FFCP PHASE1:Mm9::chr7:20550809..20550816,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71601|HGNC=|MCL_coexpression_id=12|UniProt=Q9D2Z1|association_with_transcript=48bp_to_ENSMUST00000094753,NM_027839,uc012fbl.1_5end|description=CAGE_peak_4_at_Ceacam20_5end|id=chr7:20550809..20550816,+|ontology_enrichment_celltype=CL:0000239!1.28e-14!6;CL:0000677!1.28e-14!6;CL:0000212!1.28e-14!6;CL:0000584!1.28e-14!6;CL:0000075!2.04e-12!7;CL:0002563!2.31e-12!9;CL:0002251!2.31e-12!9;CL:0000066!1.89e-09!25;CL:0000473!5.33e-08!3;CL:0000627!5.33e-08!3;CL:0000682!5.33e-08!3;CL:0002076!5.66e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,4.22e-13,3;CL:0000239,3.37e-12,6;CL:0000677,3.37e-12,6;CL:0000584,3.37e-12,6;CL:0000075,1.79e-10,7;CL:0002563,3.64e-08,9;CL:0002251,3.64e-08,9;CL:0000066,9.23e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.80e-27!43;UBERON:0000344!2.64e-25!15;UBERON:0001242!4.36e-21!13;UBERON:0000060!4.36e-21!13;UBERON:0001262!4.36e-21!13;UBERON:0004786!4.36e-21!13;UBERON:0005409!9.13e-20!59;UBERON:0004923!1.22e-14!24;UBERON:0003350!2.31e-12!9;UBERON:0004808!2.31e-12!9;UBERON:0001277!2.31e-12!9;UBERON:0001007!7.30e-12!128;UBERON:0001555!7.30e-12!128;UBERON:0007026!7.30e-12!128;UBERON:0004119!1.44e-11!130;UBERON:0000925!1.44e-11!130;UBERON:0006595!1.44e-11!130;UBERON:0004921!4.64e-10!126;UBERON:0004185!4.64e-10!126;UBERON:0000485!6.54e-10!11;UBERON:0000331!2.94e-08!3;UBERON:0002116!2.94e-08!3;UBERON:0001204!2.94e-08!3;UBERON:0001168!2.94e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.04e-33,31;UBERON:0000344,1.16e-27,15;UBERON:0005409,6.66e-21,47;UBERON:0001242,6.87e-21,13;UBERON:0001262,6.87e-21,13;UBERON:0004786,6.87e-21,13;UBERON:0002108,3.44e-17,4;UBERON:0004923,1.02e-16,24;UBERON:0000331,1.45e-13,3;UBERON:0002116,1.45e-13,3;UBERON:0001204,1.45e-13,3;UBERON:0001168,1.45e-13,3;UBERON:0001155,7.45e-10,2;UBERON:0000059,7.45e-10,2;UBERON:0001962,3.56e-09,2;UBERON:0001961,3.56e-09,2;UBERON:0001744,3.56e-09,2;UBERON:0001007,4.08e-09,116;UBERON:0001555,4.08e-09,116;UBERON:0007026,4.08e-09,116;UBERON:0004119,6.56e-09,118;UBERON:0000925,6.56e-09,118;UBERON:0006595,6.56e-09,118;UBERON:0003350,3.64e-08,9;UBERON:0004808,3.64e-08,9;UBERON:0001277,3.64e-08,9;UBERON:0004921,5.21e-07,114|phase1_expression=0,2.79180326111489,3.63999391511629,6.95667686005709,4.50806156951712,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,2.29692785646008,3.4460959692726,1.50829862880122,5.32065574477847,1.76421090831952,2.88249663851896,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5471701023357,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0.494096864172033,0.754005626400808,0.795825888164603,1.16978452271472,2.69645822596266,2.16138049874694,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Ceacam20}} | ||
|EntrezGene=71601 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9D2Z1 | |||
|association_with_transcript=48bp_to_ENSMUST00000094753,NM_027839,uc012fbl.1_5end | |||
|description=CAGE_peak_4_at_Ceacam20_5end | |||
|id=chr7:20550809..20550816,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.28e-14!6;CL:0000677!1.28e-14!6;CL:0000212!1.28e-14!6;CL:0000584!1.28e-14!6;CL:0000075!2.04e-12!7;CL:0002563!2.31e-12!9;CL:0002251!2.31e-12!9;CL:0000066!1.89e-09!25;CL:0000473!5.33e-08!3;CL:0000627!5.33e-08!3;CL:0000682!5.33e-08!3;CL:0002076!5.66e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.22e-13,3;CL:0000239,3.37e-12,6;CL:0000677,3.37e-12,6;CL:0000584,3.37e-12,6;CL:0000075,1.79e-10,7;CL:0002563,3.64e-08,9;CL:0002251,3.64e-08,9;CL:0000066,9.23e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.80e-27!43;UBERON:0000344!2.64e-25!15;UBERON:0001242!4.36e-21!13;UBERON:0000060!4.36e-21!13;UBERON:0001262!4.36e-21!13;UBERON:0004786!4.36e-21!13;UBERON:0005409!9.13e-20!59;UBERON:0004923!1.22e-14!24;UBERON:0003350!2.31e-12!9;UBERON:0004808!2.31e-12!9;UBERON:0001277!2.31e-12!9;UBERON:0001007!7.30e-12!128;UBERON:0001555!7.30e-12!128;UBERON:0007026!7.30e-12!128;UBERON:0004119!1.44e-11!130;UBERON:0000925!1.44e-11!130;UBERON:0006595!1.44e-11!130;UBERON:0004921!4.64e-10!126;UBERON:0004185!4.64e-10!126;UBERON:0000485!6.54e-10!11;UBERON:0000331!2.94e-08!3;UBERON:0002116!2.94e-08!3;UBERON:0001204!2.94e-08!3;UBERON:0001168!2.94e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.04e-33,31;UBERON:0000344,1.16e-27,15;UBERON:0005409,6.66e-21,47;UBERON:0001242,6.87e-21,13;UBERON:0001262,6.87e-21,13;UBERON:0004786,6.87e-21,13;UBERON:0002108,3.44e-17,4;UBERON:0004923,1.02e-16,24;UBERON:0000331,1.45e-13,3;UBERON:0002116,1.45e-13,3;UBERON:0001204,1.45e-13,3;UBERON:0001168,1.45e-13,3;UBERON:0001155,7.45e-10,2;UBERON:0000059,7.45e-10,2;UBERON:0001962,3.56e-09,2;UBERON:0001961,3.56e-09,2;UBERON:0001744,3.56e-09,2;UBERON:0001007,4.08e-09,116;UBERON:0001555,4.08e-09,116;UBERON:0007026,4.08e-09,116;UBERON:0004119,6.56e-09,118;UBERON:0000925,6.56e-09,118;UBERON:0006595,6.56e-09,118;UBERON:0003350,3.64e-08,9;UBERON:0004808,3.64e-08,9;UBERON:0001277,3.64e-08,9;UBERON:0004921,5.21e-07,114 | |||
|phase1_expression=0,2.79180326111489,3.63999391511629,6.95667686005709,4.50806156951712,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,2.29692785646008,3.4460959692726,1.50829862880122,5.32065574477847,1.76421090831952,2.88249663851896,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5471701023357,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0.494096864172033,0.754005626400808,0.795825888164603,1.16978452271472,2.69645822596266,2.16138049874694,4.18196673834171,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Ceacam20 | |||
}} |
Revision as of 12:46, 14 September 2013
Short description: | p4@Ceacam20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ceacam20_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 48bp_to_ENSMUST00000094753, NM_027839, uc012fbl.1_5end |
EntrezGene: | Ceacam20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.22e-13 | 3 |
brush border epithelial cell | 3.37e-12 | 6 |
gut absorptive cell | 3.37e-12 | 6 |
enterocyte | 3.37e-12 | 6 |
columnar/cuboidal epithelial cell | 1.79e-10 | 7 |
intestinal epithelial cell | 3.64e-08 | 9 |
epithelial cell of alimentary canal | 3.64e-08 | 9 |
epithelial cell | 9.23e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.04e-33 | 31 |
mucosa | 1.16e-27 | 15 |
gastrointestinal system | 6.66e-21 | 47 |
intestinal mucosa | 6.87e-21 | 13 |
wall of intestine | 6.87e-21 | 13 |
gastrointestinal system mucosa | 6.87e-21 | 13 |
small intestine | 3.44e-17 | 4 |
organ component layer | 1.02e-16 | 24 |
ileal mucosa | 1.45e-13 | 3 |
ileum | 1.45e-13 | 3 |
mucosa of small intestine | 1.45e-13 | 3 |
wall of small intestine | 1.45e-13 | 3 |
colon | 7.45e-10 | 2 |
large intestine | 7.45e-10 | 2 |
gut-associated lymphoid tissue | 3.56e-09 | 2 |
mucosa-associated lymphoid tissue | 3.56e-09 | 2 |
lymphoid tissue | 3.56e-09 | 2 |
digestive system | 4.08e-09 | 116 |
digestive tract | 4.08e-09 | 116 |
primitive gut | 4.08e-09 | 116 |
endoderm-derived structure | 6.56e-09 | 118 |
endoderm | 6.56e-09 | 118 |
presumptive endoderm | 6.56e-09 | 118 |
epithelium of mucosa | 3.64e-08 | 9 |
gastrointestinal system epithelium | 3.64e-08 | 9 |
intestinal epithelium | 3.64e-08 | 9 |
subdivision of digestive tract | 5.21e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.