FFCP PHASE1:Mm9::chr3:106904185..106904199,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16490|HGNC=|MCL_coexpression_id=121|UniProt=P63141,B2RS05,Q3TZ64|association_with_transcript=-285bp_to_ENSMUST00000038695,NM_008417,uc008qws.1_5end|description=CAGE_peak_3_at_Kcna2_5end|id=chr3:106904185..106904199,+|ontology_enrichment_celltype=CL:0000117!1.58e-08!23;CL:0000337!1.58e-08!23;CL:0000540!9.06e-08!33;CL:0000047!9.06e-08!33;CL:0000031!9.06e-08!33;CL:0000404!9.06e-08!33|ontology_enrichment_celltype_v019_2=CL:0002610,6.31e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.61e-17!102;UBERON:0000924!4.61e-17!102;UBERON:0006601!4.61e-17!102;UBERON:0001017!1.14e-16!73;UBERON:0005743!1.14e-16!73;UBERON:0000073!1.14e-16!75;UBERON:0001016!1.14e-16!75;UBERON:0000033!1.25e-16!63;UBERON:0002346!1.83e-16!71;UBERON:0003075!1.83e-16!71;UBERON:0007284!1.83e-16!71;UBERON:0000955!3.20e-16!50;UBERON:0006238!3.20e-16!50;UBERON:0001049!1.49e-15!52;UBERON:0005068!1.49e-15!52;UBERON:0006241!1.49e-15!52;UBERON:0007135!1.49e-15!52;UBERON:0002616!1.98e-15!49;UBERON:0002020!3.48e-13!34;UBERON:0003056!7.40e-12!49;UBERON:0002791!1.40e-11!29;UBERON:0003528!1.40e-11!29;UBERON:0001893!1.40e-11!29;UBERON:0003080!3.58e-11!40;UBERON:0007811!1.13e-10!86;UBERON:0002780!2.09e-10!39;UBERON:0001890!2.09e-10!39;UBERON:0006240!2.09e-10!39;UBERON:0000153!3.10e-10!94;UBERON:0002021!1.33e-08!10;UBERON:0000411!1.33e-08!10;UBERON:0001950!1.33e-08!10;UBERON:0000956!6.99e-08!21;UBERON:0001869!6.99e-08!21;UBERON:0000203!6.99e-08!21;UBERON:0002619!2.00e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-23,54;UBERON:0000955,8.60e-22,47;UBERON:0006238,8.60e-22,47;UBERON:0001017,1.58e-20,73;UBERON:0001016,7.04e-20,75;UBERON:0002616,1.08e-19,46;UBERON:0001049,2.39e-19,52;UBERON:0005068,2.39e-19,52;UBERON:0006241,2.39e-19,52;UBERON:0007135,2.39e-19,52;UBERON:0002346,4.39e-15,64;UBERON:0003075,4.39e-15,64;UBERON:0007284,4.39e-15,64;UBERON:0004121,7.11e-15,95;UBERON:0000924,7.11e-15,95;UBERON:0006601,7.11e-15,95;UBERON:0010371,8.39e-13,73;UBERON:0003080,1.05e-12,40;UBERON:0004684,6.31e-12,3;UBERON:0002275,6.31e-12,3;UBERON:0002780,6.75e-11,39;UBERON:0001890,6.75e-11,39;UBERON:0006240,6.75e-11,39;UBERON:0003528,1.69e-10,29;UBERON:0002791,1.69e-10,29;UBERON:0001893,1.69e-10,29;UBERON:0004733,1.79e-10,6;UBERON:0004732,1.79e-10,6;UBERON:0002028,1.79e-10,6;UBERON:0007277,1.79e-10,6;UBERON:0003056,6.27e-10,49;UBERON:0010314,1.90e-09,92;UBERON:0002950,4.14e-09,4;UBERON:0001891,4.14e-09,4;UBERON:0009616,4.14e-09,4;UBERON:0010286,4.14e-09,4;UBERON:0002020,1.03e-08,34;UBERON:0001896,2.30e-08,2;UBERON:0002298,2.30e-08,2;UBERON:0005290,2.30e-08,2;UBERON:0010096,2.30e-08,2;UBERON:0002021,2.52e-08,10;UBERON:0000411,2.52e-08,10;UBERON:0001950,2.52e-08,10;UBERON:0003076,9.81e-08,12;UBERON:0003057,9.81e-08,12;UBERON:0000956,3.21e-07,21;UBERON:0001869,3.21e-07,21;UBERON:0000203,3.21e-07,21;UBERON:0000025,5.85e-07,114;UBERON:0007023,7.07e-07,51|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.287536413054709,0,2.20231761998777,2.29837208553338,1.84327839907492,0.395658863190582,0.274462930807229,0.52091337055676,0.837548997004143,2.25105044012672,1.68078072554491,0.883885756421003,0,0.931997229126503,0,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0,1.8125651855302,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,3.51336956413857,3.35114730901528,0,0,0,0,3.89455662452539,2.28750301409313,0,2.08589184230732,1.02286182932132,2.28566849015516,1.1356888414743,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.512454881139399,0.374806898238915,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.411618449517138,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0,0.780534591431195,0.472905432318573,0,0,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0,2.0871576698413,1.87538698547525,0,0,0,0,0.430846795465598,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,1.8542530201051,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11735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| ||
|EntrezGene=16490 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|UniProt=P63141,B2RS05,Q3TZ64 | |||
|association_with_transcript=-285bp_to_ENSMUST00000038695,NM_008417,uc008qws.1_5end | |||
|description=CAGE_peak_3_at_Kcna2_5end | |||
|id=chr3:106904185..106904199,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.58e-08!23;CL:0000337!1.58e-08!23;CL:0000540!9.06e-08!33;CL:0000047!9.06e-08!33;CL:0000031!9.06e-08!33;CL:0000404!9.06e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.31e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.61e-17!102;UBERON:0000924!4.61e-17!102;UBERON:0006601!4.61e-17!102;UBERON:0001017!1.14e-16!73;UBERON:0005743!1.14e-16!73;UBERON:0000073!1.14e-16!75;UBERON:0001016!1.14e-16!75;UBERON:0000033!1.25e-16!63;UBERON:0002346!1.83e-16!71;UBERON:0003075!1.83e-16!71;UBERON:0007284!1.83e-16!71;UBERON:0000955!3.20e-16!50;UBERON:0006238!3.20e-16!50;UBERON:0001049!1.49e-15!52;UBERON:0005068!1.49e-15!52;UBERON:0006241!1.49e-15!52;UBERON:0007135!1.49e-15!52;UBERON:0002616!1.98e-15!49;UBERON:0002020!3.48e-13!34;UBERON:0003056!7.40e-12!49;UBERON:0002791!1.40e-11!29;UBERON:0003528!1.40e-11!29;UBERON:0001893!1.40e-11!29;UBERON:0003080!3.58e-11!40;UBERON:0007811!1.13e-10!86;UBERON:0002780!2.09e-10!39;UBERON:0001890!2.09e-10!39;UBERON:0006240!2.09e-10!39;UBERON:0000153!3.10e-10!94;UBERON:0002021!1.33e-08!10;UBERON:0000411!1.33e-08!10;UBERON:0001950!1.33e-08!10;UBERON:0000956!6.99e-08!21;UBERON:0001869!6.99e-08!21;UBERON:0000203!6.99e-08!21;UBERON:0002619!2.00e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-23,54;UBERON:0000955,8.60e-22,47;UBERON:0006238,8.60e-22,47;UBERON:0001017,1.58e-20,73;UBERON:0001016,7.04e-20,75;UBERON:0002616,1.08e-19,46;UBERON:0001049,2.39e-19,52;UBERON:0005068,2.39e-19,52;UBERON:0006241,2.39e-19,52;UBERON:0007135,2.39e-19,52;UBERON:0002346,4.39e-15,64;UBERON:0003075,4.39e-15,64;UBERON:0007284,4.39e-15,64;UBERON:0004121,7.11e-15,95;UBERON:0000924,7.11e-15,95;UBERON:0006601,7.11e-15,95;UBERON:0010371,8.39e-13,73;UBERON:0003080,1.05e-12,40;UBERON:0004684,6.31e-12,3;UBERON:0002275,6.31e-12,3;UBERON:0002780,6.75e-11,39;UBERON:0001890,6.75e-11,39;UBERON:0006240,6.75e-11,39;UBERON:0003528,1.69e-10,29;UBERON:0002791,1.69e-10,29;UBERON:0001893,1.69e-10,29;UBERON:0004733,1.79e-10,6;UBERON:0004732,1.79e-10,6;UBERON:0002028,1.79e-10,6;UBERON:0007277,1.79e-10,6;UBERON:0003056,6.27e-10,49;UBERON:0010314,1.90e-09,92;UBERON:0002950,4.14e-09,4;UBERON:0001891,4.14e-09,4;UBERON:0009616,4.14e-09,4;UBERON:0010286,4.14e-09,4;UBERON:0002020,1.03e-08,34;UBERON:0001896,2.30e-08,2;UBERON:0002298,2.30e-08,2;UBERON:0005290,2.30e-08,2;UBERON:0010096,2.30e-08,2;UBERON:0002021,2.52e-08,10;UBERON:0000411,2.52e-08,10;UBERON:0001950,2.52e-08,10;UBERON:0003076,9.81e-08,12;UBERON:0003057,9.81e-08,12;UBERON:0000956,3.21e-07,21;UBERON:0001869,3.21e-07,21;UBERON:0000203,3.21e-07,21;UBERON:0000025,5.85e-07,114;UBERON:0007023,7.07e-07,51 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.287536413054709,0,2.20231761998777,2.29837208553338,1.84327839907492,0.395658863190582,0.274462930807229,0.52091337055676,0.837548997004143,2.25105044012672,1.68078072554491,0.883885756421003,0,0.931997229126503,0,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0,1.8125651855302,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.433798070759735,0,0.161766849947409,0,0.484875253135222,0,3.51336956413857,3.35114730901528,0,0,0,0,3.89455662452539,2.28750301409313,0,2.08589184230732,1.02286182932132,2.28566849015516,1.1356888414743,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.512454881139399,0.374806898238915,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.411618449517138,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0,0.780534591431195,0.472905432318573,0,0,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0,2.0871576698413,1.87538698547525,0,0,0,0,0.430846795465598,0,0.891194696329576,0.283076530788832,0,0.292255857911312,0,1.92792789853084,0,0,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,1.8542530201051,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0.584384510907845,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.03111909406213,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,0.51776031175182,0.103787347584177,0,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.128050304809739,0.459483751644906,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0.701794825336225,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Kcna2 | |||
}} |
Revision as of 01:10, 14 September 2013
Short description: | p3@Kcna2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcna2_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -285bp_to_ENSMUST00000038695, NM_008417, uc008qws.1_5end |
EntrezGene: | Kcna2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.31e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.