FFCP PHASE1:Hg19::chr1:151431909..151431987,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23126 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18801 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z3K3,B4DTP8,B7ZBY5,B4DYL9,E9PM80 | |||
|association_with_transcript=0bp_to_ENST00000271715,ENST00000361398,NM_001194937,NM_001194938,NM_015100,NM_145796,uc001eyd.1,uc001eye.1,uc001eyf.1,uc001eyg.1,uc009wmv.1,uc010pdb.1,uc010pdc.1,uc010pdd.1_5end | |||
|description=CAGE_peak_1_at_POGZ_5end | |||
|id=chr1:151431909..151431987,- | |||
|ontology_enrichment_celltype=CL:0000037!7.50e-20!172;CL:0000566!7.50e-20!172;CL:0000988!2.59e-19!182;CL:0002032!7.08e-19!165;CL:0000837!7.08e-19!165;CL:0000738!1.23e-17!140;CL:0002087!3.04e-12!119;CL:0002031!3.92e-12!124;CL:0000763!1.07e-10!112;CL:0000049!1.07e-10!112;CL:0000542!1.49e-08!53;CL:0000051!1.49e-08!53;CL:0000860!1.91e-08!45;CL:0000838!2.58e-08!52;CL:0000766!3.54e-08!76;CL:0002057!3.67e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-08;33!CL:0002057;1.40e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.12e-20,168;CL:0000988,1.62e-19,177;CL:0002032,3.87e-19,161;CL:0000837,3.87e-19,161;CL:0000738,6.03e-18,136;CL:0002087,1.72e-12,115;CL:0002031,2.30e-12,120;CL:0000763,6.33e-11,108;CL:0000049,6.33e-11,108;CL:0000542,1.49e-08,53;CL:0000051,1.49e-08,53;CL:0000766,1.91e-08,72;CL:0000838,2.58e-08,52;CL:0000860,3.67e-08,42;CL:0002057,3.67e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.30e-13!94;UBERON:0001016!5.30e-13!94;UBERON:0001017!1.38e-12!82;UBERON:0005743!2.55e-12!86;UBERON:0001049!1.27e-11!57;UBERON:0005068!1.27e-11!57;UBERON:0006241!1.27e-11!57;UBERON:0007135!1.27e-11!57;UBERON:0000955!2.76e-11!69;UBERON:0006238!2.76e-11!69;UBERON:0007023!1.16e-10!115;UBERON:0002616!4.98e-10!59;UBERON:0003080!5.25e-10!42;UBERON:0002780!1.56e-09!41;UBERON:0001890!1.56e-09!41;UBERON:0006240!1.56e-09!41;UBERON:0002346!3.99e-09!90;UBERON:0001893!2.01e-08!34;UBERON:0001869!2.43e-08!32;UBERON:0002791!4.33e-08!33;UBERON:0002020!5.20e-08!34;UBERON:0003528!5.20e-08!34;UBERON:0003075!5.63e-08!86;UBERON:0007284!5.63e-08!86;UBERON:0001950!1.98e-07!20;UBERON:0002619!2.56e-07!22;UBERON:0000956!3.00e-07!25;UBERON:0000203!3.00e-07!25;UBERON:0003056!4.50e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.05e-07;20!UBERON:0001869;2.12e-07;32!UBERON:0002791;2.63e-07;32!UBERON:0002780;2.71e-07;41!UBERON:0001890;2.71e-07;41!UBERON:0001893;2.78e-07;34!UBERON:0002619;2.80e-07;22!UBERON:0000956;3.16e-07;25!UBERON:0000203;3.16e-07;25!UBERON:0000073;3.60e-07;53!UBERON:0002616;3.60e-07;53!UBERON:0003528;5.71e-07;34!UBERON:0002020;5.71e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.08e-13,89;UBERON:0001017,3.73e-12,81;UBERON:0001049,3.69e-11,56;UBERON:0005068,3.69e-11,56;UBERON:0006241,3.69e-11,56;UBERON:0007135,3.69e-11,56;UBERON:0000073,3.85e-11,53;UBERON:0002616,3.85e-11,53;UBERON:0000955,7.49e-11,68;UBERON:0006238,7.49e-11,68;UBERON:0007023,2.80e-10,114;UBERON:0002780,1.56e-09,41;UBERON:0001890,1.56e-09,41;UBERON:0003080,1.56e-09,41;UBERON:0006240,1.56e-09,41;UBERON:0002346,1.39e-08,86;UBERON:0001893,2.01e-08,34;UBERON:0001869,2.43e-08,32;UBERON:0002791,5.19e-08,32;UBERON:0003528,5.20e-08,34;UBERON:0002020,5.20e-08,34;UBERON:0003075,1.88e-07,82;UBERON:0007284,1.88e-07,82;UBERON:0001950,1.98e-07,20;UBERON:0002619,2.56e-07,22;UBERON:0000956,3.00e-07,25;UBERON:0000203,3.00e-07,25 | |||
|phase1_expression=2.90685406832891,6.63711624062048,2.96004248601539,3.00219895059391,5.36353313312745,2.61701557230111,5.06599756336621,3.15859936713415,8.09675447419499,4.42321085702716,9.07141518364156,8.08233076881637,10.8144461073666,4.20805600064159,5.96515276310248,4.70627602516243,7.23233433628772,4.38186054232424,4.39139518911456,10.0959267622966,11.6280394009224,15.6727360739044,10.304495536718,12.7293215317782,13.4330624366439,20.4787927404509,18.7189343945876,20.3860923602429,18.0947567350496,14.2016877295969,19.0423831678773,5.51652734687356,7.53014796945625,6.65557218300218,15.6483745172209,11.9422155289434,16.7352250420863,21.0518255242113,25.2686003812379,18.8799457522791,6.94137970143765,5.83008598834163,10.3030227053675,17.4477886535478,16.2486655786188,17.4660524055228,18.3618939155491,16.8578834088949,20.4406204790768,15.247696793074,12.0395532068677,10.4052181150977,12.4108445065183,14.846147722428,16.251178391321,16.9418105588344,18.2847120538757,10.562003768919,21.4258724659632,15.7255223267286,16.6227652707751,12.5343494070952,16.1565562673522,15.7703157697097,22.346111374401,19.8584828641899,28.0270012048009,23.6173745341339,14.6015217157656,13.6828972164223,23.005181100068,15.8359383474653,11.076183560431,6.76016916198214,7.86635909870661,7.54771123830153,12.8054639507004,12.6148589986865,18.3227168834671,8.55038231223746,9.54800050555633,6.75857368929146,17.5996244461323,8.19207916893197,6.22656477704488,14.5088275672612,12.0118796110804,13.2193061189531,15.2040320740518,12.4026988089597,25.0453706408157,24.0767247642085,27.9059456531417,33.0428321447565,16.2547483264645,11.0621315605532,20.064396551611,20.8295704257057,23.2329693869445,7.18901930179916,8.14805666583976,6.62826928028627,11.6896037044747,7.91014243884732,5.59751224202191,8.4182879941776,10.0197429593056,9.99112293860266,11.0550445425897,10.0307121808242,8.0141505157896,6.0858648004361,12.0112116161269,10.4340922954988,19.8617495229456,7.13848858994667,9.58051234004803,13.0578429283399,12.6509846009751,12.7426165729639,11.0684187155591,6.65316431113862,11.4437090499107,11.1348351704344,11.2437653897111,13.0227488624209,9.85353596305256,19.7574608360238,21.9300960542476,15.6410356193423,12.1903433156981,6.70700859703636,4.09160197899297,3.2529523714611,5.51471701699479,6.37324683427624,10.3387173116643,7.29952305453954,13.991152940282,9.97782288581538,13.1752178539689,14.4076983047484,5.82872461268068,4.07862887062872,5.19275829847493,8.88061660226263,10.3707209204715,8.82415309929765,6.86393892936153,8.91498003190956,7.55297147993479,11.1830497363796,13.8856200643038,13.5673906061762,13.0044825225071,12.9305479711832,11.4947231595246,10.3366703667732,12.4518191940349,13.3888245105868,6.44526907374635,5.32190474002959,16.1080957981792,6.98559852657151,19.4434067491622,12.7698611446234,12.3491154944393,16.779110592015,7.66583187329416,6.6448596169769,11.1753063797548,63.2546003693104,85.3116581126316,5.23312862571041,2.98183171017191,3.41902381494365,5.42877641334197,14.6286676581895,8.86670955495893,7.8494864019923,5.33744978648525,5.42668606517752,10.5811752035921,8.48677234039035,8.99040467124023,8.77873080340602,11.5235184896,11.481750159856,2.80944069147288,5.70471821544449,4.03511437489863,9.27732539285743,8.09364721840658,6.60118791500568,3.67477508258808,4.66770405784718,9.81594921169772,5.94001428641027,5.19260551484969,13.6524204290704,6.46756327634615,5.72342787443825,9.25877047052535,8.31192346452549,9.65750765937843,4.90380473278431,7.51190294532984,2.94923676216055,10.7633781413317,4.91181994282705,6.14602513362729,13.2040082277137,4.53431128649131,8.50213782150576,4.09457083929498,8.94514560878711,5.55390929418832,10.0973509697646,5.52299391853796,6.30419621593366,17.0404604407975,3.72782763442269,4.23901480776219,2.31913023795956,4.90943017063502,4.01526433544605,17.3202662704025,14.8433340520063,14.8728246872984,16.79309091249,9.33587148239825,9.12443397689575,7.8224766164908,11.5783368874719,11.0507937081984,5.57241513638375,2.16563844500876,9.22793040310782,7.41772636343647,8.67639707580535,7.279402200338,6.10062443458737,6.16903609688851,5.93257755904723,4.51309369788296,6.54070166808864,16.9775754563669,5.60967095213783,6.5851841813024,7.3504355692771,8.87285243752816,10.8110993834539,7.08947888017685,13.6853560818542,7.87126006675927,3.60292401626904,6.14601598288303,7.86812272803337,4.92591964816991,5.83307204498736,7.16778271682714,9.35941306751621,10.1031939417691,11.4771100925326,6.92711295991348,8.8063533134255,7.87075371380238,7.41991193714933,29.2375627244932,21.4621540523718,5.17055712783534,5.6161023633417,7.8774516013026,6.56136837907439,5.71139235876122,5.2456785979683,2.7763142037883,3.48760726216754,9.58456697913028,20.1991927537337,16.4650571604733,13.683655625691,17.4385143634523,22.9761228836011,6.66727890067775,12.6056180434232,8.20522130470329,17.1072446022705,8.53468189437585,6.30720421472227,7.71731368102561,10.2039286754278,12.2068819273318,5.20701829328745,6.20504235637333,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| |||
|short_description=p1@POGZ | |||
}} |
Revision as of 20:50, 10 January 2014
Short description: | p1@POGZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POGZ_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000271715, ENST00000361398, NM_001194937, NM_001194938, NM_015100, NM_145796, uc001eyd.1, uc001eye.1, uc001eyf.1, uc001eyg.1, uc009wmv.1, uc010pdb.1, uc010pdc.1, uc010pdd.1_5end |
EntrezGene: | POGZ |
HGNC: | 18801 |
UniProt: | Q7Z3K3B4DTP8B7ZBY5B4DYL9E9PM80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.12e-20 | 168 |
hematopoietic cell | 1.62e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.87e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.87e-19 | 161 |
leukocyte | 6.03e-18 | 136 |
nongranular leukocyte | 1.72e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.30e-12 | 120 |
myeloid cell | 6.33e-11 | 108 |
common myeloid progenitor | 6.33e-11 | 108 |
lymphocyte | 1.49e-08 | 53 |
common lymphoid progenitor | 1.49e-08 | 53 |
myeloid leukocyte | 1.91e-08 | 72 |
lymphoid lineage restricted progenitor cell | 2.58e-08 | 52 |
classical monocyte | 3.67e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.67e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.08e-13 | 89 |
central nervous system | 3.73e-12 | 81 |
neural tube | 3.69e-11 | 56 |
neural rod | 3.69e-11 | 56 |
future spinal cord | 3.69e-11 | 56 |
neural keel | 3.69e-11 | 56 |
regional part of nervous system | 3.85e-11 | 53 |
regional part of brain | 3.85e-11 | 53 |
brain | 7.49e-11 | 68 |
future brain | 7.49e-11 | 68 |
adult organism | 2.80e-10 | 114 |
regional part of forebrain | 1.56e-09 | 41 |
forebrain | 1.56e-09 | 41 |
anterior neural tube | 1.56e-09 | 41 |
future forebrain | 1.56e-09 | 41 |
neurectoderm | 1.39e-08 | 86 |
telencephalon | 2.01e-08 | 34 |
cerebral hemisphere | 2.43e-08 | 32 |
regional part of telencephalon | 5.19e-08 | 32 |
brain grey matter | 5.20e-08 | 34 |
gray matter | 5.20e-08 | 34 |
neural plate | 1.88e-07 | 82 |
presumptive neural plate | 1.88e-07 | 82 |
neocortex | 1.98e-07 | 20 |
regional part of cerebral cortex | 2.56e-07 | 22 |
cerebral cortex | 3.00e-07 | 25 |
pallium | 3.00e-07 | 25 |