002423!1.05e-27!25;UBERON:0006235!1.05e-27!25;UBERON:0004161!1.05e-27!25;UBERON:0009854!7.80e-26!23;UBERON:0005409!1.66e-25!35;UBERON:0000160!2.92e-25!27;UBERON:0008835!1.08e-22!22;UBERON:0003894!1.08e-22!22;UBERON:0009856!1.47e-22!26;UBERON:0007499!1.06e-19!25;UBERON:0004921!2.01e-19!129;UBERON:0004185!2.01e-19!129;UBERON:0001007!5.11e-18!155;UBERON:0001555!5.11e-18!155;UBERON:0007026!5.11e-18!155;UBERON:0003929!8.18e-18!54;UBERON:0004119!5.51e-16!169;UBERON:0000925!5.51e-16!169;UBERON:0006595!5.51e-16!169;UBERON:0002294!1.98e-15!7;UBERON:0001173!1.98e-15!7;UBERON:0004912!1.98e-15!7;UBERON:0000059!6.41e-15!11;UBERON:0002107!2.32e-14!19;UBERON:0006925!2.32e-14!19;UBERON:0008836!2.32e-14!19;UBERON:0001155!6.65e-13!9;UBERON:0005911!5.48e-12!82;UBERON:0000077!1.35e-11!130;UBERON:0002108!1.73e-10!14;UBERON:0002394!3.19e-10!4;UBERON:0003928!3.19e-10!4;UBERON:0005057!3.84e-10!26;UBERON:0005172!2.10e-09!55;UBERON:0005173!2.10e-09!55;UBERON:0004907!6.89e-09!5;UBERON:0002365!2.68e-08!31;UBERON:0002330!2.68e-08!31;UBERON:0000949!2.79e-08!45;UBERON:0002417!3.05e-08!61;UBERON:0000916!3.05e-08!61;UBERON:0001041!4.23e-08!98;UBERON:0002368!3.32e-07!35;UBERON:0000481!5.97e-07!347;UBERON:0002110!6.55e-07!3;UBERON:0006242!6.55e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.73e-43;17!UBERON:0005409;1.34e-42;22!UBERON:0004921;1.16e-23;33!UBERON:0002108;2.66e-23;4!UBERON:0000059;2.67e-18;11!UBERON:0002107;2.36e-16;19!UBERON:0006925;2.36e-16;19!UBERON:0001155;4.79e-13;9!UBERON:0002423;1.99e-12;25!UBERON:0001007;2.34e-12;81!UBERON:0002365;1.16e-09;31!UBERON:0002330;1.16e-09;31!UBERON:0001555;1.62e-08;54!UBERON:0002368;5.11e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.02e-43,17;UBERON:0005409,1.31e-37,25;UBERON:0002108,2.77e-23,4;UBERON:0004921,9.15e-22,118;UBERON:0000059,2.09e-18,11;UBERON:0001007,1.99e-17,145;UBERON:0001555,1.99e-17,145;UBERON:0007026,1.99e-17,145;UBERON:0002107,2.32e-16,19;UBERON:0006925,2.32e-16,19;UBERON:0008836,2.32e-16,19;UBERON:0004119,1.21e-15,160;UBERON:0000925,1.21e-15,160;UBERON:0006595,1.21e-15,160;UBERON:0008835,3.95e-14,22;UBERON:0003894,3.95e-14,22;UBERON:0009854,1.63e-13,23;UBERON:0001155,4.23e-13,9;UBERON:0007499,1.97e-12,25;UBERON:0009497,1.97e-12,25;UBERON:0000015,1.97e-12,25;UBERON:0002423,1.97e-12,25;UBERON:0006235,1.97e-12,25;UBERON:0004161,1.97e-12,25;UBERON:0011216,2.82e-12,223;UBERON:0009856,5.95e-12,26;UBERON:0003929,1.09e-10,54;UBERON:0002365,5.14e-10,31;UBERON:0002330,5.14e-10,31;UBERON:0002368,7.33e-09,35;UBERON:0002530,2.96e-07,59;UBERON:0000949,7.21e-07,45;UBERON:0005911,7.87e-07,82 | |||
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|short_description=p2@TRIM15 | |||
}} |
Revision as of 19:59, 13 September 2013
Short description: | p2@TRIM15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRIM15_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_ENST00000376688_5end |
EntrezGene: | TRIM15 |
HGNC: | 16284 |
UniProt: | A6NL11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.22e-17 | 12 |
endodermal cell | 6.61e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.02e-43 | 17 |
gastrointestinal system | 1.31e-37 | 25 |
small intestine | 2.77e-23 | 4 |
subdivision of digestive tract | 9.15e-22 | 118 |
large intestine | 2.09e-18 | 11 |
digestive system | 1.99e-17 | 145 |
digestive tract | 1.99e-17 | 145 |
primitive gut | 1.99e-17 | 145 |
liver | 2.32e-16 | 19 |
digestive gland | 2.32e-16 | 19 |
liver bud | 2.32e-16 | 19 |
endoderm-derived structure | 1.21e-15 | 160 |
endoderm | 1.21e-15 | 160 |
presumptive endoderm | 1.21e-15 | 160 |
hepatic diverticulum | 3.95e-14 | 22 |
liver primordium | 3.95e-14 | 22 |
digestive tract diverticulum | 1.63e-13 | 23 |
colon | 4.23e-13 | 9 |
epithelial sac | 1.97e-12 | 25 |
epithelium of foregut-midgut junction | 1.97e-12 | 25 |
anatomical boundary | 1.97e-12 | 25 |
hepatobiliary system | 1.97e-12 | 25 |
foregut-midgut junction | 1.97e-12 | 25 |
septum transversum | 1.97e-12 | 25 |
organ system subdivision | 2.82e-12 | 223 |
sac | 5.95e-12 | 26 |
gut epithelium | 1.09e-10 | 54 |
exocrine gland | 5.14e-10 | 31 |
exocrine system | 5.14e-10 | 31 |
endocrine gland | 7.33e-09 | 35 |
gland | 2.96e-07 | 59 |
endocrine system | 7.21e-07 | 45 |
endo-epithelium | 7.87e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.