FFCP PHASE1:Hg19::chr8:90556171..90556173,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4086|description=CAGE_peak_at_chr8:90556171..90556173,+|id=chr8:90556171..90556173,+|ontology_enrichment_celltype=CL:0000359!1.62e-41!32;CL:0000192!1.12e-30!42;CL:0000514!1.12e-30!42;CL:0000187!5.69e-23!54;CL:0000680!1.49e-21!57;CL:0000056!1.49e-21!57;CL:0000355!1.49e-21!57;CL:0000183!1.09e-20!59;CL:0002594!1.23e-20!4;CL:0000393!2.81e-20!60;CL:0000211!2.81e-20!60;CL:0002595!2.04e-16!5;CL:0000055!7.81e-15!180;CL:1000306!1.89e-11!4;CL:0002547!1.89e-11!4;CL:0002596!3.01e-11!2;CL:0002593!4.06e-11!2;CL:0002589!4.96e-11!2;CL:0000222!1.03e-10!119;CL:0000220!2.11e-08!246;CL:0002321!2.75e-08!248;CL:0002539!3.17e-08!10;CL:0002166!1.99e-07!3|ontology_enrichment_celltype_v019=CL:0000359;4.40e-48;32!CL:0002594;9.93e-41;4!CL:0000192;3.59e-30;43!CL:0000187;9.10e-18;55!CL:0002539;9.04e-17;10!CL:0000393;3.27e-16;61!CL:0000211;3.27e-16;61!CL:0002595;1.13e-15;5!CL:0002596;1.57e-10;2!CL:0002593;1.72e-10;2!CL:0002589;2.99e-10;2|ontology_enrichment_celltype_v019_2=CL:0000359,2.36e-55,32;CL:0000192,4.16e-41,43;CL:0000514,4.16e-41,43;CL:0002594,1.31e-40,4;CL:0000187,4.73e-32,55;CL:0000680,2.27e-30,58;CL:0000056,2.27e-30,58;CL:0000355,2.27e-30,58;CL:0000393,7.43e-29,61;CL:0000211,7.43e-29,61;CL:0002539,8.57e-17,10;CL:0002595,1.13e-15,5;CL:0000222,2.83e-14,121;CL:0002596,1.57e-10,2;CL:0002593,1.72e-10,2;CL:0002589,2.72e-10,2|ontology_enrichment_development_v019=CL:0000514;3.59e-30;43!CL:0000355;6.35e-19;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001637!6.56e-43!42;UBERON:0003509!6.56e-43!42;UBERON:0004572!6.56e-43!42;UBERON:0004573!5.89e-35!33;UBERON:0004571!5.89e-35!33;UBERON:0001981!1.30e-28!60;UBERON:0007500!1.30e-28!60;UBERON:0004537!1.30e-28!60;UBERON:0006965!1.30e-28!60;UBERON:0000055!2.89e-24!69;UBERON:0004872!3.07e-21!84;UBERON:0001310!1.23e-20!4;UBERON:0002049!1.34e-20!79;UBERON:0007798!1.34e-20!79;UBERON:0001134!7.02e-20!61;UBERON:0002036!7.02e-20!61;UBERON:0003082!7.02e-20!61;UBERON:0002385!4.01e-19!63;UBERON:0001015!4.01e-19!63;UBERON:0000383!4.01e-19!63;UBERON:0000914!2.45e-17!83;UBERON:0002329!2.45e-17!83;UBERON:0003077!2.45e-17!83;UBERON:0003059!2.45e-17!83;UBERON:0007282!2.45e-17!83;UBERON:0009618!2.45e-17!83;UBERON:0007285!2.45e-17!83;UBERON:0003914!6.80e-17!118;UBERON:0004290!8.12e-17!70;UBERON:0003834!2.04e-16!5;UBERON:0001533!2.04e-16!5;UBERON:0004535!4.59e-15!110;UBERON:0001009!1.55e-14!113;UBERON:0000486!8.75e-14!82;UBERON:0005256!1.11e-11!143;UBERON:0000415!1.89e-11!4;UBERON:0007240!1.89e-11!4;UBERON:0005742!1.89e-11!4;UBERON:0005734!1.89e-11!4;UBERON:0004664!1.89e-11!4;UBERON:0004663!1.89e-11!4;UBERON:0005396!3.01e-11!2;UBERON:0002456!4.06e-11!2;UBERON:0001529!4.96e-11!2;UBERON:0007204!4.96e-11!2;UBERON:0000947!1.25e-10!21;UBERON:0010191!1.25e-10!21;UBERON:0003513!2.72e-10!8;UBERON:0002100!1.48e-08!216;UBERON:0004237!3.17e-08!10;UBERON:0004695!3.17e-08!10;UBERON:0002111!3.17e-08!10;UBERON:0004178!3.17e-08!10;UBERON:0000025!3.51e-08!194;UBERON:0003104!4.29e-08!238;UBERON:0009142!4.29e-08!238;UBERON:0004111!6.98e-08!241;UBERON:0003081!1.22e-07!216;UBERON:0000490!1.28e-07!138;UBERON:0000475!2.04e-07!365;UBERON:0002204!2.88e-07!167|ontology_enrichment_uberon_v019=UBERON:0001310;9.93e-41;4!UBERON:0001637;1.08e-30;42!UBERON:0003509;1.08e-30;42!UBERON:0004572;1.08e-30;42!UBERON:0004573;1.27e-27;33!UBERON:0004571;1.27e-27;33!UBERON:0007500;7.65e-22;56!UBERON:0001981;7.65e-22;56!UBERON:0004537;7.65e-22;56!UBERON:0010260;1.49e-18;9!UBERON:0004237;9.04e-17;10!UBERON:0004695;9.04e-17;10!UBERON:0002111;9.04e-17;10!UBERON:0004178;9.04e-17;10!UBERON:0000055;2.36e-16;65!UBERON:0003834;1.13e-15;5!UBERON:0001533;1.13e-15;5!UBERON:0000947;4.76e-14;21!UBERON:0010191;4.76e-14;21!UBERON:0002049;6.39e-14;75!UBERON:0007798;6.39e-14;75!UBERON:0000025;7.65e-12;93!UBERON:0003513;1.77e-11;7!UBERON:0001135;2.10e-11;15!UBERON:0003914;3.40e-11;74!UBERON:0005396;1.57e-10;2!UBERON:0002456;1.72e-10;2!UBERON:0001529;2.99e-10;2!UBERON:0007204;2.99e-10;2!UBERON:0004535;1.34e-07;109|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.22e-51,42;UBERON:0003509,5.22e-51,42;UBERON:0004572,5.22e-51,42;UBERON:0001310,1.31e-40,4;UBERON:0007500,3.35e-36,59;UBERON:0001981,3.35e-36,59;UBERON:0004537,3.35e-36,59;UBERON:0006965,3.35e-36,59;UBERON:0004573,1.57e-34,33;UBERON:0004571,1.57e-34,33;UBERON:0000055,2.37e-31,68;UBERON:0001134,2.21e-28,62;UBERON:0002036,2.21e-28,62;UBERON:0003082,2.21e-28,62;UBERON:0002385,1.76e-27,64;UBERON:0001015,1.76e-27,64;UBERON:0000383,1.76e-27,64;UBERON:0002049,2.85e-27,78;UBERON:0007798,2.85e-27,78;UBERON:0004872,1.34e-25,83;UBERON:0002329,1.00e-24,71;UBERON:0003059,1.00e-24,71;UBERON:0007282,1.00e-24,71;UBERON:0004290,1.00e-24,71;UBERON:0009618,1.00e-24,71;UBERON:0003077,2.25e-24,72;UBERON:0007285,2.25e-24,72;UBERON:0007524,4.92e-24,73;UBERON:0007503,1.84e-22,78;UBERON:0000486,4.46e-21,83;UBERON:0004535,2.30e-19,109;UBERON:0001009,7.88e-19,112;UBERON:0010260,1.68e-18,9;UBERON:0003914,5.33e-18,117;UBERON:0004237,8.57e-17,10;UBERON:0004695,8.57e-17,10;UBERON:0002111,8.57e-17,10;UBERON:0004178,8.57e-17,10;UBERON:0003834,1.13e-15,5;UBERON:0001533,1.13e-15,5;UBERON:0005256,3.75e-14,122;UBERON:0000947,4.61e-14,21;UBERON:0010191,4.61e-14,21;UBERON:0000490,1.50e-11,148;UBERON:0003513,1.77e-11,7;UBERON:0001135,2.03e-11,15;UBERON:0000025,1.20e-10,192;UBERON:0003104,1.25e-10,160;UBERON:0009142,1.25e-10,160;UBERON:0005396,1.57e-10,2;UBERON:0002456,1.72e-10,2;UBERON:0001529,2.72e-10,2;UBERON:0007204,2.72e-10,2;UBERON:0002204,4.32e-10,167;UBERON:0003081,4.95e-10,203;UBERON:0002100,2.12e-08,199;UBERON:0004111,2.27e-08,240|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,2.38336525463794,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3940745403212,0.308033580176089,2.12922412126809,1.73986598415015,0.55597265731176,1.5743737541619,0,0,0,0,0,5.09125196681499,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.487426979262569,3.16950440270266,0,0,0,13.7841335886531,0,0.438450885253763,0,0,1.01455188481352,2.478587984798,0.845086807596724,0,0,1.07001315444375,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:90556171..90556173,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4086 | |||
|description=CAGE_peak_at_chr8:90556171..90556173,+ | |||
|id=chr8:90556171..90556173,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.62e-41!32;CL:0000192!1.12e-30!42;CL:0000514!1.12e-30!42;CL:0000187!5.69e-23!54;CL:0000680!1.49e-21!57;CL:0000056!1.49e-21!57;CL:0000355!1.49e-21!57;CL:0000183!1.09e-20!59;CL:0002594!1.23e-20!4;CL:0000393!2.81e-20!60;CL:0000211!2.81e-20!60;CL:0002595!2.04e-16!5;CL:0000055!7.81e-15!180;CL:1000306!1.89e-11!4;CL:0002547!1.89e-11!4;CL:0002596!3.01e-11!2;CL:0002593!4.06e-11!2;CL:0002589!4.96e-11!2;CL:0000222!1.03e-10!119;CL:0000220!2.11e-08!246;CL:0002321!2.75e-08!248;CL:0002539!3.17e-08!10;CL:0002166!1.99e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-48;32!CL:0002594;9.93e-41;4!CL:0000192;3.59e-30;43!CL:0000187;9.10e-18;55!CL:0002539;9.04e-17;10!CL:0000393;3.27e-16;61!CL:0000211;3.27e-16;61!CL:0002595;1.13e-15;5!CL:0002596;1.57e-10;2!CL:0002593;1.72e-10;2!CL:0002589;2.99e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.36e-55,32;CL:0000192,4.16e-41,43;CL:0000514,4.16e-41,43;CL:0002594,1.31e-40,4;CL:0000187,4.73e-32,55;CL:0000680,2.27e-30,58;CL:0000056,2.27e-30,58;CL:0000355,2.27e-30,58;CL:0000393,7.43e-29,61;CL:0000211,7.43e-29,61;CL:0002539,8.57e-17,10;CL:0002595,1.13e-15,5;CL:0000222,2.83e-14,121;CL:0002596,1.57e-10,2;CL:0002593,1.72e-10,2;CL:0002589,2.72e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000514;3.59e-30;43!CL:0000355;6.35e-19;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr8:90556171..90556173,+ | |||
}} |
Revision as of 06:17, 14 September 2013
Short description: | p@chr8:90556171..90556173, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:90556171..90556173, + |
Coexpression cluster: | C4086_Smooth_Mesothelial_seminal_Fibroblast_Alveolar_Melanocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.36e-55 | 32 |
smooth muscle cell | 4.16e-41 | 43 |
smooth muscle myoblast | 4.16e-41 | 43 |
smooth muscle cell of the umbilical artery | 1.31e-40 | 4 |
muscle cell | 4.73e-32 | 55 |
muscle precursor cell | 2.27e-30 | 58 |
myoblast | 2.27e-30 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-30 | 58 |
electrically responsive cell | 7.43e-29 | 61 |
electrically active cell | 7.43e-29 | 61 |
aortic smooth muscle cell | 8.57e-17 | 10 |
smooth muscle cell of the subclavian artery | 1.13e-15 | 5 |
mesodermal cell | 2.83e-14 | 121 |
smooth muscle cell of the carotid artery | 1.57e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.72e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.72e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.