FFCP PHASE1:Mm9::chr7:38879614..38879629,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=285|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:38879614..38879629,+|id=chr7:38879614..38879629,+|ontology_enrichment_celltype=CL:0000791!1.60e-12!9;CL:0000789!1.60e-12!9;CL:0002420!1.60e-12!9;CL:0002419!1.60e-12!9;CL:0000790!1.60e-12!9;CL:0002031!1.98e-11!25;CL:0000084!3.96e-10!11;CL:0000827!3.96e-10!11;CL:0000624!4.32e-10!8;CL:0000838!3.13e-09!12;CL:0000553!3.21e-09!6;CL:0000556!3.21e-09!6;CL:0000893!9.09e-09!6;CL:0002489!9.09e-09!6;CL:0000898!9.09e-09!6;CL:0000809!9.09e-09!6;CL:0000810!9.09e-09!6;CL:0000895!9.09e-09!6;CL:0000808!9.09e-09!6;CL:0000894!9.09e-09!6;CL:0000806!9.09e-09!6;CL:0000807!9.09e-09!6;CL:0000805!9.09e-09!6;CL:0002425!9.09e-09!6;CL:0002436!9.09e-09!6;CL:0002427!9.09e-09!6;CL:0002428!9.09e-09!6;CL:0002429!9.09e-09!6;CL:0002433!9.09e-09!6;CL:0002431!9.09e-09!6;CL:0002432!9.09e-09!6;CL:0000988!1.60e-08!32;CL:0002032!1.60e-08!32;CL:0000037!1.60e-08!32;CL:0000566!1.60e-08!32;CL:0000837!1.60e-08!32;CL:0000542!1.80e-08!13;CL:0000051!1.80e-08!13|ontology_enrichment_celltype_v019_2=CL:0000624,2.81e-17,8;CL:0000815,4.83e-16,1;CL:0000792,4.83e-16,1;CL:0000791,1.89e-15,9;CL:0000789,1.89e-15,9;CL:0002420,1.89e-15,9;CL:0002419,1.89e-15,9;CL:0000790,1.89e-15,9;CL:0002031,5.68e-15,25;CL:0000084,8.70e-13,11;CL:0000827,8.70e-13,11;CL:0000988,8.41e-12,32;CL:0002032,8.41e-12,32;CL:0000037,8.41e-12,32;CL:0000837,8.41e-12,32;CL:0000838,8.73e-12,12;CL:0000542,6.16e-11,13;CL:0000051,6.16e-11,13;CL:0000893,8.53e-11,6;CL:0002489,8.53e-11,6;CL:0000898,8.53e-11,6;CL:0000809,8.53e-11,6;CL:0000810,8.53e-11,6;CL:0000895,8.53e-11,6;CL:0000808,8.53e-11,6;CL:0000894,8.53e-11,6;CL:0000806,8.53e-11,6;CL:0000807,8.53e-11,6;CL:0000805,8.53e-11,6;CL:0002425,8.53e-11,6;CL:0002436,8.53e-11,6;CL:0002427,8.53e-11,6;CL:0002428,8.53e-11,6;CL:0002429,8.53e-11,6;CL:0002433,8.53e-11,6;CL:0002431,8.53e-11,6;CL:0002432,8.53e-11,6;CL:0000553,1.66e-10,6;CL:0000556,1.66e-10,6;CL:0000738,1.57e-08,17;CL:0002087,1.57e-08,17;CL:0002320,2.48e-08,46;CL:0000134,2.48e-08,46;CL:0000050,2.54e-07,9;CL:0000219,3.79e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.67e-25!48;UBERON:0004177!1.90e-24!29;UBERON:0002390!2.39e-24!45;UBERON:0003061!2.39e-24!45;UBERON:0002370!3.18e-17!23;UBERON:0000974!3.18e-17!23;UBERON:0004807!3.18e-17!23;UBERON:0005058!3.18e-17!23;UBERON:0003351!3.18e-17!23;UBERON:0009113!3.18e-17!23;UBERON:0003295!3.18e-17!23;UBERON:0009722!3.18e-17!23;UBERON:0005562!3.18e-17!23;UBERON:0007690!3.18e-17!23;UBERON:0006562!2.08e-16!24;UBERON:0003408!2.08e-16!24;UBERON:0001557!2.08e-16!24;UBERON:0001042!2.08e-16!24;UBERON:0008814!2.08e-16!24;UBERON:0009145!2.08e-16!24;UBERON:0002405!5.33e-16!70;UBERON:0000072!2.52e-14!27;UBERON:0003081!3.69e-13!88;UBERON:0005057!1.79e-12!51;UBERON:0000065!6.80e-12!41;UBERON:0001004!1.52e-11!42;UBERON:0000063!1.61e-10!35;UBERON:0002106!1.04e-08!6;UBERON:0004457!1.04e-08!6;UBERON:0000042!1.04e-08!6;UBERON:0004854!1.04e-08!6;UBERON:0009034!1.04e-08!6;UBERON:0002095!1.04e-08!6;UBERON:0004782!1.04e-08!6;UBERON:0003281!1.04e-08!6;UBERON:0009664!1.04e-08!6;UBERON:0002296!1.04e-08!6;UBERON:0005602!1.04e-08!6;UBERON:0001179!1.04e-08!6;UBERON:0006293!1.04e-08!6;UBERON:0001041!2.58e-08!92;UBERON:0000077!1.09e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0000029,6.79e-16,1;UBERON:0001097,6.79e-16,1;UBERON:0003968,6.79e-16,1;UBERON:0001467,6.79e-16,1;UBERON:0002384,2.48e-08,46;UBERON:0002193,5.52e-08,48;UBERON:0002405,5.52e-08,48|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,0,0.234064526321993,0.171217968225505,0,2.39681021903688,4.28359971853087,0,0.607425802169478,0,1.57731082679119,1.50825876966313,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36619248741323,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.201932899896295,0.15241361331,0.504130925684203,0.292373642219257,0.384847366561318,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr7:38879614..38879629,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=285 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:38879614..38879629,+ | |||
|id=chr7:38879614..38879629,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.60e-12!9;CL:0000789!1.60e-12!9;CL:0002420!1.60e-12!9;CL:0002419!1.60e-12!9;CL:0000790!1.60e-12!9;CL:0002031!1.98e-11!25;CL:0000084!3.96e-10!11;CL:0000827!3.96e-10!11;CL:0000624!4.32e-10!8;CL:0000838!3.13e-09!12;CL:0000553!3.21e-09!6;CL:0000556!3.21e-09!6;CL:0000893!9.09e-09!6;CL:0002489!9.09e-09!6;CL:0000898!9.09e-09!6;CL:0000809!9.09e-09!6;CL:0000810!9.09e-09!6;CL:0000895!9.09e-09!6;CL:0000808!9.09e-09!6;CL:0000894!9.09e-09!6;CL:0000806!9.09e-09!6;CL:0000807!9.09e-09!6;CL:0000805!9.09e-09!6;CL:0002425!9.09e-09!6;CL:0002436!9.09e-09!6;CL:0002427!9.09e-09!6;CL:0002428!9.09e-09!6;CL:0002429!9.09e-09!6;CL:0002433!9.09e-09!6;CL:0002431!9.09e-09!6;CL:0002432!9.09e-09!6;CL:0000988!1.60e-08!32;CL:0002032!1.60e-08!32;CL:0000037!1.60e-08!32;CL:0000566!1.60e-08!32;CL:0000837!1.60e-08!32;CL:0000542!1.80e-08!13;CL:0000051!1.80e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.81e-17,8;CL:0000815,4.83e-16,1;CL:0000792,4.83e-16,1;CL:0000791,1.89e-15,9;CL:0000789,1.89e-15,9;CL:0002420,1.89e-15,9;CL:0002419,1.89e-15,9;CL:0000790,1.89e-15,9;CL:0002031,5.68e-15,25;CL:0000084,8.70e-13,11;CL:0000827,8.70e-13,11;CL:0000988,8.41e-12,32;CL:0002032,8.41e-12,32;CL:0000037,8.41e-12,32;CL:0000837,8.41e-12,32;CL:0000838,8.73e-12,12;CL:0000542,6.16e-11,13;CL:0000051,6.16e-11,13;CL:0000893,8.53e-11,6;CL:0002489,8.53e-11,6;CL:0000898,8.53e-11,6;CL:0000809,8.53e-11,6;CL:0000810,8.53e-11,6;CL:0000895,8.53e-11,6;CL:0000808,8.53e-11,6;CL:0000894,8.53e-11,6;CL:0000806,8.53e-11,6;CL:0000807,8.53e-11,6;CL:0000805,8.53e-11,6;CL:0002425,8.53e-11,6;CL:0002436,8.53e-11,6;CL:0002427,8.53e-11,6;CL:0002428,8.53e-11,6;CL:0002429,8.53e-11,6;CL:0002433,8.53e-11,6;CL:0002431,8.53e-11,6;CL:0002432,8.53e-11,6;CL:0000553,1.66e-10,6;CL:0000556,1.66e-10,6;CL:0000738,1.57e-08,17;CL:0002087,1.57e-08,17;CL:0002320,2.48e-08,46;CL:0000134,2.48e-08,46;CL:0000050,2.54e-07,9;CL:0000219,3.79e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.67e-25!48;UBERON:0004177!1.90e-24!29;UBERON:0002390!2.39e-24!45;UBERON:0003061!2.39e-24!45;UBERON:0002370!3.18e-17!23;UBERON:0000974!3.18e-17!23;UBERON:0004807!3.18e-17!23;UBERON:0005058!3.18e-17!23;UBERON:0003351!3.18e-17!23;UBERON:0009113!3.18e-17!23;UBERON:0003295!3.18e-17!23;UBERON:0009722!3.18e-17!23;UBERON:0005562!3.18e-17!23;UBERON:0007690!3.18e-17!23;UBERON:0006562!2.08e-16!24;UBERON:0003408!2.08e-16!24;UBERON:0001557!2.08e-16!24;UBERON:0001042!2.08e-16!24;UBERON:0008814!2.08e-16!24;UBERON:0009145!2.08e-16!24;UBERON:0002405!5.33e-16!70;UBERON:0000072!2.52e-14!27;UBERON:0003081!3.69e-13!88;UBERON:0005057!1.79e-12!51;UBERON:0000065!6.80e-12!41;UBERON:0001004!1.52e-11!42;UBERON:0000063!1.61e-10!35;UBERON:0002106!1.04e-08!6;UBERON:0004457!1.04e-08!6;UBERON:0000042!1.04e-08!6;UBERON:0004854!1.04e-08!6;UBERON:0009034!1.04e-08!6;UBERON:0002095!1.04e-08!6;UBERON:0004782!1.04e-08!6;UBERON:0003281!1.04e-08!6;UBERON:0009664!1.04e-08!6;UBERON:0002296!1.04e-08!6;UBERON:0005602!1.04e-08!6;UBERON:0001179!1.04e-08!6;UBERON:0006293!1.04e-08!6;UBERON:0001041!2.58e-08!92;UBERON:0000077!1.09e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,6.79e-16,1;UBERON:0001097,6.79e-16,1;UBERON:0003968,6.79e-16,1;UBERON:0001467,6.79e-16,1;UBERON:0002384,2.48e-08,46;UBERON:0002193,5.52e-08,48;UBERON:0002405,5.52e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,0,0.234064526321993,0.171217968225505,0,2.39681021903688,4.28359971853087,0,0.607425802169478,0,1.57731082679119,1.50825876966313,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36619248741323,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0.201932899896295,0.15241361331,0.504130925684203,0.292373642219257,0.384847366561318,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr7:38879614..38879629,+ | |||
}} |
Revision as of 13:25, 14 September 2013
Short description: | p@chr7:38879614..38879629, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:38879614..38879629, + |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 6.79e-16 | 1 |
axillary lymph node | 6.79e-16 | 1 |
peripheral lymph node | 6.79e-16 | 1 |
shoulder | 6.79e-16 | 1 |
connective tissue | 2.48e-08 | 46 |
hemolymphoid system | 5.52e-08 | 48 |
immune system | 5.52e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.