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FFCP PHASE1:Hg19::chr1:161059154..161059172,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=81607|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19688|TSSclassifier=W|UniProt=|association_with_transcript=142bp_to_ENST00000460234_5end|coexpression_cluster_id=C433|description=CAGE_peak_6_at_PVRL4_5end|id=chr1:161059154..161059172,-|ontology_enrichment_celltype=CL:0002009!6.80e-17!65;CL:0002194!1.04e-15!63;CL:0000576!1.04e-15!63;CL:0000040!1.04e-15!63;CL:0000559!1.04e-15!63;CL:0000766!2.99e-15!76;CL:0000557!5.04e-15!71;CL:0000839!1.20e-13!70;CL:0000763!9.12e-11!112;CL:0000049!9.12e-11!112;CL:0000842!3.99e-10!3;CL:0000840!1.31e-09!5;CL:0001029!1.31e-09!5;CL:0000738!3.65e-09!140;CL:0000235!1.00e-08!10;CL:0002087!1.15e-08!119;CL:0002057!2.09e-08!42;CL:0000224!1.08e-07!4;CL:0000860!1.12e-07!45;CL:0000037!4.54e-07!172;CL:0000566!4.54e-07!172|ontology_enrichment_celltype_v019=CL:0000235;1.46e-91;6!CL:0000840;2.42e-33;5!CL:0000990;1.63e-22;8!CL:0000451;1.45e-18;10!CL:0000473;4.20e-18;39!CL:0000234;4.20e-18;39|ontology_enrichment_celltype_v019_2=CL:0000235,1.22e-91,6;CL:0000840,2.29e-33,5;CL:0001029,2.29e-33,5;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000990,1.57e-22,8;CL:0000451,1.40e-18,10;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177|ontology_enrichment_development_v019=CL:0000049;2.67e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.92e-13!102;UBERON:0003061!1.92e-13!102;UBERON:0002193!8.64e-13!112;UBERON:0002371!9.47e-13!80;UBERON:0001474!1.67e-11!86;UBERON:0002405!4.45e-09!115;UBERON:0004765!4.76e-09!101;UBERON:0001434!4.76e-09!101;UBERON:0003081!1.13e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.755751887377619,1.21292030593908,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.39303789839414,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,5.14809383306323,9.66102554876734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=81607
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=19688
|TSSclassifier=weak
|UniProt=
|association_with_transcript=142bp_to_ENST00000460234_5end
|coexpression_cluster_id=C433
|description=CAGE_peak_6_at_PVRL4_5end
|id=chr1:161059154..161059172,-
|ontology_enrichment_celltype=CL:0002009!6.80e-17!65;CL:0002194!1.04e-15!63;CL:0000576!1.04e-15!63;CL:0000040!1.04e-15!63;CL:0000559!1.04e-15!63;CL:0000766!2.99e-15!76;CL:0000557!5.04e-15!71;CL:0000839!1.20e-13!70;CL:0000763!9.12e-11!112;CL:0000049!9.12e-11!112;CL:0000842!3.99e-10!3;CL:0000840!1.31e-09!5;CL:0001029!1.31e-09!5;CL:0000738!3.65e-09!140;CL:0000235!1.00e-08!10;CL:0002087!1.15e-08!119;CL:0002057!2.09e-08!42;CL:0000224!1.08e-07!4;CL:0000860!1.12e-07!45;CL:0000037!4.54e-07!172;CL:0000566!4.54e-07!172
|ontology_enrichment_celltype_v019=CL:0000235;1.46e-91;6!CL:0000840;2.42e-33;5!CL:0000990;1.63e-22;8!CL:0000451;1.45e-18;10!CL:0000473;4.20e-18;39!CL:0000234;4.20e-18;39
|ontology_enrichment_celltype_v019_2=CL:0000235,1.22e-91,6;CL:0000840,2.29e-33,5;CL:0001029,2.29e-33,5;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000990,1.57e-22,8;CL:0000451,1.40e-18,10;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177
|ontology_enrichment_development_v019=CL:0000049;2.67e-07;108
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!1.92e-13!102;UBERON:0003061!1.92e-13!102;UBERON:0002193!8.64e-13!112;UBERON:0002371!9.47e-13!80;UBERON:0001474!1.67e-11!86;UBERON:0002405!4.45e-09!115;UBERON:0004765!4.76e-09!101;UBERON:0001434!4.76e-09!101;UBERON:0003081!1.13e-08!216
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.581592955118259,0.755751887377619,1.21292030593908,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.39303789839414,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,5.14809383306323,9.66102554876734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0.653150243690884,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0
|short_description=p6@PVRL4
}}

Revision as of 21:51, 10 January 2014

Short description:p6@PVRL4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_PVRL4_5end
Coexpression cluster:C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature
Association with transcript: 142bp_to_ENST00000460234_5end
EntrezGene:PVRL4
HGNC: 19688
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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