FFCP PHASE1:Hg19::chr11:45307817..45307898,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14962 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L8C5 | |||
|association_with_transcript=0bp_to_ENST00000020926,NM_001247987,NM_020826,uc001myq.2,uc009yku.1_5end | |||
|coexpression_cluster_id=C1635 | |||
|description=CAGE_peak_1_at_SYT13_5end | |||
|id=chr11:45307817..45307898,- | |||
|ontology_enrichment_celltype=CL:1000497!2.51e-09!18;CL:0002518!2.51e-09!18;CL:1000449!1.96e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.94e-12;17!CL:0002518;1.94e-12;17!CL:1000449;9.73e-10;15!CL:1000507;3.77e-09;10!CL:1000494;3.77e-09;10!CL:0000540;1.53e-07;6!CL:0000404;1.53e-07;6!CL:0002681;7.62e-07;12!CL:0002584;7.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.15e-12,17;CL:0002518,2.15e-12,17;CL:1000449,1.07e-09,15;CL:1000507,4.00e-09,10;CL:1000494,4.00e-09,10;CL:0000540,1.40e-07,6;CL:0000031,1.40e-07,6;CL:0000404,1.40e-07,6;CL:0000047,1.43e-07,8;CL:0002681,8.50e-07,12;CL:0002584,8.50e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.01e-11;82!CL:0000031;1.53e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.43e-47!82;UBERON:0005743!7.64e-47!86;UBERON:0000073!2.87e-45!94;UBERON:0001016!2.87e-45!94;UBERON:0001049!9.23e-44!57;UBERON:0005068!9.23e-44!57;UBERON:0006241!9.23e-44!57;UBERON:0007135!9.23e-44!57;UBERON:0002616!5.31e-39!59;UBERON:0000955!1.06e-38!69;UBERON:0006238!1.06e-38!69;UBERON:0007023!7.36e-37!115;UBERON:0002780!1.52e-34!41;UBERON:0001890!1.52e-34!41;UBERON:0006240!1.52e-34!41;UBERON:0003075!7.21e-34!86;UBERON:0007284!7.21e-34!86;UBERON:0002346!1.00e-33!90;UBERON:0003080!2.43e-33!42;UBERON:0001893!5.89e-29!34;UBERON:0002020!6.06e-29!34;UBERON:0003528!6.06e-29!34;UBERON:0002791!6.53e-28!33;UBERON:0001869!9.46e-28!32;UBERON:0003056!1.04e-26!61;UBERON:0002619!1.94e-24!22;UBERON:0000033!2.81e-23!123;UBERON:0000924!5.31e-23!173;UBERON:0006601!5.31e-23!173;UBERON:0004121!1.13e-22!169;UBERON:0000153!1.17e-22!129;UBERON:0007811!1.17e-22!129;UBERON:0001950!1.37e-22!20;UBERON:0000956!5.64e-22!25;UBERON:0000203!5.64e-22!25;UBERON:0000025!3.83e-19!194;UBERON:0004111!3.76e-14!241;UBERON:0000064!5.23e-13!219;UBERON:0000481!2.08e-12!347;UBERON:0000477!6.02e-12!286;UBERON:0003076!2.72e-11!15;UBERON:0003057!2.72e-11!15;UBERON:0000062!3.46e-11!511;UBERON:0000119!1.51e-10!312;UBERON:0000483!3.11e-10!309;UBERON:0000489!8.17e-10!32;UBERON:0000922!1.70e-09!612;UBERON:0000475!1.74e-09!365;UBERON:0001871!2.23e-09!7;UBERON:0004733!4.11e-09!12;UBERON:0002028!4.11e-09!12;UBERON:0007277!4.11e-09!12;UBERON:0002420!1.35e-08!9;UBERON:0007245!1.35e-08!9;UBERON:0010009!1.35e-08!9;UBERON:0010011!1.35e-08!9;UBERON:0000454!1.35e-08!9;UBERON:0002308!2.25e-08!9;UBERON:0000125!2.25e-08!9;UBERON:0002113!3.21e-08!27;UBERON:0003918!3.21e-08!27;UBERON:0005095!3.21e-08!27;UBERON:0007687!3.21e-08!27;UBERON:0004732!3.82e-08!13;UBERON:0006555!9.32e-08!17;UBERON:0005103!9.32e-08!17;UBERON:0000083!9.32e-08!17;UBERON:0009201!9.32e-08!17;UBERON:0004819!9.32e-08!17;UBERON:0006553!9.32e-08!17;UBERON:0003074!9.32e-08!17;UBERON:0003060!9.32e-08!17;UBERON:0000200!1.47e-07!6;UBERON:0000468!1.48e-07!659;UBERON:0004211!1.96e-07!16;UBERON:0001285!1.96e-07!16;UBERON:0007684!1.96e-07!16;UBERON:0003220!1.96e-07!16;UBERON:0004208!1.96e-07!16;UBERON:0003887!3.06e-07!21;UBERON:0002050!3.10e-07!605;UBERON:0005423!3.10e-07!605;UBERON:0000080!4.16e-07!18;UBERON:0002120!4.16e-07!18;UBERON:0004875!4.16e-07!18;UBERON:0005721!4.16e-07!18;UBERON:0005754!4.16e-07!18;UBERON:0007297!4.16e-07!18;UBERON:0001894!6.08e-07!7;UBERON:0006222!6.08e-07!7;UBERON:0000923!6.16e-07!604;UBERON:0005291!6.16e-07!604;UBERON:0006598!6.16e-07!604;UBERON:0002532!6.16e-07!604;UBERON:0002680!8.62e-07!9;UBERON:0001895!8.62e-07!9;UBERON:0010092!8.62e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.62e-34;22!UBERON:0001869;2.72e-33;32!UBERON:0003528;1.03e-31;34!UBERON:0002020;1.03e-31;34!UBERON:0001893;1.14e-31;34!UBERON:0001950;3.15e-31;20!UBERON:0002791;5.40e-31;32!UBERON:0002780;5.96e-31;41!UBERON:0001890;5.96e-31;41!UBERON:0000956;5.96e-29;25!UBERON:0000203;5.96e-29;25!UBERON:0000073;1.49e-28;53!UBERON:0002616;1.49e-28;53!UBERON:0000955;2.74e-19;68!UBERON:0001017;3.38e-19;75!UBERON:0001016;7.37e-17;83!UBERON:0000489;5.82e-12;29!UBERON:0001871;3.08e-11;6!UBERON:0002113;1.43e-10;24!UBERON:0011143;1.43e-10;24!UBERON:0000200;5.10e-10;6!UBERON:0011216;5.99e-10;132!UBERON:0007023;7.03e-10;114!UBERON:0006555;9.73e-10;15!UBERON:0004819;9.73e-10;15!UBERON:0001285;9.73e-10;15!UBERON:0007684;9.73e-10;15!UBERON:0002420;1.80e-09;9!UBERON:0007245;1.80e-09;9!UBERON:0010009;1.80e-09;9!UBERON:0010011;1.80e-09;9!UBERON:0000454;1.80e-09;9!UBERON:0000125;3.41e-09;9!UBERON:0002308;3.41e-09;9!UBERON:0004211;3.77e-09;10!UBERON:0009773;3.77e-09;10!UBERON:0001231;3.77e-09;10!UBERON:0004810;3.77e-09;10!UBERON:0004733;4.69e-09;12!UBERON:0002028;4.69e-09;12!UBERON:0002298;7.68e-09;6!UBERON:0002021;8.71e-09;5!UBERON:0001872;1.02e-08;5!UBERON:0005409;1.35e-08;22!UBERON:0000349;2.20e-08;5!UBERON:0004732;3.44e-08;13!UBERON:0000922;3.57e-08;49!UBERON:0002108;1.19e-07;4!UBERON:0006554;1.22e-07;30!UBERON:0001008;1.22e-07;30!UBERON:0000160;2.34e-07;17!UBERON:0001894;3.17e-07;7!UBERON:0001225;7.62e-07;12!UBERON:0008987;7.62e-07;12!UBERON:0009663;7.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-53,56;UBERON:0005068,1.03e-53,56;UBERON:0006241,1.03e-53,56;UBERON:0007135,1.03e-53,56;UBERON:0001017,2.26e-53,81;UBERON:0000073,2.12e-50,53;UBERON:0002616,2.12e-50,53;UBERON:0001016,1.49e-49,89;UBERON:0002780,1.34e-42,41;UBERON:0001890,1.34e-42,41;UBERON:0003080,1.34e-42,41;UBERON:0006240,1.34e-42,41;UBERON:0000955,1.91e-41,68;UBERON:0006238,1.91e-41,68;UBERON:0001869,4.18e-37,32;UBERON:0001893,9.52e-37,34;UBERON:0003528,9.90e-37,34;UBERON:0002020,9.90e-37,34;UBERON:0003075,2.30e-34,82;UBERON:0007284,2.30e-34,82;UBERON:0002791,3.11e-34,32;UBERON:0002619,7.59e-34,22;UBERON:0002346,1.23e-33,86;UBERON:0001950,3.14e-31,20;UBERON:0011216,2.53e-30,223;UBERON:0007023,2.55e-30,114;UBERON:0000956,5.94e-29,25;UBERON:0000203,5.94e-29,25;UBERON:0010371,2.87e-26,104;UBERON:0003056,4.02e-26,61;UBERON:0004121,9.86e-23,171;UBERON:0000924,9.86e-23,171;UBERON:0006601,9.86e-23,171;UBERON:0000025,1.70e-22,192;UBERON:0010314,1.46e-19,132;UBERON:0004111,1.42e-15,240;UBERON:0003076,4.89e-12,15;UBERON:0003057,4.89e-12,15;UBERON:0001871,3.06e-11,6;UBERON:0000483,6.48e-11,306;UBERON:0000922,7.19e-11,592;UBERON:0000489,7.75e-11,31;UBERON:0000119,1.32e-10,309;UBERON:0000200,5.06e-10,6;UBERON:0004211,1.07e-09,15;UBERON:0009773,1.07e-09,15;UBERON:0001231,1.07e-09,15;UBERON:0001285,1.07e-09,15;UBERON:0007684,1.07e-09,15;UBERON:0004208,1.07e-09,15;UBERON:0002420,1.80e-09,9;UBERON:0007245,1.80e-09,9;UBERON:0010009,1.80e-09,9;UBERON:0010011,1.80e-09,9;UBERON:0000454,1.80e-09,9;UBERON:0002113,2.08e-09,26;UBERON:0003918,2.08e-09,26;UBERON:0011143,2.08e-09,26;UBERON:0005095,2.08e-09,26;UBERON:0007687,2.08e-09,26;UBERON:0000125,3.41e-09,9;UBERON:0002308,3.41e-09,9;UBERON:0004810,4.00e-09,10;UBERON:0004733,4.53e-09,12;UBERON:0002028,4.53e-09,12;UBERON:0007277,4.53e-09,12;UBERON:0006555,6.44e-09,16;UBERON:0004819,6.44e-09,16;UBERON:0002298,7.47e-09,6;UBERON:0002021,8.65e-09,5;UBERON:0001872,1.03e-08,5;UBERON:0000349,2.20e-08,5;UBERON:0005423,2.54e-08,581;UBERON:0004732,3.33e-08,13;UBERON:0002108,1.21e-07,4;UBERON:0000160,2.26e-07,17;UBERON:0001894,3.29e-07,7;UBERON:0006222,3.29e-07,7;UBERON:0005409,3.33e-07,25;UBERON:0009663,7.80e-07,7;UBERON:0001225,8.50e-07,12;UBERON:0008987,8.50e-07,12 | |||
|phase1_expression=0,0,0,0,0,2.61701557230111,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.351339142772504,11.5916481815476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.83052754325734,2.38553582978673,5.80969714347592,6.84162963101445,3.28017106138317,4.74470566798579,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,1.22988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,23.4251736943719,4.63973287666617,28.9803139028423,5.10351001322531,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,2.96836132889982,0,0,0,0,0,3.38406458856542,0,0,0,0,0,3.15839729035188,4.62092022626489,6.27479815341484,5.84556898613043,10.5551628892876,1.13733384070897,0,2.59099099322567,4.62681758070868,0.812839312631559,1.50506932156456,8.15604073744123,4.15538004464362,4.02974558499921,0,0,0.512900250232778,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,62.6313018092768,38.965428345712,0,0,0.422250816255987,0.398495976502139,0.552567831062295,8.56571342704538,0.306806047506464,0,0,1.70749867179921,0,0,0,0,0,82.3932834180936,70.503754603007,163.683314360979,0,0,0,0,0,0,14.4792216761415,0.874813840149763,0.694499979733169,4.42870692906919,10.0095044059089,27.464712537075,24.9909127444568,55.5629523632669,71.958410266503,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,2.96841450011276,0,9.95261931078505,7.43043541828049,21.3860550726769,0,0,0,5.72909630335755,0,31.6257001729208,0,0,0,0,8.46935012340647,126.101977791762,1.13735843331278,0,0.207376382794494,0,0,0,0,1.13843818411917,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,12.6549214837098,0,0,83.6968722536716,1.95551382734803,0.160317640503067,50.3749067584872,1.39866726707491,0,0,1.37275998289572,1.00838358591705,0,0,0,0,0,0,6.60462317580768,2.73810757783986,0,0,0,1.67569440763353,0,0,0.199679000498991,0,0.446342914883745,0.201550417460179,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0,46.1233220089396,15.1185780783849,3.69732241469544,4.53880140770872,2.9080823662043,0,0,90.5775889771148,0,7.95937643721902,7.97309739651971,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0.906496732161005,0,0,18.3581798033402,17.3224708282924,6.67238667748885,0,0.747511887973863,4.40172054279065,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,52.2780226180522,57.1082919741188,32.1740691915705,4.58727356552057,9.87268558677985,19.8708489412427,0.138348634936231,0,0,0,0,25.7584198193785,28.2596005791109,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,25.8543275603737,0,0,0,0,0,20.7085880891455,0,0,0,0,0,0,0,0.639471856518258,1.94084660514027,0,9.3920288845132,0,24.0209659714902,0.123935764259002,0.558644917973244,0,0,108.077051018538,0,0,51.7045262026499,39.6750413711638,18.5175276506295,98.4558548355624,134.102142389954,96.2668954301913,50.8648283740331,0,0,0,0,0,0,0,0,0.150420656698515,2.62216589314576,2.34454203369928,0,0,11.0892064662784,81.8555525574943,25.775577254257,34.3100082191966,77.7477832977298,106.660087758553,2.74128883428591,0,0,0,5.35701835878287,0.672567444437648,24.8855897737019,23.4492057091837,0,0,6.34505634918448,92.3028973825375,82.347512500687,0.118193840883968,0,0.627944742804112,11.3123224739521,0,11.8710633666234,165.832390055901,182.501144772853,5.21778772489591,0.94808167039636,0,0.173858272302579,0,0,0,0,0,0,0,0,1.60374807980835,0,0,5.36906072629403,17.0781406490523,63.8849926907092,0,0,0,0,42.109103423179,8.95278488226157,2.02164154321867,0,4.06779911958088,118.505832199839,5.55653938377201,9.83518022267808,122.282497053996,0,131.507513282707,4.71140321075869,3.26751040359795,19.4421634688364,0,0.0939839179798536,0.644578879735772,0,0,0,0,2.19100916473955,1.37618785021362,0.716697915757256,0,86.2132095620798,138.3231688379,14.2837246939158,0,0,0,0.1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| |||
|short_description=p1@SYT13 | |||
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Revision as of 07:27, 11 January 2014
Short description: | p1@SYT13 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT13_5end |
Coexpression cluster: | C1635_brain_smallcell_occipital_somatostatinoma_temporal_duodenum_small |
Association with transcript: | 0bp_to_ENST00000020926, NM_001247987, NM_020826, uc001myq.2, uc009yku.1_5end |
EntrezGene: | SYT13 |
HGNC: | 14962 |
UniProt: | Q7L8C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.15e-12 | 17 |
kidney epithelial cell | 2.15e-12 | 17 |
epithelial cell of nephron | 1.07e-09 | 15 |
kidney tubule cell | 4.00e-09 | 10 |
nephron tubule epithelial cell | 4.00e-09 | 10 |
neuron | 1.40e-07 | 6 |
neuroblast | 1.40e-07 | 6 |
electrically signaling cell | 1.40e-07 | 6 |
neuronal stem cell | 1.43e-07 | 8 |
kidney cortical cell | 8.50e-07 | 12 |
renal cortical epithelial cell | 8.50e-07 | 12 |