FFCP PHASE1:Hg19::chr6:57037165..57037172,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9532|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=938|TSSclassifier=S|UniProt=O95816|association_with_transcript=41bp_to_ENST00000370693_5end|description=CAGE_peak_6_at_BAG2_5end|id=chr6:57037165..57037172,+|ontology_enrichment_celltype=CL:0000055!3.53e-17!180;CL:0002620!3.53e-13!23;CL:0000057!6.26e-12!75;CL:0000048!8.34e-07!430|ontology_enrichment_celltype_v019=CL:0002620;3.12e-19;23!CL:0000499;3.30e-13;28!CL:0002622;2.19e-10;3!CL:0000135;1.32e-09;3!CL:0000388;1.32e-09;3!CL:0000153;2.58e-08;9!CL:0000447;2.58e-08;9!CL:0002556;2.70e-08;6!CL:1000487;2.36e-07;2|ontology_enrichment_celltype_v019_2=CL:0002620,2.71e-19,23;CL:0000057,4.80e-18,76;CL:0000499,1.73e-13,28;CL:0002622,3.36e-10,3;CL:0000135,5.31e-10,3;CL:0000388,5.31e-10,3;CL:0000048,1.07e-09,427;CL:0000723,2.20e-09,433;CL:0000034,5.61e-09,441;CL:0000153,1.55e-08,9;CL:0000447,1.55e-08,9;CL:0002556,2.40e-08,6;CL:1000487,2.53e-07,2;CL:0002320,5.40e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.04e-09;5!DOID:450;1.04e-09;5!DOID:66;1.04e-09;5!DOID:423;1.04e-09;5!DOID:0080000;1.04e-09;5!DOID:11722;1.04e-09;5|ontology_enrichment_disease_v019_2=DOID:17,1.30e-09,5;DOID:450,1.30e-09,5;DOID:66,1.30e-09,5;DOID:423,1.30e-09,5;DOID:0080000,1.30e-09,5;DOID:11722,1.30e-09,5|ontology_enrichment_uberon=UBERON:0000914!5.78e-08!83;UBERON:0002329!5.78e-08!83;UBERON:0003077!5.78e-08!83;UBERON:0003059!5.78e-08!83;UBERON:0007282!5.78e-08!83;UBERON:0009618!5.78e-08!83;UBERON:0007285!5.78e-08!83;UBERON:0002097!1.04e-07!40|ontology_enrichment_uberon_v019=UBERON:0007846;1.32e-09;3!UBERON:0000043;1.32e-09;3!UBERON:0007845;1.32e-09;3!UBERON:0002097;2.01e-09;41!UBERON:0001434;1.48e-08;36!UBERON:0001758;2.70e-08;6!UBERON:0003672;2.70e-08;6!UBERON:0000075;3.21e-08;16!UBERON:0004457;4.09e-08;9!UBERON:0000042;4.09e-08;9!UBERON:0002199;1.49e-07;46!UBERON:0002416;1.49e-07;46!UBERON:0003129;4.17e-07;7!UBERON:0002367;4.64e-07;11!UBERON:0010147;4.64e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.67e-15,99;UBERON:0002097,7.95e-13,41;UBERON:0002199,4.84e-11,46;UBERON:0002416,4.84e-11,46;UBERON:0007846,5.31e-10,3;UBERON:0000043,5.31e-10,3;UBERON:0007845,5.31e-10,3;UBERON:0001758,2.40e-08,6;UBERON:0003672,2.40e-08,6;UBERON:0000075,4.16e-08,16;UBERON:0003129,3.77e-07,7;UBERON:0002367,5.71e-07,11;UBERON:0010147,5.71e-07,11;UBERON:0009846,5.71e-07,11;UBERON:0003353,5.71e-07,11;UBERON:0004902,5.71e-07,11;UBERON:0003820,5.71e-07,11;UBERON:0009847,5.71e-07,11;UBERON:0011137,6.55e-07,14|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.74259811776028,2.65117900582333,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.410502947249729,0.550975469195755,0,0,0,0,0,0.369754010166788,0.232401601740905,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,2.89151321907653,1.50401373190767,2.89693037921647,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0.570471821544449,0.448346041655403,0,0.647491777472526,1.12360645361799,0.204154171254893,0,0.723280468230358,2.37600571456411,4.20353779773547,0,0,0.168336113954066,0.375355559615893,1.10825646193673,3.07284334616587,1.83892677479412,2.70428506031874,0,0.538168907066586,1.06778694409284,4.87443372666992,1.50045548042201,1.44273540933814,2.83404594050192,4.65292140828975,1.18143432568886,1.75386609290158,0.504867548488229,2.11714766877288,0.969876340912871,3.90510551768276,2.51880245569101,1.86516651541536,0,0,0,0.243947412259191,0.132529768321485,0,0.414644220061482,0,0,0,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.591534000199219,0.505754070234305,0.964044119533928,1.21323370005633,0.871517776369625,0.949082476444386,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.4400297149257,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,0,0,1.30303176000821,0.821905290201534,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=938 | |||
|TSSclassifier=S | |||
|UniProt=O95816 | |||
|association_with_transcript=41bp_to_ENST00000370693_5end | |||
|description=CAGE_peak_6_at_BAG2_5end | |||
|id=chr6:57037165..57037172,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.53e-17!180;CL:0002620!3.53e-13!23;CL:0000057!6.26e-12!75;CL:0000048!8.34e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.12e-19;23!CL:0000499;3.30e-13;28!CL:0002622;2.19e-10;3!CL:0000135;1.32e-09;3!CL:0000388;1.32e-09;3!CL:0000153;2.58e-08;9!CL:0000447;2.58e-08;9!CL:0002556;2.70e-08;6!CL:1000487;2.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.71e-19,23;CL:0000057,4.80e-18,76;CL:0000499,1.73e-13,28;CL:0002622,3.36e-10,3;CL:0000135,5.31e-10,3;CL:0000388,5.31e-10,3;CL:0000048,1.07e-09,427;CL:0000723,2.20e-09,433;CL:0000034,5.61e-09,441;CL:0000153,1.55e-08,9;CL:0000447,1.55e-08,9;CL:0002556,2.40e-08,6;CL:1000487,2.53e-07,2;CL:0002320,5.40e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.04e-09;5!DOID:450;1.04e-09;5!DOID:66;1.04e-09;5!DOID:423;1.04e-09;5!DOID:0080000;1.04e-09;5!DOID:11722;1.04e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.30e-09,5;DOID:450,1.30e-09,5;DOID:66,1.30e-09,5;DOID:423,1.30e-09,5;DOID:0080000,1.30e-09,5;DOID:11722,1.30e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.78e-08!83;UBERON:0002329!5.78e-08!83;UBERON:0003077!5.78e-08!83;UBERON:0003059!5.78e-08!83;UBERON:0007282!5.78e-08!83;UBERON:0009618!5.78e-08!83;UBERON:0007285!5.78e-08!83;UBERON:0002097!1.04e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.32e-09;3!UBERON:0000043;1.32e-09;3!UBERON:0007845;1.32e-09;3!UBERON:0002097;2.01e-09;41!UBERON:0001434;1.48e-08;36!UBERON:0001758;2.70e-08;6!UBERON:0003672;2.70e-08;6!UBERON:0000075;3.21e-08;16!UBERON:0004457;4.09e-08;9!UBERON:0000042;4.09e-08;9!UBERON:0002199;1.49e-07;46!UBERON:0002416;1.49e-07;46!UBERON:0003129;4.17e-07;7!UBERON:0002367;4.64e-07;11!UBERON:0010147;4.64e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.67e-15,99;UBERON:0002097,7.95e-13,41;UBERON:0002199,4.84e-11,46;UBERON:0002416,4.84e-11,46;UBERON:0007846,5.31e-10,3;UBERON:0000043,5.31e-10,3;UBERON:0007845,5.31e-10,3;UBERON:0001758,2.40e-08,6;UBERON:0003672,2.40e-08,6;UBERON:0000075,4.16e-08,16;UBERON:0003129,3.77e-07,7;UBERON:0002367,5.71e-07,11;UBERON:0010147,5.71e-07,11;UBERON:0009846,5.71e-07,11;UBERON:0003353,5.71e-07,11;UBERON:0004902,5.71e-07,11;UBERON:0003820,5.71e-07,11;UBERON:0009847,5.71e-07,11;UBERON:0011137,6.55e-07,14 | |||
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| |||
|short_description=p6@BAG2 | |||
}} |
Revision as of 21:32, 13 September 2013
Short description: | p6@BAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_BAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000370693_5end |
EntrezGene: | BAG2 |
HGNC: | 938 |
UniProt: | O95816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.71e-19 | 23 |
fibroblast | 4.80e-18 | 76 |
stromal cell | 1.73e-13 | 28 |
prostate stromal cell | 3.36e-10 | 3 |
fibrocyte | 5.31e-10 | 3 |
tendon cell | 5.31e-10 | 3 |
multi fate stem cell | 1.07e-09 | 427 |
somatic stem cell | 2.20e-09 | 433 |
stem cell | 5.61e-09 | 441 |
GAG secreting cell | 1.55e-08 | 9 |
carbohydrate secreting cell | 1.55e-08 | 9 |
fibroblast of periodontium | 2.40e-08 | 6 |
smooth muscle cell of prostate | 2.53e-07 | 2 |
connective tissue cell | 5.40e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.67e-15 | 99 |
skin of body | 7.95e-13 | 41 |
integument | 4.84e-11 | 46 |
integumental system | 4.84e-11 | 46 |
dense regular connective tissue | 5.31e-10 | 3 |
tendon | 5.31e-10 | 3 |
regular connective tissue | 5.31e-10 | 3 |
periodontium | 2.40e-08 | 6 |
dentition | 2.40e-08 | 6 |
subdivision of skeletal system | 4.16e-08 | 16 |
skull | 3.77e-07 | 7 |
prostate gland | 5.71e-07 | 11 |
male accessory sex gland | 5.71e-07 | 11 |
embryonic cloacal epithelium | 5.71e-07 | 11 |
epithelium of hindgut | 5.71e-07 | 11 |
urogenital sinus epithelium | 5.71e-07 | 11 |
prostate bud | 5.71e-07 | 11 |
prostate field | 5.71e-07 | 11 |
axial skeletal system | 6.55e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.30e-09 | 5 |
myotonic disease | 1.30e-09 | 5 |
muscle tissue disease | 1.30e-09 | 5 |
myopathy | 1.30e-09 | 5 |
muscular disease | 1.30e-09 | 5 |
myotonic dystrophy | 1.30e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.