FFCP PHASE1:Hg19::chr9:132501781..132501799,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=102bp_to_ENST00000435588_5end|description=CAGE_peak_3_at_ENST00000435588_5end|id=chr9:132501781..132501799,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002536;3.12e-27;2!CL:0000349;1.60e-17;19!CL:0000319;1.61e-14;1!CL:0002595;1.66e-11;5!CL:0000159;6.57e-08;2!CL:0002593;6.57e-08;2!CL:0002367;6.57e-08;2|ontology_enrichment_celltype_v019_2=CL:0002536,1.40e-27,2;CL:0000349,1.13e-17,19;CL:0000319,1.84e-14,1;CL:0002595,2.41e-11,5;CL:0000159,7.03e-08,2;CL:0002593,8.60e-08,2;CL:0002367,9.19e-08,2|ontology_enrichment_development_v019=UBERON:0005754;5.06e-15;1!UBERON:0005425;1.61e-14;1!UBERON:0007297;3.69e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;1.61e-14;1|ontology_enrichment_disease_v019_2=DOID:3030,1.84e-14,1|ontology_enrichment_uberon=UBERON:0005631!3.91e-12!14;UBERON:0000158!3.91e-12!14;UBERON:0004923!3.44e-09!57;UBERON:0000478!2.11e-07!24;UBERON:0000305!4.01e-07!7|ontology_enrichment_uberon_v019=UBERON:0005631;1.15e-21;10!UBERON:0000158;1.15e-21;10!UBERON:0006947;7.58e-19;3!UBERON:0004054;7.58e-19;3!UBERON:0000305;1.07e-17;7!UBERON:0000998;5.06e-15;1!UBERON:0006868;5.06e-15;1!UBERON:0001000;1.61e-14;1!UBERON:0000941;1.61e-14;1!UBERON:0001785;1.61e-14;1!UBERON:0002464;1.61e-14;1!UBERON:0004904;1.61e-14;1!UBERON:0001021;1.61e-14;1!UBERON:0005352;1.61e-14;1!UBERON:0005904;2.18e-14;4!UBERON:0000478;7.08e-14;24!UBERON:0003834;1.66e-11;5!UBERON:0001533;1.66e-11;5!UBERON:0003513;1.78e-08;7!UBERON:0003714;6.57e-08;2!UBERON:0005162;6.57e-08;2!UBERON:0000122;6.57e-08;2!UBERON:0005969;6.57e-08;2!UBERON:0002456;6.57e-08;2!UBERON:0003956;6.57e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.85e-24,14;UBERON:0000158,5.85e-24,14;UBERON:0006947,9.50e-19,3;UBERON:0004054,9.50e-19,3;UBERON:0000305,7.84e-18,7;UBERON:0004871,1.10e-15,8;UBERON:0000998,5.42e-15,1;UBERON:0006868,5.42e-15,1;UBERON:0000941,1.07e-14,1;UBERON:0001785,1.07e-14,1;UBERON:0002464,1.07e-14,1;UBERON:0004904,1.07e-14,1;UBERON:0001021,1.07e-14,1;UBERON:0003902,1.07e-14,1;UBERON:0005425,1.07e-14,1;UBERON:0001000,2.11e-14,1;UBERON:0005352,2.11e-14,1;UBERON:0005904,2.58e-14,4;UBERON:0000478,5.40e-14,24;UBERON:0003834,2.41e-11,5;UBERON:0001533,2.41e-11,5;UBERON:0003124,1.09e-08,7;UBERON:0003513,2.32e-08,7;UBERON:0003714,5.37e-08,2;UBERON:0005162,5.37e-08,2;UBERON:0000122,5.37e-08,2;UBERON:0002456,8.60e-08,2;UBERON:0005969,9.19e-08,2;UBERON:0003956,9.19e-08,2;UBERON:0004923,5.16e-07,66|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0,1.31064823278103,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.973269740605272,0,0,0.263504357079378,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0.220587945464788,0,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0.904318131178758,0,2.49932477955143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.5119514666484,1.24053903909388,0,0,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0,0.519254429183621,0,0,0,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.096670718292122,0.616194468458578,0.307007349452259,0,0.214840489736547,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0.974853958525138,1.05650146756755,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.296964680832639,2.15012491469462,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.359030577639089,0.325942115766024,0.638002319463839,0,4.264278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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=102bp_to_ENST00000435588_5end | |||
|description=CAGE_peak_3_at_ENST00000435588_5end | |||
|id=chr9:132501781..132501799,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002536;3.12e-27;2!CL:0000349;1.60e-17;19!CL:0000319;1.61e-14;1!CL:0002595;1.66e-11;5!CL:0000159;6.57e-08;2!CL:0002593;6.57e-08;2!CL:0002367;6.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,1.40e-27,2;CL:0000349,1.13e-17,19;CL:0000319,1.84e-14,1;CL:0002595,2.41e-11,5;CL:0000159,7.03e-08,2;CL:0002593,8.60e-08,2;CL:0002367,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.06e-15;1!UBERON:0005425;1.61e-14;1!UBERON:0007297;3.69e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.61e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.84e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.91e-12!14;UBERON:0000158!3.91e-12!14;UBERON:0004923!3.44e-09!57;UBERON:0000478!2.11e-07!24;UBERON:0000305!4.01e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.15e-21;10!UBERON:0000158;1.15e-21;10!UBERON:0006947;7.58e-19;3!UBERON:0004054;7.58e-19;3!UBERON:0000305;1.07e-17;7!UBERON:0000998;5.06e-15;1!UBERON:0006868;5.06e-15;1!UBERON:0001000;1.61e-14;1!UBERON:0000941;1.61e-14;1!UBERON:0001785;1.61e-14;1!UBERON:0002464;1.61e-14;1!UBERON:0004904;1.61e-14;1!UBERON:0001021;1.61e-14;1!UBERON:0005352;1.61e-14;1!UBERON:0005904;2.18e-14;4!UBERON:0000478;7.08e-14;24!UBERON:0003834;1.66e-11;5!UBERON:0001533;1.66e-11;5!UBERON:0003513;1.78e-08;7!UBERON:0003714;6.57e-08;2!UBERON:0005162;6.57e-08;2!UBERON:0000122;6.57e-08;2!UBERON:0005969;6.57e-08;2!UBERON:0002456;6.57e-08;2!UBERON:0003956;6.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.85e-24,14;UBERON:0000158,5.85e-24,14;UBERON:0006947,9.50e-19,3;UBERON:0004054,9.50e-19,3;UBERON:0000305,7.84e-18,7;UBERON:0004871,1.10e-15,8;UBERON:0000998,5.42e-15,1;UBERON:0006868,5.42e-15,1;UBERON:0000941,1.07e-14,1;UBERON:0001785,1.07e-14,1;UBERON:0002464,1.07e-14,1;UBERON:0004904,1.07e-14,1;UBERON:0001021,1.07e-14,1;UBERON:0003902,1.07e-14,1;UBERON:0005425,1.07e-14,1;UBERON:0001000,2.11e-14,1;UBERON:0005352,2.11e-14,1;UBERON:0005904,2.58e-14,4;UBERON:0000478,5.40e-14,24;UBERON:0003834,2.41e-11,5;UBERON:0001533,2.41e-11,5;UBERON:0003124,1.09e-08,7;UBERON:0003513,2.32e-08,7;UBERON:0003714,5.37e-08,2;UBERON:0005162,5.37e-08,2;UBERON:0000122,5.37e-08,2;UBERON:0002456,8.60e-08,2;UBERON:0005969,9.19e-08,2;UBERON:0003956,9.19e-08,2;UBERON:0004923,5.16e-07,66 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0,1.31064823278103,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.973269740605272,0,0,0.263504357079378,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.206651562351531,0,0.494533858557114,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0.220587945464788,0,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0.904318131178758,0,2.49932477955143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.5119514666484,1.24053903909388,0,0,0.128139149255701,0,0.482561763430822,0,0,0.177561725313127,0,0.519254429183621,0,0,0,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.096670718292122,0.616194468458578,0.307007349452259,0,0.214840489736547,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0.974853958525138,1.05650146756755,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.987884678879706,0,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.296964680832639,2.15012491469462,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.359030577639089,0.325942115766024,0.638002319463839,0,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0.584714536689484,0.328461828212837,0,0,0.225980740780532,0,0.19871461170299,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0.889811221596536,0,0,0.15543720058278,0.147855149989634,0,1.34940933649081,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.236664001461131,0.170426809518315,4.23387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684466602170562,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000435588 | |||
}} |
Revision as of 07:47, 14 September 2013
Short description: | p3@ENST00000435588 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000435588_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000435588_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.40e-27 | 2 |
extraembryonic cell | 1.13e-17 | 19 |
mucus secreting cell | 1.84e-14 | 1 |
smooth muscle cell of the subclavian artery | 2.41e-11 | 5 |
seromucus secreting cell | 7.03e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 8.60e-08 | 2 |
trabecular meshwork cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.85e-24 | 14 |
membranous layer | 5.85e-24 | 14 |
male genital duct | 9.50e-19 | 3 |
internal male genitalia | 9.50e-19 | 3 |
amnion | 7.84e-18 | 7 |
somatic layer of lateral plate mesoderm | 1.10e-15 | 8 |
seminal vesicle | 5.42e-15 | 1 |
seminal fluid secreting gland | 5.42e-15 | 1 |
cranial nerve II | 1.07e-14 | 1 |
cranial nerve | 1.07e-14 | 1 |
nerve trunk | 1.07e-14 | 1 |
nerve connecting eye with brain | 1.07e-14 | 1 |
nerve | 1.07e-14 | 1 |
retinal neural layer | 1.07e-14 | 1 |
presumptive neural retina | 1.07e-14 | 1 |
vas deferens | 2.11e-14 | 1 |
spermatic cord | 2.11e-14 | 1 |
duct of male reproductive system | 2.58e-14 | 4 |
extraembryonic structure | 5.40e-14 | 24 |
thoracic segment blood vessel | 2.41e-11 | 5 |
subclavian artery | 2.41e-11 | 5 |
chorion | 1.09e-08 | 7 |
trunk blood vessel | 2.32e-08 | 7 |
neural tissue | 5.37e-08 | 2 |
multi cell component structure | 5.37e-08 | 2 |
neuron projection bundle | 5.37e-08 | 2 |
internal thoracic artery | 8.60e-08 | 2 |
reticulum trabeculare | 9.19e-08 | 2 |
aqueous drainage system | 9.19e-08 | 2 |
organ component layer | 5.16e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.84e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.