FFCP PHASE1:Mm9::chr6:86799437..86799448,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269774|HGNC=|MCL_coexpression_id=1|UniProt=Q3UHJ0|association_with_transcript=-62bp_to_ENSMUST00000089519,NM_001040106,NM_177762,uc009csr.1,uc009css.1,uc009cst.1_5end|description=CAGE_peak_4_at_Aak1_5end|id=chr6:86799437..86799448,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,9.12e-11,23;CL:0000337,9.12e-11,23;CL:0002610,4.26e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.79e-16!52;UBERON:0005068!1.79e-16!52;UBERON:0006241!1.79e-16!52;UBERON:0007135!1.79e-16!52;UBERON:0000955!6.03e-16!50;UBERON:0006238!6.03e-16!50;UBERON:0002616!2.47e-15!49;UBERON:0002346!1.30e-13!71;UBERON:0003075!1.30e-13!71;UBERON:0007284!1.30e-13!71;UBERON:0000033!2.69e-13!63;UBERON:0001017!1.18e-12!73;UBERON:0005743!1.18e-12!73;UBERON:0000073!6.36e-12!75;UBERON:0001016!6.36e-12!75;UBERON:0003056!1.32e-11!49;UBERON:0003080!1.55e-11!40;UBERON:0002020!3.01e-11!34;UBERON:0002780!5.14e-11!39;UBERON:0001890!5.14e-11!39;UBERON:0006240!5.14e-11!39;UBERON:0004121!1.41e-09!102;UBERON:0000924!1.41e-09!102;UBERON:0006601!1.41e-09!102;UBERON:0000153!2.37e-09!94;UBERON:0002791!6.68e-09!29;UBERON:0003528!6.68e-09!29;UBERON:0001893!6.68e-09!29;UBERON:0007811!3.06e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.05e-31,54;UBERON:0001049,1.44e-27,52;UBERON:0005068,1.44e-27,52;UBERON:0006241,1.44e-27,52;UBERON:0007135,1.44e-27,52;UBERON:0001017,1.65e-25,73;UBERON:0001016,1.43e-24,75;UBERON:0000955,4.35e-23,47;UBERON:0006238,4.35e-23,47;UBERON:0002346,1.69e-22,64;UBERON:0003075,1.69e-22,64;UBERON:0007284,1.69e-22,64;UBERON:0002616,1.06e-21,46;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0010371,1.19e-18,73;UBERON:0002020,6.63e-18,34;UBERON:0003080,4.66e-16,40;UBERON:0002780,6.63e-15,39;UBERON:0001890,6.63e-15,39;UBERON:0006240,6.63e-15,39;UBERON:0010314,4.99e-14,92;UBERON:0003528,9.59e-14,29;UBERON:0002791,9.59e-14,29;UBERON:0001893,9.59e-14,29;UBERON:0003056,1.81e-13,49;UBERON:0003076,3.74e-13,12;UBERON:0003057,3.74e-13,12;UBERON:0002420,4.94e-10,8;UBERON:0007245,4.94e-10,8;UBERON:0010009,4.94e-10,8;UBERON:0010011,4.94e-10,8;UBERON:0000454,4.94e-10,8;UBERON:0000025,8.24e-09,114;UBERON:0004111,2.26e-08,122;UBERON:0002021,6.46e-08,10;UBERON:0000411,6.46e-08,10;UBERON:0001950,6.46e-08,10;UBERON:0002950,1.09e-07,4;UBERON:0001891,1.09e-07,4;UBERON:0009616,1.09e-07,4;UBERON:0010286,1.09e-07,4;UBERON:0004733,1.88e-07,6;UBERON:0004732,1.88e-07,6;UBERON:0002028,1.88e-07,6;UBERON:0007277,1.88e-07,6;UBERON:0002240,3.24e-07,6;UBERON:0005174,3.24e-07,6;UBERON:0001137,3.24e-07,6;UBERON:0004684,4.26e-07,3;UBERON:0002275,4.26e-07,3;UBERON:0002619,6.48e-07,17|phase1_expression=0,2.09385244583617,0.454999239389536,1.51232105653415,1.00179145989269,1.00727563147134,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0.404950534779652,0,0.473193248037357,0.548457734422955,0.42438965179803,0.935476191661768,0,0,0.47997726838022,0.45881856213434,1.72269589234506,0,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0.377690453926732,0.202753862439029,0.183546752161682,0,1.09012578190223,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,0,0.336093799142464,1.02903774414379,0,0.515672092277442,0.809265843438391,0,0,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.420649922702764,0.856952953211411,1.10434270475807,0.489963196859816,1.62937300731002,0,2.20231761998777,3.06449611404451,4.30098293117482,1.31886287730194,1.73826522844578,0.52091337055676,1.3959149950069,1.68828783009504,3.66715794664344,2.06240009831567,1.70846016958924,1.3047961207771,0.227178579999552,0.151143120213571,0,0.860423876981386,0,0.539703191637817,0,0,0.280888840263504,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0.517875767294343,0.29688427812965,0.346970653532272,0.608930956624282,0,0.150722640552623,0.470354828542819,0.251333182659351,0.494389935468748,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,0,2.63502717310392,1.04723353406728,0.255457055208591,0.239630249011841,0,0,1.64769703345305,1.83000241127451,1.00523481690292,1.91206752211504,2.55715457330331,3.32460871295296,1.46017136760982,0.712875546952214,0.248813941220186,0.252722758433675,0.841767423545896,0.390361328888111,0.919608417733892,0.180062129805349,0.30140963567143,0.748401490664606,0.2562274405697,0.468508622798644,1.81092359517311,0.431135985865684,0.945530400839096,0.879755620819744,0.876782929710299,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0,0.710234206755631,0.196764231747404,0,0.232533944750408,0.268273401399619,0.583826711835847,0.822799249567402,0.32833492815819,0.48641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| ||
|EntrezGene=269774 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q3UHJ0 | |||
|association_with_transcript=-62bp_to_ENSMUST00000089519,NM_001040106,NM_177762,uc009csr.1,uc009css.1,uc009cst.1_5end | |||
|description=CAGE_peak_4_at_Aak1_5end | |||
|id=chr6:86799437..86799448,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.12e-11,23;CL:0000337,9.12e-11,23;CL:0002610,4.26e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.79e-16!52;UBERON:0005068!1.79e-16!52;UBERON:0006241!1.79e-16!52;UBERON:0007135!1.79e-16!52;UBERON:0000955!6.03e-16!50;UBERON:0006238!6.03e-16!50;UBERON:0002616!2.47e-15!49;UBERON:0002346!1.30e-13!71;UBERON:0003075!1.30e-13!71;UBERON:0007284!1.30e-13!71;UBERON:0000033!2.69e-13!63;UBERON:0001017!1.18e-12!73;UBERON:0005743!1.18e-12!73;UBERON:0000073!6.36e-12!75;UBERON:0001016!6.36e-12!75;UBERON:0003056!1.32e-11!49;UBERON:0003080!1.55e-11!40;UBERON:0002020!3.01e-11!34;UBERON:0002780!5.14e-11!39;UBERON:0001890!5.14e-11!39;UBERON:0006240!5.14e-11!39;UBERON:0004121!1.41e-09!102;UBERON:0000924!1.41e-09!102;UBERON:0006601!1.41e-09!102;UBERON:0000153!2.37e-09!94;UBERON:0002791!6.68e-09!29;UBERON:0003528!6.68e-09!29;UBERON:0001893!6.68e-09!29;UBERON:0007811!3.06e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.05e-31,54;UBERON:0001049,1.44e-27,52;UBERON:0005068,1.44e-27,52;UBERON:0006241,1.44e-27,52;UBERON:0007135,1.44e-27,52;UBERON:0001017,1.65e-25,73;UBERON:0001016,1.43e-24,75;UBERON:0000955,4.35e-23,47;UBERON:0006238,4.35e-23,47;UBERON:0002346,1.69e-22,64;UBERON:0003075,1.69e-22,64;UBERON:0007284,1.69e-22,64;UBERON:0002616,1.06e-21,46;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0010371,1.19e-18,73;UBERON:0002020,6.63e-18,34;UBERON:0003080,4.66e-16,40;UBERON:0002780,6.63e-15,39;UBERON:0001890,6.63e-15,39;UBERON:0006240,6.63e-15,39;UBERON:0010314,4.99e-14,92;UBERON:0003528,9.59e-14,29;UBERON:0002791,9.59e-14,29;UBERON:0001893,9.59e-14,29;UBERON:0003056,1.81e-13,49;UBERON:0003076,3.74e-13,12;UBERON:0003057,3.74e-13,12;UBERON:0002420,4.94e-10,8;UBERON:0007245,4.94e-10,8;UBERON:0010009,4.94e-10,8;UBERON:0010011,4.94e-10,8;UBERON:0000454,4.94e-10,8;UBERON:0000025,8.24e-09,114;UBERON:0004111,2.26e-08,122;UBERON:0002021,6.46e-08,10;UBERON:0000411,6.46e-08,10;UBERON:0001950,6.46e-08,10;UBERON:0002950,1.09e-07,4;UBERON:0001891,1.09e-07,4;UBERON:0009616,1.09e-07,4;UBERON:0010286,1.09e-07,4;UBERON:0004733,1.88e-07,6;UBERON:0004732,1.88e-07,6;UBERON:0002028,1.88e-07,6;UBERON:0007277,1.88e-07,6;UBERON:0002240,3.24e-07,6;UBERON:0005174,3.24e-07,6;UBERON:0001137,3.24e-07,6;UBERON:0004684,4.26e-07,3;UBERON:0002275,4.26e-07,3;UBERON:0002619,6.48e-07,17 | |||
|phase1_expression=0,2.09385244583617,0.454999239389536,1.51232105653415,1.00179145989269,1.00727563147134,0.233612640595526,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0.404950534779652,0,0.473193248037357,0.548457734422955,0.42438965179803,0.935476191661768,0,0,0.47997726838022,0.45881856213434,1.72269589234506,0,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0.377690453926732,0.202753862439029,0.183546752161682,0,1.09012578190223,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,0,0.336093799142464,1.02903774414379,0,0.515672092277442,0.809265843438391,0,0,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.420649922702764,0.856952953211411,1.10434270475807,0.489963196859816,1.62937300731002,0,2.20231761998777,3.06449611404451,4.30098293117482,1.31886287730194,1.73826522844578,0.52091337055676,1.3959149950069,1.68828783009504,3.66715794664344,2.06240009831567,1.70846016958924,1.3047961207771,0.227178579999552,0.151143120213571,0,0.860423876981386,0,0.539703191637817,0,0,0.280888840263504,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0.11418387971906,0.517875767294343,0.29688427812965,0.346970653532272,0.608930956624282,0,0.150722640552623,0.470354828542819,0.251333182659351,0.494389935468748,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,0,2.63502717310392,1.04723353406728,0.255457055208591,0.239630249011841,0,0,1.64769703345305,1.83000241127451,1.00523481690292,1.91206752211504,2.55715457330331,3.32460871295296,1.46017136760982,0.712875546952214,0.248813941220186,0.252722758433675,0.841767423545896,0.390361328888111,0.919608417733892,0.180062129805349,0.30140963567143,0.748401490664606,0.2562274405697,0.468508622798644,1.81092359517311,0.431135985865684,0.945530400839096,0.879755620819744,0.876782929710299,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.414251545071004,0.469052119962192,0,0.710234206755631,0.196764231747404,0,0.232533944750408,0.268273401399619,0.583826711835847,0.822799249567402,0.32833492815819,0.486412857275134,0.730999937126662,0.658650345873152,0.268412837520744,1.68231958851302,0.205809224758569,0.660837565967596,0.264450566663544,0.213288250535234,0,0.515469845288373,0.80673409849337,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0.864552199498777,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.911765658574141,0.632365371242573,0.885660887877613,0.156998727841375,0.493588655687202,0,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.324270453550071,0,0,0,0.312037673114561,0,0.358794827043824,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0.704070744865506,0.335012514883631,0,0.585400943573396,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,2.40825884981688,1.99259867206745,0.491804836130026,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,1.92792789853084,0.851640511249612,0.35613120733451,0.977321756121456,0.824850614862677,0,0.242780636154981,0.302323556964751,0.377210159511796,0,1.22974059177571,0.775284879504663,0,0,0.632073515871632,2.10837217149998,1.03135543248187,1.02131881726136,0.720244376125241,0.388076051348264,0.428674070063185,0.886701168211368,1.42695054081656,0.658196082408484,0.304464949114599,0,0.847328283455281,0.220528398054962,0.98931751764888,0.645857706783622,0.422190474497091,0.358117032009409,0,1.1659233465194,1.8542530201051,0.341741761595705,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,0,0,0.954670618015114,0.632671987162271,0.203319467126849,0.324016022465404,0,0.436725127492355,0,0.330613822901344,0,0.259229946583586,0,2.81846469342095,0.747582730219894,0.165458490457098,0.194451188344048,0.645799117388655,0,0.352071715937262,0.13020438484395,0.734015410979976,0.483168241652012,0.288030006257865,0,0.608175645870493,0.616265742988964,0.649604114888975,0.895133478337407,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0.685861259894999,0.604957110821043,0.0974578807397524,0.288635524920988,0.584384510907845,0,0.221985953374065,0.986852422704233,0.167884616364078,0.386379188064381,0,0.36630324853453,0,1.00314420807073,1.12950368523413,0.920650473014354,0.572895513439397,1.89038500578056,1.37016503954128,0.755393897389701,2.02506750069542,2.70192721934532,1.35942722695261,1.55328093525546,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0,0.25347929989024,0,0.4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| |||
|short_description=p4@Aak1 | |||
}} | |||
Revision as of 10:51, 14 September 2013
| Short description: | p4@Aak1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Aak1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -62bp_to_ENSMUST00000089519, NM_001040106, NM_177762, uc009csr.1, uc009css.1, uc009cst.1_5end |
| EntrezGene: | Aak1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 9.12e-11 | 23 |
| neuroblast (sensu Vertebrata) | 9.12e-11 | 23 |
| raphe nuclei neuron | 4.26e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
