FFCP PHASE1:Mm9::chrX:7221358..7221370,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20977|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=323bp_to_ENSMUST00000134355_5end|description=CAGE_peak_3_at_Syp_5end|id=chrX:7221358..7221370,+|ontology_enrichment_celltype=CL:0000117!3.93e-17!23;CL:0000337!3.93e-17!23;CL:0000540!4.73e-17!33;CL:0000047!4.73e-17!33;CL:0000031!4.73e-17!33;CL:0000404!4.73e-17!33;CL:0000221!2.73e-14!44;CL:0000133!2.73e-14!44;CL:0002319!1.45e-13!43;CL:0000393!2.76e-13!39;CL:0000211!2.76e-13!39;CL:0000055!1.34e-10!50;CL:0002321!7.38e-07!70;CL:0000220!7.38e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.97e-14,23;CL:0000337,1.97e-14,23;CL:0002610,2.32e-10,3;CL:0002614,5.46e-10,3;CL:0000540,1.97e-09,33;CL:0000047,1.97e-09,33;CL:0000031,1.97e-09,33;CL:0000404,1.97e-09,33;CL:0000393,1.14e-07,39;CL:0000211,1.14e-07,39;CL:0002611,2.60e-07,2;CL:0002319,9.07e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.45e-39!75;UBERON:0001016!7.45e-39!75;UBERON:0001017!7.48e-39!73;UBERON:0005743!7.48e-39!73;UBERON:0004121!1.18e-35!102;UBERON:0000924!1.18e-35!102;UBERON:0006601!1.18e-35!102;UBERON:0000033!2.02e-33!63;UBERON:0002346!5.10e-33!71;UBERON:0003075!5.10e-33!71;UBERON:0007284!5.10e-33!71;UBERON:0001049!5.11e-33!52;UBERON:0005068!5.11e-33!52;UBERON:0006241!5.11e-33!52;UBERON:0007135!5.11e-33!52;UBERON:0000955!1.01e-30!50;UBERON:0006238!1.01e-30!50;UBERON:0002616!1.10e-29!49;UBERON:0002020!5.17e-28!34;UBERON:0003056!2.11e-27!49;UBERON:0003080!4.19e-25!40;UBERON:0002780!5.14e-24!39;UBERON:0001890!5.14e-24!39;UBERON:0006240!5.14e-24!39;UBERON:0002791!4.14e-22!29;UBERON:0003528!4.14e-22!29;UBERON:0001893!4.14e-22!29;UBERON:0007811!8.43e-22!86;UBERON:0000153!9.35e-19!94;UBERON:0000956!6.97e-16!21;UBERON:0001869!6.97e-16!21;UBERON:0000203!6.97e-16!21;UBERON:0002021!8.42e-15!10;UBERON:0000411!8.42e-15!10;UBERON:0001950!8.42e-15!10;UBERON:0002619!2.80e-14!17;UBERON:0000025!1.82e-08!114;UBERON:0002240!2.03e-08!6;UBERON:0005174!2.03e-08!6;UBERON:0001137!2.03e-08!6;UBERON:0004111!2.38e-08!122;UBERON:0002298!2.57e-08!6;UBERON:0003076!3.74e-08!12;UBERON:0003057!3.74e-08!12;UBERON:0002420!2.31e-07!8;UBERON:0007245!2.31e-07!8;UBERON:0010009!2.31e-07!8;UBERON:0010011!2.31e-07!8;UBERON:0000454!2.31e-07!8;UBERON:0001948!3.27e-07!5;UBERON:0002315!3.27e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.86e-35,54;UBERON:0002021,4.93e-32,10;UBERON:0000411,4.93e-32,10;UBERON:0001950,4.93e-32,10;UBERON:0001049,1.52e-30,52;UBERON:0005068,1.52e-30,52;UBERON:0006241,1.52e-30,52;UBERON:0007135,1.52e-30,52;UBERON:0001017,3.16e-29,73;UBERON:0001016,2.56e-28,75;UBERON:0002020,2.71e-27,34;UBERON:0002346,5.94e-24,64;UBERON:0003075,5.94e-24,64;UBERON:0007284,5.94e-24,64;UBERON:0002619,1.26e-21,17;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0002616,4.80e-21,46;UBERON:0000955,1.63e-20,47;UBERON:0006238,1.63e-20,47;UBERON:0010371,2.00e-20,73;UBERON:0003080,1.19e-19,40;UBERON:0003528,2.35e-19,29;UBERON:0002791,2.35e-19,29;UBERON:0001893,2.35e-19,29;UBERON:0002780,6.41e-18,39;UBERON:0001890,6.41e-18,39;UBERON:0006240,6.41e-18,39;UBERON:0000956,4.30e-17,21;UBERON:0001869,4.30e-17,21;UBERON:0000203,4.30e-17,21;UBERON:0003056,2.18e-15,49;UBERON:0010314,3.09e-15,92;UBERON:0002240,7.27e-13,6;UBERON:0005174,7.27e-13,6;UBERON:0001137,7.27e-13,6;UBERON:0002950,2.19e-12,4;UBERON:0001891,2.19e-12,4;UBERON:0009616,2.19e-12,4;UBERON:0010286,2.19e-12,4;UBERON:0003076,1.13e-11,12;UBERON:0003057,1.13e-11,12;UBERON:0000025,2.23e-11,114;UBERON:0004684,2.32e-10,3;UBERON:0002275,2.32e-10,3;UBERON:0004111,2.55e-10,122;UBERON:0001948,3.40e-10,5;UBERON:0002315,3.40e-10,5;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0011216,7.98e-08,194;UBERON:0002256,2.60e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0,0.675029691658453,0.210324961351382,3.42781181284564,4.41737081903227,0.489963196859816,0.479227355091182,0,6.60695285996332,4.21368215681119,3.99376986466233,0.263772575460388,0.731901148819277,0,8.65467296904281,2.25105044012672,2.29197371665215,2.35702868378934,2.56269025438385,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,2.51336048176146,0,0,0,0,1.04853447583376,0.457500602818626,0.376963056338593,0.521472960576829,1.02286182932132,1.87009240103604,1.62241263067758,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.20365132784531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| ||
|EntrezGene=20977 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt= | |||
|association_with_transcript=323bp_to_ENSMUST00000134355_5end | |||
|description=CAGE_peak_3_at_Syp_5end | |||
|id=chrX:7221358..7221370,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.93e-17!23;CL:0000337!3.93e-17!23;CL:0000540!4.73e-17!33;CL:0000047!4.73e-17!33;CL:0000031!4.73e-17!33;CL:0000404!4.73e-17!33;CL:0000221!2.73e-14!44;CL:0000133!2.73e-14!44;CL:0002319!1.45e-13!43;CL:0000393!2.76e-13!39;CL:0000211!2.76e-13!39;CL:0000055!1.34e-10!50;CL:0002321!7.38e-07!70;CL:0000220!7.38e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.97e-14,23;CL:0000337,1.97e-14,23;CL:0002610,2.32e-10,3;CL:0002614,5.46e-10,3;CL:0000540,1.97e-09,33;CL:0000047,1.97e-09,33;CL:0000031,1.97e-09,33;CL:0000404,1.97e-09,33;CL:0000393,1.14e-07,39;CL:0000211,1.14e-07,39;CL:0002611,2.60e-07,2;CL:0002319,9.07e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.45e-39!75;UBERON:0001016!7.45e-39!75;UBERON:0001017!7.48e-39!73;UBERON:0005743!7.48e-39!73;UBERON:0004121!1.18e-35!102;UBERON:0000924!1.18e-35!102;UBERON:0006601!1.18e-35!102;UBERON:0000033!2.02e-33!63;UBERON:0002346!5.10e-33!71;UBERON:0003075!5.10e-33!71;UBERON:0007284!5.10e-33!71;UBERON:0001049!5.11e-33!52;UBERON:0005068!5.11e-33!52;UBERON:0006241!5.11e-33!52;UBERON:0007135!5.11e-33!52;UBERON:0000955!1.01e-30!50;UBERON:0006238!1.01e-30!50;UBERON:0002616!1.10e-29!49;UBERON:0002020!5.17e-28!34;UBERON:0003056!2.11e-27!49;UBERON:0003080!4.19e-25!40;UBERON:0002780!5.14e-24!39;UBERON:0001890!5.14e-24!39;UBERON:0006240!5.14e-24!39;UBERON:0002791!4.14e-22!29;UBERON:0003528!4.14e-22!29;UBERON:0001893!4.14e-22!29;UBERON:0007811!8.43e-22!86;UBERON:0000153!9.35e-19!94;UBERON:0000956!6.97e-16!21;UBERON:0001869!6.97e-16!21;UBERON:0000203!6.97e-16!21;UBERON:0002021!8.42e-15!10;UBERON:0000411!8.42e-15!10;UBERON:0001950!8.42e-15!10;UBERON:0002619!2.80e-14!17;UBERON:0000025!1.82e-08!114;UBERON:0002240!2.03e-08!6;UBERON:0005174!2.03e-08!6;UBERON:0001137!2.03e-08!6;UBERON:0004111!2.38e-08!122;UBERON:0002298!2.57e-08!6;UBERON:0003076!3.74e-08!12;UBERON:0003057!3.74e-08!12;UBERON:0002420!2.31e-07!8;UBERON:0007245!2.31e-07!8;UBERON:0010009!2.31e-07!8;UBERON:0010011!2.31e-07!8;UBERON:0000454!2.31e-07!8;UBERON:0001948!3.27e-07!5;UBERON:0002315!3.27e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.86e-35,54;UBERON:0002021,4.93e-32,10;UBERON:0000411,4.93e-32,10;UBERON:0001950,4.93e-32,10;UBERON:0001049,1.52e-30,52;UBERON:0005068,1.52e-30,52;UBERON:0006241,1.52e-30,52;UBERON:0007135,1.52e-30,52;UBERON:0001017,3.16e-29,73;UBERON:0001016,2.56e-28,75;UBERON:0002020,2.71e-27,34;UBERON:0002346,5.94e-24,64;UBERON:0003075,5.94e-24,64;UBERON:0007284,5.94e-24,64;UBERON:0002619,1.26e-21,17;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0002616,4.80e-21,46;UBERON:0000955,1.63e-20,47;UBERON:0006238,1.63e-20,47;UBERON:0010371,2.00e-20,73;UBERON:0003080,1.19e-19,40;UBERON:0003528,2.35e-19,29;UBERON:0002791,2.35e-19,29;UBERON:0001893,2.35e-19,29;UBERON:0002780,6.41e-18,39;UBERON:0001890,6.41e-18,39;UBERON:0006240,6.41e-18,39;UBERON:0000956,4.30e-17,21;UBERON:0001869,4.30e-17,21;UBERON:0000203,4.30e-17,21;UBERON:0003056,2.18e-15,49;UBERON:0010314,3.09e-15,92;UBERON:0002240,7.27e-13,6;UBERON:0005174,7.27e-13,6;UBERON:0001137,7.27e-13,6;UBERON:0002950,2.19e-12,4;UBERON:0001891,2.19e-12,4;UBERON:0009616,2.19e-12,4;UBERON:0010286,2.19e-12,4;UBERON:0003076,1.13e-11,12;UBERON:0003057,1.13e-11,12;UBERON:0000025,2.23e-11,114;UBERON:0004684,2.32e-10,3;UBERON:0002275,2.32e-10,3;UBERON:0004111,2.55e-10,122;UBERON:0001948,3.40e-10,5;UBERON:0002315,3.40e-10,5;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0011216,7.98e-08,194;UBERON:0002256,2.60e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0,0.675029691658453,0.210324961351382,3.42781181284564,4.41737081903227,0.489963196859816,0.479227355091182,0,6.60695285996332,4.21368215681119,3.99376986466233,0.263772575460388,0.731901148819277,0,8.65467296904281,2.25105044012672,2.29197371665215,2.35702868378934,2.56269025438385,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,2.51336048176146,0,0,0,0,1.04853447583376,0.457500602818626,0.376963056338593,0.521472960576829,1.02286182932132,1.87009240103604,1.62241263067758,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0,0,0.861693590931196,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,15.1907328047368,6.30185064783336,4.98374228796694,2.05524755931193,6.0431511791176,8.10027000278167,5.85417564191487,9.06284817968409,8.80192529978094,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0.685738504770831,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Syp | |||
}} |
Revision as of 20:07, 14 September 2013
Short description: | p3@Syp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Syp_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 323bp_to_ENSMUST00000134355_5end |
EntrezGene: | Syp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.97e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-14 | 23 |
raphe nuclei neuron | 2.32e-10 | 3 |
neuron of the substantia nigra | 5.46e-10 | 3 |
neuron | 1.97e-09 | 33 |
neuronal stem cell | 1.97e-09 | 33 |
neuroblast | 1.97e-09 | 33 |
electrically signaling cell | 1.97e-09 | 33 |
electrically responsive cell | 1.14e-07 | 39 |
electrically active cell | 1.14e-07 | 39 |
neuron of the dorsal spinal cord | 2.60e-07 | 2 |
neural cell | 9.07e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.