FFCP PHASE1:Mm9::chr8:35279878..35279900,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3171|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:35279878..35279900,+|id=chr8:35279878..35279900,+|ontology_enrichment_celltype=CL:0000084!9.80e-14!11;CL:0000827!9.80e-14!11;CL:0000838!2.52e-12!12;CL:0000791!2.91e-12!9;CL:0000789!2.91e-12!9;CL:0002420!2.91e-12!9;CL:0002419!2.91e-12!9;CL:0000790!2.91e-12!9;CL:0000542!3.89e-11!13;CL:0000051!3.89e-11!13;CL:0000624!7.47e-11!8;CL:0000988!1.02e-10!32;CL:0002032!1.02e-10!32;CL:0000037!1.02e-10!32;CL:0000566!1.02e-10!32;CL:0000837!1.02e-10!32;CL:0000893!3.42e-08!6;CL:0002489!3.42e-08!6;CL:0000898!3.42e-08!6;CL:0000809!3.42e-08!6;CL:0000810!3.42e-08!6;CL:0000895!3.42e-08!6;CL:0000808!3.42e-08!6;CL:0000894!3.42e-08!6;CL:0000806!3.42e-08!6;CL:0000807!3.42e-08!6;CL:0000805!3.42e-08!6;CL:0002425!3.42e-08!6;CL:0002436!3.42e-08!6;CL:0002427!3.42e-08!6;CL:0002428!3.42e-08!6;CL:0002429!3.42e-08!6;CL:0002433!3.42e-08!6;CL:0002431!3.42e-08!6;CL:0002432!3.42e-08!6;CL:0000738!8.27e-08!17;CL:0002087!8.27e-08!17;CL:0002031!1.30e-07!25;CL:0002320!9.00e-07!46;CL:0000134!9.00e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-25,9;CL:0000789,1.56e-25,9;CL:0002420,1.56e-25,9;CL:0002419,1.56e-25,9;CL:0000790,1.56e-25,9;CL:0000084,7.43e-21,11;CL:0000827,7.43e-21,11;CL:0000624,4.82e-20,8;CL:0000838,4.24e-19,12;CL:0000542,1.30e-17,13;CL:0000051,1.30e-17,13;CL:0000738,2.10e-13,17;CL:0002087,2.10e-13,17;CL:0000893,2.49e-10,6;CL:0002489,2.49e-10,6;CL:0000898,2.49e-10,6;CL:0000809,2.49e-10,6;CL:0000810,2.49e-10,6;CL:0000895,2.49e-10,6;CL:0000808,2.49e-10,6;CL:0000894,2.49e-10,6;CL:0000806,2.49e-10,6;CL:0000807,2.49e-10,6;CL:0000805,2.49e-10,6;CL:0002425,2.49e-10,6;CL:0002436,2.49e-10,6;CL:0002427,2.49e-10,6;CL:0002428,2.49e-10,6;CL:0002429,2.49e-10,6;CL:0002433,2.49e-10,6;CL:0002431,2.49e-10,6;CL:0002432,2.49e-10,6;CL:0002031,5.20e-09,25;CL:0000625,5.41e-08,1;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1;CL:0000988,5.88e-07,32;CL:0002032,5.88e-07,32;CL:0000037,5.88e-07,32;CL:0000837,5.88e-07,32;CL:0000355,6.25e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.11e-19,3;DOID:4045,1.11e-19,3;DOID:0050686,3.83e-10,6|ontology_enrichment_uberon=UBERON:0004177!2.05e-12!29;UBERON:0002193!3.70e-11!48;UBERON:0002390!4.83e-11!45;UBERON:0003061!4.83e-11!45;UBERON:0000072!6.47e-11!27;UBERON:0002370!1.66e-10!23;UBERON:0000974!1.66e-10!23;UBERON:0004807!1.66e-10!23;UBERON:0005058!1.66e-10!23;UBERON:0003351!1.66e-10!23;UBERON:0009113!1.66e-10!23;UBERON:0003295!1.66e-10!23;UBERON:0009722!1.66e-10!23;UBERON:0005562!1.66e-10!23;UBERON:0007690!1.66e-10!23;UBERON:0000065!2.81e-10!41;UBERON:0006562!6.98e-10!24;UBERON:0003408!6.98e-10!24;UBERON:0001557!6.98e-10!24;UBERON:0001042!6.98e-10!24;UBERON:0008814!6.98e-10!24;UBERON:0009145!6.98e-10!24;UBERON:0001004!7.00e-10!42;UBERON:0002405!1.51e-07!70;UBERON:0000063!2.63e-07!35;UBERON:0005057!5.29e-07!51;UBERON:0002384!9.00e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.53e-07,1;UBERON:0001097,1.53e-07,1;UBERON:0003968,1.53e-07,1;UBERON:0001467,1.53e-07,1;UBERON:0001134,6.25e-07,9;UBERON:0002036,6.25e-07,9;UBERON:0002385,6.25e-07,9;UBERON:0000486,6.25e-07,9;UBERON:0007503,6.25e-07,9;UBERON:0001015,6.25e-07,9;UBERON:0002329,6.25e-07,9;UBERON:0003082,6.25e-07,9;UBERON:0003059,6.25e-07,9;UBERON:0007282,6.25e-07,9;UBERON:0004290,6.25e-07,9;UBERON:0009618,6.25e-07,9|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,3.23814060948833,0.70219357896598,0.34243593645101,0.0797721589953364,5.47842335779858,2.62261207256992,0,0,0.699561878128147,0.315462165358238,0.411343300817216,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0,0.204169356262369,2.51118978442145,8.5946887897618,1.57057123192139,1.17646297606203,0.683045484958446,2.91306211818692,0,0,0,0,0,0,0,0,0,0,5.07753499407941,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,2.07150306917737,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.359445373517761,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.679913719975421,1.81936888020755,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0.39736270956253,0.721172697119813,0.295379054349154,0.100966449948148,0.457240839929999,0.302478555410522,0.292373642219257,0,0.701261413089414,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr8:35279878..35279900,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3171 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:35279878..35279900,+ | |||
|id=chr8:35279878..35279900,+ | |||
|ontology_enrichment_celltype=CL:0000084!9.80e-14!11;CL:0000827!9.80e-14!11;CL:0000838!2.52e-12!12;CL:0000791!2.91e-12!9;CL:0000789!2.91e-12!9;CL:0002420!2.91e-12!9;CL:0002419!2.91e-12!9;CL:0000790!2.91e-12!9;CL:0000542!3.89e-11!13;CL:0000051!3.89e-11!13;CL:0000624!7.47e-11!8;CL:0000988!1.02e-10!32;CL:0002032!1.02e-10!32;CL:0000037!1.02e-10!32;CL:0000566!1.02e-10!32;CL:0000837!1.02e-10!32;CL:0000893!3.42e-08!6;CL:0002489!3.42e-08!6;CL:0000898!3.42e-08!6;CL:0000809!3.42e-08!6;CL:0000810!3.42e-08!6;CL:0000895!3.42e-08!6;CL:0000808!3.42e-08!6;CL:0000894!3.42e-08!6;CL:0000806!3.42e-08!6;CL:0000807!3.42e-08!6;CL:0000805!3.42e-08!6;CL:0002425!3.42e-08!6;CL:0002436!3.42e-08!6;CL:0002427!3.42e-08!6;CL:0002428!3.42e-08!6;CL:0002429!3.42e-08!6;CL:0002433!3.42e-08!6;CL:0002431!3.42e-08!6;CL:0002432!3.42e-08!6;CL:0000738!8.27e-08!17;CL:0002087!8.27e-08!17;CL:0002031!1.30e-07!25;CL:0002320!9.00e-07!46;CL:0000134!9.00e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-25,9;CL:0000789,1.56e-25,9;CL:0002420,1.56e-25,9;CL:0002419,1.56e-25,9;CL:0000790,1.56e-25,9;CL:0000084,7.43e-21,11;CL:0000827,7.43e-21,11;CL:0000624,4.82e-20,8;CL:0000838,4.24e-19,12;CL:0000542,1.30e-17,13;CL:0000051,1.30e-17,13;CL:0000738,2.10e-13,17;CL:0002087,2.10e-13,17;CL:0000893,2.49e-10,6;CL:0002489,2.49e-10,6;CL:0000898,2.49e-10,6;CL:0000809,2.49e-10,6;CL:0000810,2.49e-10,6;CL:0000895,2.49e-10,6;CL:0000808,2.49e-10,6;CL:0000894,2.49e-10,6;CL:0000806,2.49e-10,6;CL:0000807,2.49e-10,6;CL:0000805,2.49e-10,6;CL:0002425,2.49e-10,6;CL:0002436,2.49e-10,6;CL:0002427,2.49e-10,6;CL:0002428,2.49e-10,6;CL:0002429,2.49e-10,6;CL:0002433,2.49e-10,6;CL:0002431,2.49e-10,6;CL:0002432,2.49e-10,6;CL:0002031,5.20e-09,25;CL:0000625,5.41e-08,1;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1;CL:0000988,5.88e-07,32;CL:0002032,5.88e-07,32;CL:0000037,5.88e-07,32;CL:0000837,5.88e-07,32;CL:0000355,6.25e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.11e-19,3;DOID:4045,1.11e-19,3;DOID:0050686,3.83e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.05e-12!29;UBERON:0002193!3.70e-11!48;UBERON:0002390!4.83e-11!45;UBERON:0003061!4.83e-11!45;UBERON:0000072!6.47e-11!27;UBERON:0002370!1.66e-10!23;UBERON:0000974!1.66e-10!23;UBERON:0004807!1.66e-10!23;UBERON:0005058!1.66e-10!23;UBERON:0003351!1.66e-10!23;UBERON:0009113!1.66e-10!23;UBERON:0003295!1.66e-10!23;UBERON:0009722!1.66e-10!23;UBERON:0005562!1.66e-10!23;UBERON:0007690!1.66e-10!23;UBERON:0000065!2.81e-10!41;UBERON:0006562!6.98e-10!24;UBERON:0003408!6.98e-10!24;UBERON:0001557!6.98e-10!24;UBERON:0001042!6.98e-10!24;UBERON:0008814!6.98e-10!24;UBERON:0009145!6.98e-10!24;UBERON:0001004!7.00e-10!42;UBERON:0002405!1.51e-07!70;UBERON:0000063!2.63e-07!35;UBERON:0005057!5.29e-07!51;UBERON:0002384!9.00e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.53e-07,1;UBERON:0001097,1.53e-07,1;UBERON:0003968,1.53e-07,1;UBERON:0001467,1.53e-07,1;UBERON:0001134,6.25e-07,9;UBERON:0002036,6.25e-07,9;UBERON:0002385,6.25e-07,9;UBERON:0000486,6.25e-07,9;UBERON:0007503,6.25e-07,9;UBERON:0001015,6.25e-07,9;UBERON:0002329,6.25e-07,9;UBERON:0003082,6.25e-07,9;UBERON:0003059,6.25e-07,9;UBERON:0007282,6.25e-07,9;UBERON:0004290,6.25e-07,9;UBERON:0009618,6.25e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,3.23814060948833,0.70219357896598,0.34243593645101,0.0797721589953364,5.47842335779858,2.62261207256992,0,0,0.699561878128147,0.315462165358238,0.411343300817216,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0,0.204169356262369,2.51118978442145,8.5946887897618,1.57057123192139,1.17646297606203,0.683045484958446,2.91306211818692,0,0,0,0,0,0,0,0,0,0,5.07753499407941,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,0,2.07150306917737,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.359445373517761,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.679913719975421,1.81936888020755,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0.39736270956253,0.721172697119813,0.295379054349154,0.100966449948148,0.457240839929999,0.302478555410522,0.292373642219257,0,0.701261413089414,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:35279878..35279900,+ | |||
}} |
Revision as of 15:32, 14 September 2013
Short description: | p@chr8:35279878..35279900, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:35279878..35279900, + |
Coexpression cluster: | MCL_coexpression_mm9:3171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.53e-07 | 1 |
axillary lymph node | 1.53e-07 | 1 |
peripheral lymph node | 1.53e-07 | 1 |
shoulder | 1.53e-07 | 1 |
skeletal muscle tissue | 6.25e-07 | 9 |
striated muscle tissue | 6.25e-07 | 9 |
muscle tissue | 6.25e-07 | 9 |
multilaminar epithelium | 6.25e-07 | 9 |
epithelial vesicle | 6.25e-07 | 9 |
musculature | 6.25e-07 | 9 |
somite | 6.25e-07 | 9 |
myotome | 6.25e-07 | 9 |
presomitic mesoderm | 6.25e-07 | 9 |
presumptive segmental plate | 6.25e-07 | 9 |
dermomyotome | 6.25e-07 | 9 |
trunk paraxial mesoderm | 6.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.11e-19 | 3 |
muscle cancer | 1.11e-19 | 3 |
organ system cancer | 3.83e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.