FFCP PHASE1:Mm9::chr7:125735998..125736019,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=-18bp_to_uc009jkd.1_5end|description=CAGE_peak_2_at_uc009jkd.1_5end|id=chr7:125735998..125736019,+|ontology_enrichment_celltype=CL:0000055!8.77e-14!50;CL:0000221!3.66e-13!44;CL:0000133!3.66e-13!44;CL:0002319!6.15e-13!43;CL:0000117!4.09e-09!23;CL:0000337!4.09e-09!23;CL:0000333!7.80e-09!10;CL:0000095!7.80e-09!10;CL:0000243!7.80e-09!10;CL:0000123!7.80e-09!10;CL:0000125!7.80e-09!10;CL:0000030!7.80e-09!10;CL:0000339!7.80e-09!10;CL:0002453!2.85e-08!8;CL:0000393!4.62e-08!39;CL:0000211!4.62e-08!39;CL:0002321!6.05e-07!70;CL:0000220!6.05e-07!70;CL:0000540!8.79e-07!33;CL:0000047!8.79e-07!33;CL:0000031!8.79e-07!33;CL:0000404!8.79e-07!33|ontology_enrichment_celltype_v019_2=CL:0002453,4.81e-14,8;CL:0002319,3.84e-12,43;CL:0000221,9.02e-12,44;CL:0000133,9.02e-12,44;CL:0000333,5.30e-11,10;CL:0000095,5.30e-11,10;CL:0000243,5.30e-11,10;CL:0000123,5.30e-11,10;CL:0000125,5.30e-11,10;CL:0000030,5.30e-11,10;CL:0000339,5.30e-11,10;CL:0000128,1.50e-09,6;CL:0000126,1.50e-09,6;CL:0000127,1.50e-09,6;CL:0000117,1.91e-08,23;CL:0000337,1.91e-08,23;CL:0002610,3.13e-08,3;CL:0002614,9.53e-08,3;CL:0002321,9.84e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.15e-26!75;UBERON:0001016!1.15e-26!75;UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0004121!2.57e-21!102;UBERON:0000924!2.57e-21!102;UBERON:0006601!2.57e-21!102;UBERON:0001049!5.20e-21!52;UBERON:0005068!5.20e-21!52;UBERON:0006241!5.20e-21!52;UBERON:0007135!5.20e-21!52;UBERON:0000955!1.42e-19!50;UBERON:0006238!1.42e-19!50;UBERON:0002616!8.61e-19!49;UBERON:0002020!6.96e-18!34;UBERON:0000033!5.36e-16!63;UBERON:0002791!6.33e-14!29;UBERON:0003528!6.33e-14!29;UBERON:0001893!6.33e-14!29;UBERON:0002346!1.80e-13!71;UBERON:0003075!1.80e-13!71;UBERON:0007284!1.80e-13!71;UBERON:0003080!7.18e-12!40;UBERON:0003076!4.01e-11!12;UBERON:0003057!4.01e-11!12;UBERON:0002780!4.19e-11!39;UBERON:0001890!4.19e-11!39;UBERON:0006240!4.19e-11!39;UBERON:0000956!5.95e-10!21;UBERON:0001869!5.95e-10!21;UBERON:0000203!5.95e-10!21;UBERON:0007811!8.95e-10!86;UBERON:0002619!2.40e-09!17;UBERON:0000153!2.42e-09!94;UBERON:0003056!1.39e-08!49;UBERON:0002021!2.54e-08!10;UBERON:0000411!2.54e-08!10;UBERON:0001950!2.54e-08!10;UBERON:0000025!2.86e-07!114;UBERON:0004111!3.63e-07!122;UBERON:0002298!6.81e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-35,73;UBERON:0001016,1.55e-34,75;UBERON:0000073,2.67e-33,54;UBERON:0001049,1.25e-29,52;UBERON:0005068,1.25e-29,52;UBERON:0006241,1.25e-29,52;UBERON:0007135,1.25e-29,52;UBERON:0004121,1.30e-25,95;UBERON:0000924,1.30e-25,95;UBERON:0006601,1.30e-25,95;UBERON:0000955,1.78e-23,47;UBERON:0006238,1.78e-23,47;UBERON:0002346,8.50e-23,64;UBERON:0003075,8.50e-23,64;UBERON:0007284,8.50e-23,64;UBERON:0002616,5.74e-22,46;UBERON:0002020,7.39e-21,34;UBERON:0010371,3.78e-19,73;UBERON:0003076,1.54e-17,12;UBERON:0003057,1.54e-17,12;UBERON:0003528,3.05e-15,29;UBERON:0002791,3.05e-15,29;UBERON:0001893,3.05e-15,29;UBERON:0003080,3.39e-15,40;UBERON:0010314,8.46e-14,92;UBERON:0002780,9.72e-14,39;UBERON:0001890,9.72e-14,39;UBERON:0006240,9.72e-14,39;UBERON:0002619,1.00e-12,17;UBERON:0000025,7.51e-12,114;UBERON:0000956,9.54e-12,21;UBERON:0001869,9.54e-12,21;UBERON:0000203,9.54e-12,21;UBERON:0003056,1.38e-11,49;UBERON:0004111,1.30e-10,122;UBERON:0002950,6.15e-10,4;UBERON:0001891,6.15e-10,4;UBERON:0009616,6.15e-10,4;UBERON:0010286,6.15e-10,4;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0002021,2.04e-09,10;UBERON:0000411,2.04e-09,10;UBERON:0001950,2.04e-09,10;UBERON:0004733,2.36e-09,6;UBERON:0004732,2.36e-09,6;UBERON:0002028,2.36e-09,6;UBERON:0007277,2.36e-09,6;UBERON:0011216,1.92e-08,194;UBERON:0004684,3.13e-08,3;UBERON:0002275,3.13e-08,3;UBERON:0002038,9.53e-08,3;UBERON:0009663,9.53e-08,3;UBERON:0009661,9.53e-08,3;UBERON:0000125,9.53e-08,3;UBERON:0002308,9.53e-08,3;UBERON:0001948,1.63e-07,5;UBERON:0002315,1.63e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,1.62203089951223,0.917733760808408,0.782391344348039,4.57852828398938,3.73466510648602,1.74986909166855,2.51975558925653,5.75010257459886,0,0,0,0.514518872071894,0,0,0.606949382578793,0,0.633831403506179,0,0.889294796111139,0,0,0,9.28760342607055,12.6792040756113,0.207379224616955,0,0.420649922702764,7.42692559449889,7.06779331045163,0.122490799214954,0,0,11.0115880999389,4.85211884723713,5.52983519722476,0.395658863190582,0.640413505216868,0,6.42120897703176,2.8138130501584,3.36156145108982,1.76777151284201,1.13897344639282,0.931997229126503,0.151452386666368,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,1.75668478206928,1.04723353406728,0,0,0,0,6.14141621559773,2.28750301409313,0.502617408451458,1.04294592115366,2.04572365864264,3.94797284663164,2.27137768294861,0,0.248813941220186,0.758168275301024,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0,0,1.68231958851302,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.827810238914197,7.70642831941401,3.7507739709505,0.327869890753351,1.26235463602186,0,0.390438744296638,0,0,0.222798674082394,0,0.809621403349789,0,0,2.24924921495265,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.361877549568935,0.238744688006273,0,0,10.9400928186201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,2.29158205375759,1.20297227640581,3.42541259885321,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.695603506861264|short_description=p2@uc009jkd.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_uc009jkd.1_5end | |||
|description=CAGE_peak_2_at_uc009jkd.1_5end | |||
|id=chr7:125735998..125736019,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.77e-14!50;CL:0000221!3.66e-13!44;CL:0000133!3.66e-13!44;CL:0002319!6.15e-13!43;CL:0000117!4.09e-09!23;CL:0000337!4.09e-09!23;CL:0000333!7.80e-09!10;CL:0000095!7.80e-09!10;CL:0000243!7.80e-09!10;CL:0000123!7.80e-09!10;CL:0000125!7.80e-09!10;CL:0000030!7.80e-09!10;CL:0000339!7.80e-09!10;CL:0002453!2.85e-08!8;CL:0000393!4.62e-08!39;CL:0000211!4.62e-08!39;CL:0002321!6.05e-07!70;CL:0000220!6.05e-07!70;CL:0000540!8.79e-07!33;CL:0000047!8.79e-07!33;CL:0000031!8.79e-07!33;CL:0000404!8.79e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.81e-14,8;CL:0002319,3.84e-12,43;CL:0000221,9.02e-12,44;CL:0000133,9.02e-12,44;CL:0000333,5.30e-11,10;CL:0000095,5.30e-11,10;CL:0000243,5.30e-11,10;CL:0000123,5.30e-11,10;CL:0000125,5.30e-11,10;CL:0000030,5.30e-11,10;CL:0000339,5.30e-11,10;CL:0000128,1.50e-09,6;CL:0000126,1.50e-09,6;CL:0000127,1.50e-09,6;CL:0000117,1.91e-08,23;CL:0000337,1.91e-08,23;CL:0002610,3.13e-08,3;CL:0002614,9.53e-08,3;CL:0002321,9.84e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.15e-26!75;UBERON:0001016!1.15e-26!75;UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0004121!2.57e-21!102;UBERON:0000924!2.57e-21!102;UBERON:0006601!2.57e-21!102;UBERON:0001049!5.20e-21!52;UBERON:0005068!5.20e-21!52;UBERON:0006241!5.20e-21!52;UBERON:0007135!5.20e-21!52;UBERON:0000955!1.42e-19!50;UBERON:0006238!1.42e-19!50;UBERON:0002616!8.61e-19!49;UBERON:0002020!6.96e-18!34;UBERON:0000033!5.36e-16!63;UBERON:0002791!6.33e-14!29;UBERON:0003528!6.33e-14!29;UBERON:0001893!6.33e-14!29;UBERON:0002346!1.80e-13!71;UBERON:0003075!1.80e-13!71;UBERON:0007284!1.80e-13!71;UBERON:0003080!7.18e-12!40;UBERON:0003076!4.01e-11!12;UBERON:0003057!4.01e-11!12;UBERON:0002780!4.19e-11!39;UBERON:0001890!4.19e-11!39;UBERON:0006240!4.19e-11!39;UBERON:0000956!5.95e-10!21;UBERON:0001869!5.95e-10!21;UBERON:0000203!5.95e-10!21;UBERON:0007811!8.95e-10!86;UBERON:0002619!2.40e-09!17;UBERON:0000153!2.42e-09!94;UBERON:0003056!1.39e-08!49;UBERON:0002021!2.54e-08!10;UBERON:0000411!2.54e-08!10;UBERON:0001950!2.54e-08!10;UBERON:0000025!2.86e-07!114;UBERON:0004111!3.63e-07!122;UBERON:0002298!6.81e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-35,73;UBERON:0001016,1.55e-34,75;UBERON:0000073,2.67e-33,54;UBERON:0001049,1.25e-29,52;UBERON:0005068,1.25e-29,52;UBERON:0006241,1.25e-29,52;UBERON:0007135,1.25e-29,52;UBERON:0004121,1.30e-25,95;UBERON:0000924,1.30e-25,95;UBERON:0006601,1.30e-25,95;UBERON:0000955,1.78e-23,47;UBERON:0006238,1.78e-23,47;UBERON:0002346,8.50e-23,64;UBERON:0003075,8.50e-23,64;UBERON:0007284,8.50e-23,64;UBERON:0002616,5.74e-22,46;UBERON:0002020,7.39e-21,34;UBERON:0010371,3.78e-19,73;UBERON:0003076,1.54e-17,12;UBERON:0003057,1.54e-17,12;UBERON:0003528,3.05e-15,29;UBERON:0002791,3.05e-15,29;UBERON:0001893,3.05e-15,29;UBERON:0003080,3.39e-15,40;UBERON:0010314,8.46e-14,92;UBERON:0002780,9.72e-14,39;UBERON:0001890,9.72e-14,39;UBERON:0006240,9.72e-14,39;UBERON:0002619,1.00e-12,17;UBERON:0000025,7.51e-12,114;UBERON:0000956,9.54e-12,21;UBERON:0001869,9.54e-12,21;UBERON:0000203,9.54e-12,21;UBERON:0003056,1.38e-11,49;UBERON:0004111,1.30e-10,122;UBERON:0002950,6.15e-10,4;UBERON:0001891,6.15e-10,4;UBERON:0009616,6.15e-10,4;UBERON:0010286,6.15e-10,4;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0002021,2.04e-09,10;UBERON:0000411,2.04e-09,10;UBERON:0001950,2.04e-09,10;UBERON:0004733,2.36e-09,6;UBERON:0004732,2.36e-09,6;UBERON:0002028,2.36e-09,6;UBERON:0007277,2.36e-09,6;UBERON:0011216,1.92e-08,194;UBERON:0004684,3.13e-08,3;UBERON:0002275,3.13e-08,3;UBERON:0002038,9.53e-08,3;UBERON:0009663,9.53e-08,3;UBERON:0009661,9.53e-08,3;UBERON:0000125,9.53e-08,3;UBERON:0002308,9.53e-08,3;UBERON:0001948,1.63e-07,5;UBERON:0002315,1.63e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,1.62203089951223,0.917733760808408,0.782391344348039,4.57852828398938,3.73466510648602,1.74986909166855,2.51975558925653,5.75010257459886,0,0,0,0.514518872071894,0,0,0.606949382578793,0,0.633831403506179,0,0.889294796111139,0,0,0,9.28760342607055,12.6792040756113,0.207379224616955,0,0.420649922702764,7.42692559449889,7.06779331045163,0.122490799214954,0,0,11.0115880999389,4.85211884723713,5.52983519722476,0.395658863190582,0.640413505216868,0,6.42120897703176,2.8138130501584,3.36156145108982,1.76777151284201,1.13897344639282,0.931997229126503,0.151452386666368,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,1.75668478206928,1.04723353406728,0,0,0,0,6.14141621559773,2.28750301409313,0.502617408451458,1.04294592115366,2.04572365864264,3.94797284663164,2.27137768294861,0,0.248813941220186,0.758168275301024,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0,0,1.68231958851302,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.827810238914197,7.70642831941401,3.7507739709505,0.327869890753351,1.26235463602186,0,0.390438744296638,0,0,0.222798674082394,0,0.809621403349789,0,0,2.24924921495265,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.361877549568935,0.238744688006273,0,0,10.9400928186201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,1.38097570952153,2.29158205375759,1.20297227640581,3.42541259885321,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0.441596760403192,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.695603506861264 | |||
|short_description=p2@uc009jkd.1 | |||
}} |
Revision as of 11:35, 14 September 2013
Short description: | p2@uc009jkd.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc009jkd.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | -18bp_to_uc009jkd.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.81e-14 | 8 |
neural cell | 3.84e-12 | 43 |
ectodermal cell | 9.02e-12 | 44 |
neurectodermal cell | 9.02e-12 | 44 |
migratory neural crest cell | 5.30e-11 | 10 |
neuron associated cell | 5.30e-11 | 10 |
glial cell (sensu Vertebrata) | 5.30e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 5.30e-11 | 10 |
glial cell | 5.30e-11 | 10 |
glioblast | 5.30e-11 | 10 |
glioblast (sensu Vertebrata) | 5.30e-11 | 10 |
oligodendrocyte | 1.50e-09 | 6 |
macroglial cell | 1.50e-09 | 6 |
astrocyte | 1.50e-09 | 6 |
CNS neuron (sensu Vertebrata) | 1.91e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-08 | 23 |
raphe nuclei neuron | 3.13e-08 | 3 |
neuron of the substantia nigra | 9.53e-08 | 3 |
embryonic cell | 9.84e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.