FFCP PHASE1:Mm9::chr3:58381651..58381661,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=616|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:58381651..58381661,-|id=chr3:58381651..58381661,-|ontology_enrichment_celltype=CL:0002563!2.37e-14!9;CL:0002251!2.37e-14!9;CL:0000239!6.22e-12!6;CL:0000677!6.22e-12!6;CL:0000212!6.22e-12!6;CL:0000584!6.22e-12!6;CL:0000066!2.78e-11!25;CL:0000075!3.61e-10!7;CL:0000223!8.58e-10!20;CL:0002076!3.51e-08!15;CL:0000063!4.36e-08!66|ontology_enrichment_celltype_v019_2=CL:0000239,2.44e-19,6;CL:0000677,2.44e-19,6;CL:0000584,2.44e-19,6;CL:0000075,1.08e-16,7;CL:0000213,1.55e-13,1;CL:0002078,1.55e-13,1;CL:0000115,1.55e-13,1;CL:0002262,1.55e-13,1;CL:1000398,1.55e-13,1;CL:0002563,3.72e-13,9;CL:0002251,3.72e-13,9;CL:0000223,2.09e-10,20;CL:0000066,2.05e-08,25;CL:0002076,3.61e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!2.37e-14!9;UBERON:0004808!2.37e-14!9;UBERON:0001277!2.37e-14!9;UBERON:0000485!1.51e-11!11;UBERON:0001242!1.32e-09!13;UBERON:0000060!1.32e-09!13;UBERON:0001262!1.32e-09!13;UBERON:0004786!1.32e-09!13;UBERON:0000344!3.51e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.55e-13,1;UBERON:0001281,1.55e-13,1;UBERON:0000353,1.55e-13,1;UBERON:0003497,1.55e-13,1;UBERON:0003909,1.55e-13,1;UBERON:0003928,1.55e-13,1;UBERON:0003835,1.55e-13,1;UBERON:0003513,1.55e-13,1;UBERON:0001280,1.55e-13,1;UBERON:0004647,1.55e-13,1;UBERON:0002294,1.55e-13,1;UBERON:0001173,1.55e-13,1;UBERON:0004912,1.55e-13,1;UBERON:0005171,1.55e-13,1;UBERON:0003350,3.72e-13,9;UBERON:0004808,3.72e-13,9;UBERON:0001277,3.72e-13,9;UBERON:0000485,6.77e-11,11;UBERON:0001242,2.52e-09,13;UBERON:0001262,2.52e-09,13;UBERON:0004786,2.52e-09,13;UBERON:0000344,3.61e-08,15|phase1_expression=0,1.04692622291808,0.454999239389536,3.93203474698879,7.01254021924886,0.503637815735669,0,0,0,0.234064526321993,0,0,0,0,0,0.404950534779652,0,0,0,0,1.7008658030214,0,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.44932244350839,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.01908701894705,0,0,0,0,0,0,0,0,0.241584120826006,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:58381651..58381661,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=616 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:58381651..58381661,- | |||
|id=chr3:58381651..58381661,- | |||
|ontology_enrichment_celltype=CL:0002563!2.37e-14!9;CL:0002251!2.37e-14!9;CL:0000239!6.22e-12!6;CL:0000677!6.22e-12!6;CL:0000212!6.22e-12!6;CL:0000584!6.22e-12!6;CL:0000066!2.78e-11!25;CL:0000075!3.61e-10!7;CL:0000223!8.58e-10!20;CL:0002076!3.51e-08!15;CL:0000063!4.36e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.44e-19,6;CL:0000677,2.44e-19,6;CL:0000584,2.44e-19,6;CL:0000075,1.08e-16,7;CL:0000213,1.55e-13,1;CL:0002078,1.55e-13,1;CL:0000115,1.55e-13,1;CL:0002262,1.55e-13,1;CL:1000398,1.55e-13,1;CL:0002563,3.72e-13,9;CL:0002251,3.72e-13,9;CL:0000223,2.09e-10,20;CL:0000066,2.05e-08,25;CL:0002076,3.61e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.37e-14!9;UBERON:0004808!2.37e-14!9;UBERON:0001277!2.37e-14!9;UBERON:0000485!1.51e-11!11;UBERON:0001242!1.32e-09!13;UBERON:0000060!1.32e-09!13;UBERON:0001262!1.32e-09!13;UBERON:0004786!1.32e-09!13;UBERON:0000344!3.51e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.55e-13,1;UBERON:0001281,1.55e-13,1;UBERON:0000353,1.55e-13,1;UBERON:0003497,1.55e-13,1;UBERON:0003909,1.55e-13,1;UBERON:0003928,1.55e-13,1;UBERON:0003835,1.55e-13,1;UBERON:0003513,1.55e-13,1;UBERON:0001280,1.55e-13,1;UBERON:0004647,1.55e-13,1;UBERON:0002294,1.55e-13,1;UBERON:0001173,1.55e-13,1;UBERON:0004912,1.55e-13,1;UBERON:0005171,1.55e-13,1;UBERON:0003350,3.72e-13,9;UBERON:0004808,3.72e-13,9;UBERON:0001277,3.72e-13,9;UBERON:0000485,6.77e-11,11;UBERON:0001242,2.52e-09,13;UBERON:0001262,2.52e-09,13;UBERON:0004786,2.52e-09,13;UBERON:0000344,3.61e-08,15 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,3.93203474698879,7.01254021924886,0.503637815735669,0,0,0,0.234064526321993,0,0,0,0,0,0.404950534779652,0,0,0,0,1.7008658030214,0,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.44932244350839,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.01908701894705,0,0,0,0,0,0,0,0,0.241584120826006,4.89651010638371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:58381651..58381661,- | |||
}} |
Revision as of 02:21, 14 September 2013
Short description: | p@chr3:58381651..58381661, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:58381651..58381661, - |
Coexpression cluster: | MCL_coexpression_mm9:616 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.44e-19 | 6 |
gut absorptive cell | 2.44e-19 | 6 |
enterocyte | 2.44e-19 | 6 |
columnar/cuboidal epithelial cell | 1.08e-16 | 7 |
lining cell | 1.55e-13 | 1 |
meso-epithelial cell | 1.55e-13 | 1 |
endothelial cell | 1.55e-13 | 1 |
endothelial cell of sinusoid | 1.55e-13 | 1 |
endothelial cell of hepatic sinusoid | 1.55e-13 | 1 |
intestinal epithelial cell | 3.72e-13 | 9 |
epithelial cell of alimentary canal | 3.72e-13 | 9 |
endodermal cell | 2.09e-10 | 20 |
epithelial cell | 2.05e-08 | 25 |
endo-epithelial cell | 3.61e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.55e-13 | 1 |
hepatic sinusoid | 1.55e-13 | 1 |
parenchyma | 1.55e-13 | 1 |
abdomen blood vessel | 1.55e-13 | 1 |
sinusoid | 1.55e-13 | 1 |
digestive system duct | 1.55e-13 | 1 |
abdominal segment blood vessel | 1.55e-13 | 1 |
trunk blood vessel | 1.55e-13 | 1 |
liver parenchyma | 1.55e-13 | 1 |
liver lobule | 1.55e-13 | 1 |
biliary system | 1.55e-13 | 1 |
biliary tree | 1.55e-13 | 1 |
biliary bud | 1.55e-13 | 1 |
hepatic duct | 1.55e-13 | 1 |
epithelium of mucosa | 3.72e-13 | 9 |
gastrointestinal system epithelium | 3.72e-13 | 9 |
intestinal epithelium | 3.72e-13 | 9 |
simple columnar epithelium | 6.77e-11 | 11 |
intestinal mucosa | 2.52e-09 | 13 |
wall of intestine | 2.52e-09 | 13 |
gastrointestinal system mucosa | 2.52e-09 | 13 |
mucosa | 3.61e-08 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.