FFCP PHASE1:Mm9::chr2:55288214..55288227,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16519|HGNC=|MCL_coexpression_id=1|UniProt=P63250|association_with_transcript=-153bp_to_ENSMUST00000067101_5end|description=CAGE_peak_5_at_Kcnj3_5end|id=chr2:55288214..55288227,+|ontology_enrichment_celltype=CL:0000117!3.99e-15!23;CL:0000337!3.99e-15!23;CL:0000540!9.63e-15!33;CL:0000047!9.63e-15!33;CL:0000031!9.63e-15!33;CL:0000404!9.63e-15!33;CL:0000393!5.63e-11!39;CL:0000211!5.63e-11!39;CL:0002319!4.21e-09!43;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,8.35e-11,23;CL:0000337,8.35e-11,23;CL:0000540,4.14e-08,33;CL:0000047,4.14e-08,33;CL:0000031,4.14e-08,33;CL:0000404,4.14e-08,33;CL:0002610,1.68e-07,3;CL:0002614,6.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.03e-25!73;UBERON:0005743!4.03e-25!73;UBERON:0000073!6.52e-24!75;UBERON:0001016!6.52e-24!75;UBERON:0001049!2.16e-21!52;UBERON:0005068!2.16e-21!52;UBERON:0006241!2.16e-21!52;UBERON:0007135!2.16e-21!52;UBERON:0000033!4.72e-21!63;UBERON:0002020!1.12e-20!34;UBERON:0000955!3.51e-20!50;UBERON:0006238!3.51e-20!50;UBERON:0002616!1.93e-19!49;UBERON:0004121!3.82e-18!102;UBERON:0000924!3.82e-18!102;UBERON:0006601!3.82e-18!102;UBERON:0002346!6.08e-17!71;UBERON:0003075!6.08e-17!71;UBERON:0007284!6.08e-17!71;UBERON:0002791!6.90e-17!29;UBERON:0003528!6.90e-17!29;UBERON:0001893!6.90e-17!29;UBERON:0003056!3.74e-16!49;UBERON:0003080!4.31e-15!40;UBERON:0002780!2.96e-14!39;UBERON:0001890!2.96e-14!39;UBERON:0006240!2.96e-14!39;UBERON:0000956!3.95e-13!21;UBERON:0001869!3.95e-13!21;UBERON:0000203!3.95e-13!21;UBERON:0000025!6.03e-13!114;UBERON:0004111!4.10e-12!122;UBERON:0007811!1.15e-11!86;UBERON:0002021!3.29e-11!10;UBERON:0000411!3.29e-11!10;UBERON:0001950!3.29e-11!10;UBERON:0002619!2.27e-10!17;UBERON:0000153!2.18e-09!94;UBERON:0003076!4.35e-07!12;UBERON:0003057!4.35e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-34,54;UBERON:0001017,2.67e-33,73;UBERON:0001016,3.32e-32,75;UBERON:0001049,6.11e-31,52;UBERON:0005068,6.11e-31,52;UBERON:0006241,6.11e-31,52;UBERON:0007135,6.11e-31,52;UBERON:0002020,1.47e-25,34;UBERON:0000955,1.95e-25,47;UBERON:0006238,1.95e-25,47;UBERON:0002616,5.25e-24,46;UBERON:0002346,7.60e-24,64;UBERON:0003075,7.60e-24,64;UBERON:0007284,7.60e-24,64;UBERON:0004121,8.71e-24,95;UBERON:0000924,8.71e-24,95;UBERON:0006601,8.71e-24,95;UBERON:0002021,1.05e-23,10;UBERON:0000411,1.05e-23,10;UBERON:0001950,1.05e-23,10;UBERON:0003528,3.41e-20,29;UBERON:0002791,3.41e-20,29;UBERON:0001893,3.41e-20,29;UBERON:0010371,4.68e-20,73;UBERON:0010314,5.76e-20,92;UBERON:0003080,4.01e-19,40;UBERON:0002619,5.74e-19,17;UBERON:0002780,1.49e-17,39;UBERON:0001890,1.49e-17,39;UBERON:0006240,1.49e-17,39;UBERON:0000956,1.79e-17,21;UBERON:0001869,1.79e-17,21;UBERON:0000203,1.79e-17,21;UBERON:0003056,1.09e-14,49;UBERON:0000025,1.15e-14,114;UBERON:0004111,3.27e-13,122;UBERON:0003076,7.17e-13,12;UBERON:0003057,7.17e-13,12;UBERON:0002950,4.95e-09,4;UBERON:0001891,4.95e-09,4;UBERON:0009616,4.95e-09,4;UBERON:0010286,4.95e-09,4;UBERON:0002240,2.22e-08,6;UBERON:0005174,2.22e-08,6;UBERON:0001137,2.22e-08,6;UBERON:0011216,1.32e-07,194;UBERON:0004684,1.68e-07,3;UBERON:0002275,1.68e-07,3;UBERON:0000483,4.94e-07,174;UBERON:0002038,6.16e-07,3;UBERON:0009663,6.16e-07,3;UBERON:0009661,6.16e-07,3;UBERON:0000125,6.16e-07,3;UBERON:0002308,6.16e-07,3;UBERON:0000119,7.21e-07,176|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.841299845405528,1.14260393761521,1.32521124570968,0.367472397644862,0.383381884072945,0,2.20231761998777,3.19218345212969,1.38245879930619,0.395658863190582,0.457438218012048,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,1.17851434189467,1.99320353118744,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,1.75668478206928,2.30391377494801,0,0,0,0,2.54644086988199,1.37250180845588,0,2.43354048269187,3.3243009452943,1.0389402227978,1.94689515681309,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.36012412292203,0,0.787056926989615,0.462801338662135,0.465067889500816,0.268273401399619,0.700592054203017,1.31647879930784,0.820837320395476,0.891756905004413,1.31579988682799,1.97595103761946,1.74468344388483,3.57492912559016,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0,0,0,0,0,0,0,0,1.9266070798535,1.64096361229084,0,0,0,0,0,0.238968797952552,0.668396022247182,1.69845918473299,0,0.292255857911312,0.790575555893047,1.28528526568723,0.283880170416537,0,0,0,0,0,0,0,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| ||
|EntrezGene=16519 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P63250 | |||
|association_with_transcript=-153bp_to_ENSMUST00000067101_5end | |||
|description=CAGE_peak_5_at_Kcnj3_5end | |||
|id=chr2:55288214..55288227,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.99e-15!23;CL:0000337!3.99e-15!23;CL:0000540!9.63e-15!33;CL:0000047!9.63e-15!33;CL:0000031!9.63e-15!33;CL:0000404!9.63e-15!33;CL:0000393!5.63e-11!39;CL:0000211!5.63e-11!39;CL:0002319!4.21e-09!43;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.35e-11,23;CL:0000337,8.35e-11,23;CL:0000540,4.14e-08,33;CL:0000047,4.14e-08,33;CL:0000031,4.14e-08,33;CL:0000404,4.14e-08,33;CL:0002610,1.68e-07,3;CL:0002614,6.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.03e-25!73;UBERON:0005743!4.03e-25!73;UBERON:0000073!6.52e-24!75;UBERON:0001016!6.52e-24!75;UBERON:0001049!2.16e-21!52;UBERON:0005068!2.16e-21!52;UBERON:0006241!2.16e-21!52;UBERON:0007135!2.16e-21!52;UBERON:0000033!4.72e-21!63;UBERON:0002020!1.12e-20!34;UBERON:0000955!3.51e-20!50;UBERON:0006238!3.51e-20!50;UBERON:0002616!1.93e-19!49;UBERON:0004121!3.82e-18!102;UBERON:0000924!3.82e-18!102;UBERON:0006601!3.82e-18!102;UBERON:0002346!6.08e-17!71;UBERON:0003075!6.08e-17!71;UBERON:0007284!6.08e-17!71;UBERON:0002791!6.90e-17!29;UBERON:0003528!6.90e-17!29;UBERON:0001893!6.90e-17!29;UBERON:0003056!3.74e-16!49;UBERON:0003080!4.31e-15!40;UBERON:0002780!2.96e-14!39;UBERON:0001890!2.96e-14!39;UBERON:0006240!2.96e-14!39;UBERON:0000956!3.95e-13!21;UBERON:0001869!3.95e-13!21;UBERON:0000203!3.95e-13!21;UBERON:0000025!6.03e-13!114;UBERON:0004111!4.10e-12!122;UBERON:0007811!1.15e-11!86;UBERON:0002021!3.29e-11!10;UBERON:0000411!3.29e-11!10;UBERON:0001950!3.29e-11!10;UBERON:0002619!2.27e-10!17;UBERON:0000153!2.18e-09!94;UBERON:0003076!4.35e-07!12;UBERON:0003057!4.35e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.36e-34,54;UBERON:0001017,2.67e-33,73;UBERON:0001016,3.32e-32,75;UBERON:0001049,6.11e-31,52;UBERON:0005068,6.11e-31,52;UBERON:0006241,6.11e-31,52;UBERON:0007135,6.11e-31,52;UBERON:0002020,1.47e-25,34;UBERON:0000955,1.95e-25,47;UBERON:0006238,1.95e-25,47;UBERON:0002616,5.25e-24,46;UBERON:0002346,7.60e-24,64;UBERON:0003075,7.60e-24,64;UBERON:0007284,7.60e-24,64;UBERON:0004121,8.71e-24,95;UBERON:0000924,8.71e-24,95;UBERON:0006601,8.71e-24,95;UBERON:0002021,1.05e-23,10;UBERON:0000411,1.05e-23,10;UBERON:0001950,1.05e-23,10;UBERON:0003528,3.41e-20,29;UBERON:0002791,3.41e-20,29;UBERON:0001893,3.41e-20,29;UBERON:0010371,4.68e-20,73;UBERON:0010314,5.76e-20,92;UBERON:0003080,4.01e-19,40;UBERON:0002619,5.74e-19,17;UBERON:0002780,1.49e-17,39;UBERON:0001890,1.49e-17,39;UBERON:0006240,1.49e-17,39;UBERON:0000956,1.79e-17,21;UBERON:0001869,1.79e-17,21;UBERON:0000203,1.79e-17,21;UBERON:0003056,1.09e-14,49;UBERON:0000025,1.15e-14,114;UBERON:0004111,3.27e-13,122;UBERON:0003076,7.17e-13,12;UBERON:0003057,7.17e-13,12;UBERON:0002950,4.95e-09,4;UBERON:0001891,4.95e-09,4;UBERON:0009616,4.95e-09,4;UBERON:0010286,4.95e-09,4;UBERON:0002240,2.22e-08,6;UBERON:0005174,2.22e-08,6;UBERON:0001137,2.22e-08,6;UBERON:0011216,1.32e-07,194;UBERON:0004684,1.68e-07,3;UBERON:0002275,1.68e-07,3;UBERON:0000483,4.94e-07,174;UBERON:0002038,6.16e-07,3;UBERON:0009663,6.16e-07,3;UBERON:0009661,6.16e-07,3;UBERON:0000125,6.16e-07,3;UBERON:0002308,6.16e-07,3;UBERON:0000119,7.21e-07,176 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.540023753326763,0.841299845405528,1.14260393761521,1.32521124570968,0.367472397644862,0.383381884072945,0,2.20231761998777,3.19218345212969,1.38245879930619,0.395658863190582,0.457438218012048,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,1.17851434189467,1.99320353118744,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,1.75668478206928,2.30391377494801,0,0,0,0,2.54644086988199,1.37250180845588,0,2.43354048269187,3.3243009452943,1.0389402227978,1.94689515681309,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.12811372028485,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.36012412292203,0,0.787056926989615,0.462801338662135,0.465067889500816,0.268273401399619,0.700592054203017,1.31647879930784,0.820837320395476,0.891756905004413,1.31579988682799,1.97595103761946,1.74468344388483,3.57492912559016,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0,0,0,0,0,0,0,0,1.9266070798535,1.64096361229084,0,0,0,0,0,0.238968797952552,0.668396022247182,1.69845918473299,0,0.292255857911312,0.790575555893047,1.28528526568723,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.330916980914195,0.777804753376191,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,3.3885110557024,6.90487854760765,4.01026859407578,6.01486138202907,3.42541259885321,3.7769694869485,5.40018000185445,3.15224842256954,1.35942722695261,3.10656187051092,0,0,0,0,0.419226325255965,0,0,0.824140228955577,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.448176066834085,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0.476872379894642,0.872078499793971,0.0941093804153306,0.423073039458382,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p5@Kcnj3 | |||
}} |
Revision as of 00:08, 14 September 2013
Short description: | p5@Kcnj3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kcnj3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -153bp_to_ENSMUST00000067101_5end |
EntrezGene: | Kcnj3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.35e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.35e-11 | 23 |
neuron | 4.14e-08 | 33 |
neuronal stem cell | 4.14e-08 | 33 |
neuroblast | 4.14e-08 | 33 |
electrically signaling cell | 4.14e-08 | 33 |
raphe nuclei neuron | 1.68e-07 | 3 |
neuron of the substantia nigra | 6.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.