FFCP PHASE1:Mm9::chr9:121207864..121207875,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:121207864..121207875,+|id=chr9:121207864..121207875,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,7.36e-30,6;CL:0000677,7.36e-30,6;CL:0000584,7.36e-30,6;CL:0000075,1.11e-25,7;CL:0002563,4.19e-20,9;CL:0002251,4.19e-20,9;CL:0000066,7.95e-16,25;CL:0000682,3.97e-15,3;CL:0002076,2.93e-12,15;CL:0000223,2.69e-09,20;CL:0000473,5.00e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.19e-09!15;UBERON:0000160!4.71e-09!43;UBERON:0001242!6.41e-09!13;UBERON:0000060!6.41e-09!13;UBERON:0001262!6.41e-09!13;UBERON:0004786!6.41e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.19e-20,9;UBERON:0004808,4.19e-20,9;UBERON:0001277,4.19e-20,9;UBERON:0000485,1.52e-16,11;UBERON:0001242,4.48e-14,13;UBERON:0001262,4.48e-14,13;UBERON:0004786,4.48e-14,13;UBERON:0000160,6.17e-13,31;UBERON:0000344,2.93e-12,15;UBERON:0005409,1.51e-08,47;UBERON:0004923,8.31e-08,24;UBERON:0001155,9.80e-07,2;UBERON:0000059,9.80e-07,2|phase1_expression=0,2.44282785347553,2.27499619694768,8.77146212789807,8.01433167914156,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.630924330716475,0.274228867211478,0,0.0850432901510698,0,0,0.159992422793407,0,1.14846392823004,2.15380998079537,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.243206428637567,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0.991256348951394,3.43785736662608,0,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0|short_description=p@chr9:121207864..121207875,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:121207864..121207875,+ | |||
|id=chr9:121207864..121207875,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.36e-30,6;CL:0000677,7.36e-30,6;CL:0000584,7.36e-30,6;CL:0000075,1.11e-25,7;CL:0002563,4.19e-20,9;CL:0002251,4.19e-20,9;CL:0000066,7.95e-16,25;CL:0000682,3.97e-15,3;CL:0002076,2.93e-12,15;CL:0000223,2.69e-09,20;CL:0000473,5.00e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.19e-09!15;UBERON:0000160!4.71e-09!43;UBERON:0001242!6.41e-09!13;UBERON:0000060!6.41e-09!13;UBERON:0001262!6.41e-09!13;UBERON:0004786!6.41e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.19e-20,9;UBERON:0004808,4.19e-20,9;UBERON:0001277,4.19e-20,9;UBERON:0000485,1.52e-16,11;UBERON:0001242,4.48e-14,13;UBERON:0001262,4.48e-14,13;UBERON:0004786,4.48e-14,13;UBERON:0000160,6.17e-13,31;UBERON:0000344,2.93e-12,15;UBERON:0005409,1.51e-08,47;UBERON:0004923,8.31e-08,24;UBERON:0001155,9.80e-07,2;UBERON:0000059,9.80e-07,2 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,8.77146212789807,8.01433167914156,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.630924330716475,0.274228867211478,0,0.0850432901510698,0,0,0.159992422793407,0,1.14846392823004,2.15380998079537,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.243206428637567,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0.991256348951394,3.43785736662608,0,0,0,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr9:121207864..121207875,+ | |||
}} |
Revision as of 17:11, 14 September 2013
Short description: | p@chr9:121207864..121207875, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121207864..121207875, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.36e-30 | 6 |
gut absorptive cell | 7.36e-30 | 6 |
enterocyte | 7.36e-30 | 6 |
columnar/cuboidal epithelial cell | 1.11e-25 | 7 |
intestinal epithelial cell | 4.19e-20 | 9 |
epithelial cell of alimentary canal | 4.19e-20 | 9 |
epithelial cell | 7.95e-16 | 25 |
M cell of gut | 3.97e-15 | 3 |
endo-epithelial cell | 2.93e-12 | 15 |
endodermal cell | 2.69e-09 | 20 |
defensive cell | 5.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.19e-20 | 9 |
gastrointestinal system epithelium | 4.19e-20 | 9 |
intestinal epithelium | 4.19e-20 | 9 |
simple columnar epithelium | 1.52e-16 | 11 |
intestinal mucosa | 4.48e-14 | 13 |
wall of intestine | 4.48e-14 | 13 |
gastrointestinal system mucosa | 4.48e-14 | 13 |
intestine | 6.17e-13 | 31 |
mucosa | 2.93e-12 | 15 |
gastrointestinal system | 1.51e-08 | 47 |
organ component layer | 8.31e-08 | 24 |
colon | 9.80e-07 | 2 |
large intestine | 9.80e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.